I tried to echo but it returns nothing.
[pmdtest@pmd02 d00_dayfiles]$ echo ${MPIRUN} -np ${NPROC} -hostfile
$i{ABSDIR}/hostlist -mca btl sm,openib,self --mca btl_openib_use_srq 1
./hrm >> ${OUTFILE}_hrm 2>&1
[pmdtest@pmd02 d00_dayfiles]$
On Wed, Feb 29, 2012 at 12:01 PM, Jingcha Joba <pukkimon...@gmail.com>wrote:
> Just to be sure, can u try
> echo "${MPIRUN} -np ${NPROC} -hostfile ${ABSDIR}/hostlist -mca btl
> sm,openib,self --mca btl_openib_use_srq 1 ./hrm >> ${OUTFILE}_hrm 2>&1"
> and check if you are indeed getting the correct argument.
>
> If that looks fine, can u add --mca btl_openib_verbose 1 to the mpirun
> argument list, and see what it says?
>
>
>
> On Tue, Feb 28, 2012 at 10:15 PM, Syed Ahsan Ali <ahsansha...@gmail.com>wrote:
>
>> After creating new hostlist and making the scripts again it is working
>> now and picking up the hostlist as u can see :
>>
>> *
>> ${MPIRUN} -np ${NPROC} -hostfile ${ABSDIR}/hostlist -mca btl
>> sm,openib,self --mca btl_openib_use_srq 1 ./hrm >> ${OUTFILE}_hrm 2>&1
>> (The above command is used to submit job)*
>>
>> *
>> [pmdtest@pmd02 d00_dayfiles]$ tail -f *_hrm
>> mpirun -np 32 /home/MET/hrm/bin/hrm
>> *
>> but it just stays on this command and the model simulation don't start
>> further. I can't understand this behavior because the simulation works
>> fine when hostlist is not given as follows:
>>
>> * ${MPIRUN} -np ${NPROC} ./hrm >> ${OUTFILE}_hrm 2>&1*
>>
>> **
>> **
>> * *
>>
>> On Tue, Feb 28, 2012 at 3:49 PM, Jeffrey Squyres <jsquy...@cisco.com>wrote:
>>
>>> Yes, this is known behavior for our CLI parser. We could probably
>>> improve that a bit...
>>>
>>> On Feb 28, 2012, at 4:55 AM, Ralph Castain wrote:
>>>
>>> >
>>> > On Feb 28, 2012, at 2:52 AM, Reuti wrote:
>>> >
>>> >> Am 28.02.2012 um 10:21 schrieb Ralph Castain:
>>> >>
>>> >>> Afraid I have to agree with the prior reply - sounds like NPROC
>>> isn't getting defined, which causes your cmd line to look like your
>>> original posting.
>>> >>
>>> >> Maybe the best to investigate this is to `echo` $MPIRUN and $NPROC.
>>> >>
>>> >> But: is this the intended behavior of mpirun? It looks like -np is
>>> eating -hostlist as a numeric argument? Shouldn't it complain about:
>>> argument for -np missing or argument not being numeric?
>>> >
>>> > Probably - I'm sure that the atol is returning zero, which should
>>> cause an error output. I'll check.
>>> >
>>> >
>>> >>
>>> >> -- Reuti
>>> >>
>>> >>
>>> >>>
>>> >>> On Feb 27, 2012, at 10:29 PM, Syed Ahsan Ali wrote:
>>> >>>
>>> >>>> The following command in used in script for job submission
>>> >>>>
>>> >>>> ${MPIRUN} -np ${NPROC} -hostfile ${ABSDIR}/hostlist -mca btl
>>> sm,openib,self --mca btl_openib_use_srq 1 ./hrm >> ${OUTFILE}_hrm 2>&1
>>> >>>> where NPROC in defined in someother file. The same application is
>>> running on the other system with same configuration.
