Dear Mahmoud Payami,

Thank you for your answer. It helps me a lot.

So, I can use the Fixed occupation and, if the energy levels show a small bandgap, I introduce the Smearing. Is it right?


About the second question. I've read that the result of HOMO - LUMO, obtained after the SCF calculation, can give the bandgap. Can I obtain the bandgap in that way? If yes, I just have to add the nbnd function in the input file?

On 11/1/21 02:04, Mahmoud Payami Shabestari wrote:
Dear José Xavier,
Hi.
Smearing for the occupations is used when the levels near HOMO are so close (commonly in metals near Fermi level) that in consecutive iterations they may exchange positions and lead to nonconvergence. For semiconductors with 3-5 eV gap I think it won't help.
Bests
Mahmoud Payami
NSTRI, AEOI, Tehran, Iran

    From: José Xavier via users <[email protected]>
    To: "[email protected]"
    <[email protected]>
    Date: Mon, 1 Nov 2021 00:18:55 +0000 (UTC)
    Subject: [QE-users] occupation in biological molecules and band gap
    Dear all,

    I'm new in QE. The group that I'm working with usually calculates
    the properties of biologically relevant molecules, like amino
    acids, hormones, neurotransmitters, and drugs, and I would like to
    introduce the QE code to the group. Their previous papers have
    shown that the bandgap of these crystals is something between 3-5
    eV, which I understand to be in the semiconductor range.

    I've watched/read some tutorials about QE, and some of these
    showed that the occupation of semiconductors should be "smearing",
    other ones that it should be "fixed", but no one showed
    calculations with this kind of molecules. What value should I use
    for the SCF and electronic calculations of the crystals that I'm
    going to work on (amino acids, hormones, neurotransmitters, and
    drugs)?

    *Are there any differences when the molecule has a metal, like the
    Heme group?

    Besides, I would like to ask if there is a calculation that I
    could perform to obtain the bandgap of these molecules. Is it only
    possible if I create the band structure figure and calculate the
    difference between the peaks in VB and CB?

    Thank you for your help,

    Sincerely,
    José Xavier

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