Dear Filippo, Yes, sure. What I did is as follows,
[Compiler and MPI Version] Intel compiler : composer_xe_2013_sp1.3.174 Intel MPI : 5.0.0.028 [Machine environment] CentOS Linux release 7.0.1406 (Core) [Procedure] 1) Configure $ export FC=mpiifort $ export F90=$FC $ export F77=$FC $ export MPIF90=$FC $ export FCFLAGS="-mmic -openmp -mkl" $ export FFLAGS=$FCFLAGS $ export CC=mpiicc $ export CPP="icc -E" $ export CFLAGS=$FCFLAGS $ export AR=xiar $ ./configure --enable-openmp --enable-parallel --with-internal-blas --with-internal-lapack --without-scalapack 2) Build 2-1) Compile internal BLAS $ vi make.inc FORTRAN = mpiifort OPTS = -mmic -openmp -mkl DRVOPTS = $(OPTS) NOOPT = -mmic -openmp -mkl LOADER = mpiifort LOADOPTS = $ make 2-2) Compile internal LAPACK $ vi make.inc FORTRAN = mpiifort OPTS = -mmic -openmp -mkl DRVOPTS = -mmic -openmp -mkl NOOPT = -mmic -openmp LOADER = mpiifort LOADOPTS = -mmic -openmp BLASLIB = $HOME/espresso-5.0.2/BLAS/blas.a $ make 2-3) Modify "make.sys" $ vi make.sys CFLAGS = -mmic -openmp -mkl $(DFLAGS) $(IFLAGS) F90FLAGS = $(FFLAGS) -nomodule -openmp -fpp $(FDFLAGS) $(IFLAGS) $(MODFLAGS) FFLAGS = -mmic -openmp -mkl FFLAGS_NOOPT = LDFLAGS = -static-intel -mmic -openmp BLAS_LIBS = $HOME/espresso-5.0.2/BLAS/blas.a BLAS_LIBS_SWITCH = internal LAPACK_LIBS = $HOME/espresso-5.0.2/lapack-3.2/lapack.a LAPACK_LIBS_SWITCH = internal LAPACK_LIBS = $HOME/espresso-5.0.2/lapack-3.2/lapack.a LAPACK_LIBS_SWITCH = internal FFT_LIBS = MPI_LIBS = -L/opt/intel/impi/5.0.0/mic/lib –lmpi_mt -ltmi $ make all 2>&1 | tee LOG.make 3) Run $ $QE_DIR/pw.x -inp ausurf.in Hope this is helpful... Best regards Kai > -----Original Message----- > From: Filippo Spiga [mailto:[email protected]] > Sent: Friday, February 06, 2015 4:31 PM > To: Hideaki Kuraishi > Cc: <[email protected]>; PWSCF Forum > Subject: Re: [Pw_forum] Build QE for Intel Phi native run > > Dear Hideaki, > > can you share information about compiler versions, flags, changes in the > make.sys so we can add in the regular distribution instructions how to > get up&running on Intel Phi? We will acknowledge you for the help :-) > > Thanks in advance. > > Regards, > Filippo > > On Feb 6, 2015, at 8:18 AM, Hideaki Kuraishi > <[email protected]> wrote: > > Hi Filippo, > > > > Thanks to the comment below, > > I now able to compile and run the code. > > Thanks a lot for the advice! > > > > Best regards > > Kai > > > >> -----Original Message----- > >> From: [email protected] > [mailto:[email protected]] > >> On Behalf Of Filippo Spiga > >> Sent: Friday, February 06, 2015 4:03 PM > >> To: PWSCF Forum > >> Cc: <[email protected]> > >> Subject: Re: [Pw_forum] Build QE for Intel Phi native run > >> > >> Dear Hideaki, > >> > >> please keep us posted if you succeed to run or not so we can > >> internally track the problem and notify future users if a bug exist. > >> > >> Thanks, > >> Filippo > >> > >> On Jan 26, 2015, at 8:16 AM, Hideaki Kuraishi > >> <[email protected]> wrote: > >>> Dear Filippo, Fabio > >>> > >>> Thank you for the comment. > >>> Yes, core file is generated and will analyze this. > >>> > >>> So far I have tried your suggestions but situation didn’t change and > >>> the same error occurred. Even when