Dear Hideaki, please keep us posted if you succeed to run or not so we can internally track the problem and notify future users if a bug exist.
Thanks, Filippo On Jan 26, 2015, at 8:16 AM, Hideaki Kuraishi <[email protected]> wrote: > Dear Filippo, Fabio > > Thank you for the comment. > Yes, core file is generated and will analyze this. > > So far I have tried your suggestions but situation didn’t change and the same > error > occurred. Even when I used older versions of Intel compiler, v13 and 14, > the error was reproduced. I will try this on more using another system this > week. > > Best regards > Kai > > > From: [email protected] [mailto:[email protected]] On > Behalf Of Filippo Spiga > Sent: Sunday, January 25, 2015 11:07 PM > To: PWSCF Forum > Cc: <[email protected]> > Subject: Re: [Pw_forum] Build QE for Intel Phi native run > > Dear Hideaki, > , > Fabio Affinito can advise for the Intel Phi part however I do suggest to run > configure in this way: > > ./configure --enable-openmp --enable-parallel --with-scalapack=intel > > and only after edit the make.sys to eventually modify the libraries patch and > names. The configure should be able to pickup MKL and ScaLAPACK if the > environment is set correctly. > > The problem you see is additional to the one I noticed while ago with the > latest 15.x Intel compiler. If you can systematically reproduce this compiler > seg fault then it is worth to file a bug report to Intel. It mention a core > file... do you have one in the PW/src directory? > > F > > On Jan 23, 2015, at 3:59 PM, Hideaki Kuraishi > <[email protected]> wrote: > > Hello, > > I have been trying to build QE 5.0.2 with Intel Compiler 15.0.0 and Intel MPI > 5.0 to run in native mode. However, though configure is fine, it fails at > make phase with segmentation fault error as follows. > > -------------------------------------- > : > mpiifort -openmp -o bands_FS.x bands_FS.o -L$MKLROOT/lib/mic > -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -liopm5 > $MKLROOT/lib/mic/libmkl_lapack95_lp64.a -liomp5 > $HOME/mkl/lib/libfftw3xf_intel.a -L$MKLROOT/lib/mic -lmkl_intel_lp64 -liomp5 > > /opt/intel/impi/5.0.0.028/intel64/bin/mpiifort: line 729: 5630 Segmentation > fault (core dumped) $Show $FC $FCFLAGS "${allargs[@]}" $FCMODDIRS > $FCINCDIRS -L${libdir}${MPILIBDIR} -L$libdir $rpath_opt $mpilibs > $I_MPI_OTHERLIBS $LDFLAGS $MPI_OTHERLIBS > > ( cd ../../bin ; ln -fs ../PW/tools/bands_FS.x . ) > > mpiifort -openmp -o kvecs_FS.x kvecs_FS.o -L$MKLROOT/lib/mic > -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -liopm5 > $MKLROOT/lib/mic/libmkl_lapack95_lp64.a -liomp5 > $HOME/mkl/lib/libfftw3xf_intel.a -L$MKLROOT/lib/mic -lmkl_intel_lp64 -liomp5 > > /opt/intel/impi/5.0.0.028/intel64/bin/mpiifort: line 729: 5656 Segmentation > fault (core dumped) $Show $FC $FCFLAGS "${allargs[@]}" $FCMODDIRS > $FCINCDIRS -L${libdir}${MPILIBDIR} -L$libdir $rpath_opt $mpilibs > $I_MPI_OTHERLIBS $LDFLAGS $MPI_OTHERLIBS > > ( cd ../../bin ; ln -fs ../PW/tools/kvecs_FS.x . ) > : > -------------------------------------- > > If someone has experienced the same error, could you please share the > information on how to solve this? > > My procedure is... > > (1) Configure > export CC=mpicc > export FC=mpiifort > export F90=$FC > export MPIF90=$FC > export AR="xiar" > export CFLAGS="-mmic -openmp" > export FFLAGS=$CFLAGS > export FCFLAGS=$CFLAGS > export BLAS_LIBS="-L$MKLROOT/lib/mic -lmkl_intel_lp64 -liomp5" > export LAPACK_LIBS="$MKLROOT/lib/mic/libmkl_lapack95_lp64.a -liomp5" > export SCALAPACK_LIBS="-L$MKLROOT/lib/mic -lmkl_scalapack_lp64 > -lmkl_blacs_intelmpi_lp64 -liopm5" > > $ ./configure --enable-openmp --enable-parallel > > (2) Build > $ make pw 2>&1 | tee LOG.make > > Best regards > Kai > > ______________________________________________________________________ > > Fujitsu Laboratories of Europe Limited > Hayes Park Central, Hayes End Road, Hayes, Middlesex, UB4 8FE > Registered No. 4153469 > > This e-mail and any attachments are for the sole use of addressee(s) and > may contain information which is privileged and confidential. 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The fact that this > e-mail has been scanned by Trendmicro Interscan does not guarantee that > it has not been intercepted or amended nor that it is virus-free. > > _______________________________________________ > Pw_forum mailing list > [email protected] > http://pwscf.org/mailman/listinfo/pw_forum -- Mr. Filippo SPIGA, M.Sc. http://filippospiga.info ~ skype: filippo.spiga «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert ***** Disclaimer: "Please note this message and any attachments are CONFIDENTIAL and may be privileged or otherwise protected from disclosure. The contents are not to be disclosed to anyone other than the addressee. Unauthorized recipients are requested to preserve this confidentiality and to advise the sender immediately of any error in transmission." _______________________________________________ Pw_forum mailing list [email protected] http://pwscf.org/mailman/listinfo/pw_forum