>>> >>>>
>>> >>>> On Tue, Feb 28, 2012 at 10:12 AM, PukkiMonkey <
>>> pukkimon...@gmail.com> wrote:
>>> >>>> No of processes missing after -np
>>> >>>> Should be something like:
>>> >>>> mpirun -np 256 ./exec
>>> >>>>
>>> >>>>
>>> >>>>
>>> >>>> Sent from my iPhone
>>> >>>>
>>> >>>> On Feb 27, 2012, at 8:47 PM, Syed Ahsan Ali <ahsansha...@gmail.com>
>>> wrote:
>>> >>>>
>>> >>>>> Dear All,
>>> >>>>>
>>> >>>>> I am running an application with mpirun but it gives following
>>> error, it is not picking up hostlist, there are other applications which
>>> run well with hostlist but it just gives following error with
>>> >>>>>
>>> >>>>>
>>> >>>>> [pmdtest@pmd02 d00_dayfiles]$ tail -f *_hrm
>>> >>>>> mpirun -np /home/MET/hrm/bin/hrm
>>> >>>>>
>>> --------------------------------------------------------------------------
>>> >>>>> Could not execute the executable "/home/MET/hrm/bin/hostlist":
>>> Exec format error
>>> >>>>>
>>> >>>>> This could mean that your PATH or executable name is wrong, or
>>> that you do not
>>> >>>>> have the necessary permissions. Please ensure that the executable
>>> is able to be
>>> >>>>> found and executed.
>>> >>>>>
>>> >>>>>
>>> --------------------------------------------------------------------------
>>> >>>>>
>>> >>>>> Following the permission of the hostlist directory. Please help me
>>> to remove this error.
>>> >>>>>
>>> >>>>> [pmdtest@pmd02 bin]$ ll
>>> >>>>> total 7570
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 2517815 Feb 16 2012 gme2hrm
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 0 Feb 16 2012 gme2hrm.map
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 473 Jan 30 2012 hostlist
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 5197698 Feb 16 2012 hrm
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 0 Dec 31 2010 hrm.map
>>> >>>>> -rwxrwxrwx 1 pmdtest pmdtest 1680 Dec 31 2010 mpd.hosts
>>> >>>>>
>>> >>>>>
>>> >>>>> Thank you and Regards
>>> >>>>> Ahsan
>>> >>>>>
>>> >>>>>
>>> >>>>>
>>> >>>>>
>>> >>>>>
>>> >>>>> _______________________________________________
>>> >>>>> users mailing list
>>> >>>>> us...@open-mpi.org
>>> >>>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>> >>>>
>>> >>>> _______________________________________________
>>> >>>> users mailing list
>>> >>>> us...@open-mpi.org
>>> >>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>> >>>>
>>> >>>>
>>> >>>>
>>> >>>> --
>>> >>>> Syed Ahsan Ali Bokhari
>>> >>>> Electronic Engineer (EE)
>>> >>>>
>>> >>>> Research & Development Division
>>> >>>> Pakistan Meteorological Department H-8/4, Islamabad.
>>> >>>> Phone # off +92518358714
>>> >>>> Cell # +923155145014
>>> >>>>
>>> >>>> _______________________________________________
>>> >>>> users mailing list
>>> >>>> us...@open-mpi.org
>>> >>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>> >>>
>>> >>> _______________________________________________
>>> >>> users mailing list
>>> >>> us...@open-mpi.org
>>> >>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>> >>
>>> >>
>>> >> _______________________________________________
>>> >> users mailing list
>>> >> us...@open-mpi.org
>>> >> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>> >
>>> >
>>> > _______________________________________________
>>> > users mailing list
>>> > us...@open-mpi.org
>>> > http://www.open-mpi.org/mailman/listinfo.cgi/users
>>>
>>>
>>> --
>>> Jeff Squyres
>>> jsquy...@cisco.com
>>> For corporate legal information go to:
>>> http://www.cisco.com/web/about/doing_business/legal/cri/
>>>
>>>
>>> _______________________________________________
>>> users mailing list
>>> us...@open-mpi.org
>>> http://www.open-mpi.org/mailman/listinfo.cgi/users
>>>
>>
>>
>>
>> --
>> Syed Ahsan Ali Bokhari
>> Electronic Engineer (EE)
>>
>> Research & Development Division
>> Pakistan Meteorological Department H-8/4, Islamabad.
>> Phone # off +92518358714
>> Cell # +923155145014
>>
>>
>
--
Syed Ahsan Ali Bokhari
Electronic Engineer (EE)
Research & Development Division
Pakistan Meteorological Department H-8/4, Islamabad.
Phone # off +92518358714
Cell # +923155145014