I used older versions of Intel > >>> compiler, v13 and 14, the error was reproduced. I will try this on > >>> more > >> using another system this week. > >>> > >>> Best regards > >>> Kai > >>> > >>> > >>> From: [email protected] > [mailto:[email protected]] > >>> On Behalf Of Filippo Spiga > >>> Sent: Sunday, January 25, 2015 11:07 PM > >>> To: PWSCF Forum > >>> Cc: <[email protected]> > >>> Subject: Re: [Pw_forum] Build QE for Intel Phi native run > >>> > >>> Dear Hideaki, > >>> , > >>> Fabio Affinito can advise for the Intel Phi part however I do > >>> suggest > >> to run configure in this way: > >>> > >>> ./configure --enable-openmp --enable-parallel > --with-scalapack=intel > >>> > >>> and only after edit the make.sys to eventually modify the libraries > >> patch and names. The configure should be able to pickup MKL and > >> ScaLAPACK if the environment is set correctly. > >>> > >>> The problem you see is additional to the one I noticed while ago > >>> with > >> the latest 15.x Intel compiler. If you can systematically reproduce > >> this compiler seg fault then it is worth to file a bug report to > >> Intel. It mention a core file... do you have one in the PW/src directory? > >>> > >>> F > >>> > >>> On Jan 23, 2015, at 3:59 PM, Hideaki Kuraishi > >> <[email protected]> wrote: > >>> > >>> Hello, > >>> > >>> I have been trying to build QE 5.0.2 with Intel Compiler 15.0.0 and > >> Intel MPI 5.0 to run in native mode. However, though configure is > >> fine, it fails at make phase with segmentation fault error as follows. > >>> > >>> -------------------------------------- > >>> : > >>> mpiifort -openmp -o bands_FS.x bands_FS.o -L$MKLROOT/lib/mic > >>> -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -liopm5 > >>> $MKLROOT/lib/mic/libmkl_lapack95_lp64.a -liomp5 > >>> $HOME/mkl/lib/libfftw3xf_intel.a -L$MKLROOT/lib/mic > -lmkl_intel_lp64 > >>> -liomp5 > >>> > >>> /opt/intel/impi/5.0.0.028/intel64/bin/mpiifort: line 729: 5630 > >> Segmentation fault (core dumped) $Show $FC $FCFLAGS > >> "${allargs[@]}" $FCMODDIRS $FCINCDIRS -L${libdir}${MPILIBDIR} > >> -L$libdir $rpath_opt $mpilibs $I_MPI_OTHERLIBS $LDFLAGS > >> $MPI_OTHERLIBS > >> > >>> > >>> ( cd ../../bin ; ln -fs ../PW/tools/bands_FS.x . ) > >>> > >>> mpiifort -openmp -o kvecs_FS.x kvecs_FS.o -L$MKLROOT/lib/mic > >>> -lmkl_scalapack_lp64 -lmkl_blacs_intelmpi_lp64 -liopm5 > >>> $MKLROOT/lib/mic/libmkl_lapack95_lp64.a -liomp5 > >>> $HOME/mkl/lib/libfftw3xf_intel.a -L$MKLROOT/lib/mic > -lmkl_intel_lp64 > >>> -liomp5 > >>> > >>> /opt/intel/impi/5.0.0.028/intel64/bin/mpiifort: line 729: 5656 > >> Segmentation fault (core dumped) $Show $FC $FCFLAGS > >> "${allargs[@]}" $FCMODDIRS $FCINCDIRS -L${libdir}${MPILIBDIR} > >> -L$libdir $rpath_opt $mpilibs $I_MPI_OTHERLIBS $LDFLAGS > >> $MPI_OTHERLIBS > >> > >>> > >>> ( cd ../../bin ; ln -fs ../PW/tools/kvecs_FS.x . ) > >>> : > >>> -------------------------------------- > >>> > >>> If someone has experienced the same error, could you please share > >>> the > >> information on how to solve this? > >>> > >>> My procedure is... > >>> > >>> (1) Configure > >>> export CC=mpicc > >>> export FC=mpiifort > >>> export F90=$FC > >>> export MPIF90=$FC > >>> export AR="xiar" > >>> export CFLAGS="-mmic -openmp" > >>> export FFLAGS=$CFLAGS > >>> export FCFLAGS=$CFLAGS > >>> export BLAS_LIBS="-L$MKLROOT/lib/mic -lmkl_intel_lp64 -liomp5" > >>> export LAPACK_LIBS="$MKLROOT/lib/mic/libmkl_lapack95_lp64.a > -liomp5" > >>> export SCALAPACK_LIBS="-L$MKLROOT/lib/mic -lmkl_scalapack_lp64 > >> -lmkl_blacs_intelmpi_lp64 -liopm5" > >>> > >>> $ ./configure --enable-openmp --enable-parallel > >>> > >>> (2) Build > >>> $ make pw 2>&1 | tee LOG.make > >>> > >>> Best regards > >>> Kai > >>> > >>> > >>> > >>> > >>> _______________________________________________ > >>> Pw_forum mailing list > >>> [email protected] > >>> http://pwscf.org/mailman/listinfo/pw_forum > >>> > >>> -- > >>> Mr. Filippo SPIGA, M.Sc. > >>> http://filippospiga.info ~ skype: filippo.spiga > >>> > >>> «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert > >>> > >>> ***** > >>> Disclaimer: "Please note this message and any attachments are > >> CONFIDENTIAL and may be privileged or otherwise protected from > disclosure. > >> The contents are not to be disclosed to anyone other than the addressee. > >> Unauthorized recipients are requested to preserve this > >> confidentiality and to advise the sender immediately of any error in > transmission." > >>> > >>> > >>> > >>> > >>> _______________________________________________ > >>> Pw_forum mailing list > >>> [email protected] > >>> http://pwscf.org/mailman/listinfo/pw_forum > >> > >> -- > >> Mr. Filippo SPIGA, M.Sc. > >> http://filippospiga.info ~ skype: filippo.spiga > >> > >> «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert > >> > >> ***** > >> Disclaimer: "Please note this message and any attachments are > >> CONFIDENTIAL and may be privileged or otherwise protected from > disclosure. > >> The contents are not to be disclosed to anyone other than the addressee. > >> Unauthorized recipients are requested to preserve this > >> confidentiality and to advise the sender immediately of any error in > transmission." > >> > >> > >> > >> _______________________________________________ > >> Pw_forum mailing list > >> [email protected] > >> http://pwscf.org/mailman/listinfo/pw_forum > > > > _______________________________________________ > > Pw_forum mailing list > > [email protected] > > http://pwscf.org/mailman/listinfo/pw_forum > > -- > Mr. Filippo SPIGA, M.Sc. > http://filippospiga.info ~ skype: filippo.spiga > > «Nobody will drive us out of Cantor's paradise.» ~ David Hilbert > > ***** > Disclaimer: "Please note this message and any attachments are > CONFIDENTIAL and may be privileged or otherwise protected from disclosure. > The contents are not to be disclosed to anyone other than the addressee. > Unauthorized recipients are requested to preserve this confidentiality > and to advise the sender immediately of any error in transmission." > ______________________________________________________________________ Fujitsu Laboratories of Europe Limited Hayes Park Central, Hayes End Road, Hayes, Middlesex, UB4 8FE Registered No. 4153469 This e-mail and any attachments are for the sole use of addressee(s) and may contain information which is privileged and confidential. 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