On 11/01/2024 20:06, Md. Jahid Hasan Sagor wrote:
Hi Dr. Paulatto,

Thank you so much for your suggestions. I was going in the wrong direction. So if I use your recommended code (https://anharmonic.github.io/thermal2/#d3_r2qx-code), would I be able to generate the following figure for Bulk GaAs?

No. The anharmonic code is about vibrational properties.


Actually my main goal is to calculate dielectric function at different temperatures (not 0 K).

You can try to do like in the paper. Or you can try a different approach, i.e. replacing the sampling via molecular dynamics with a stochastic sampling, like the one provided by the SSCHA code http://sscha.eu/, which is also compatible with QE. Anyway, the supercell they use is tiny (8 atoms, which is just the simple-cubic form of GaAs), you should be able to use the epsilon.x code that comes with QE (check the manual in PP/Doc/man_eps.pdf). I would say, start with just epsilon as a function of the volume, test convergence and see if you can afford it,.

kind regards



Thanks
Md Jahid Hasan

On Thu, Jan 11, 2024 at 9:19 AM Lorenzo Paulatto <[email protected]> wrote:

    Hello Jahid,

    I have read the article very quickly, but I do not think they use
    the RMS to compute epsilon. All they do is compute epsilon for a
    few sample atomic potisions reached during the MD run, then they
    average it. The "Theoretical Method" section does not have any
    logic, but it is explained in the "Conclusions". The RMS seems to
    be only used to ascertain the validity of the simulation.

    hth

    On 1/11/24 04:42, Md. Jahid Hasan Sagor wrote:
    Hi Dr. Paulatto,

    Thank you so much for your comments.

    Actually, The paper (attached) extracted the temperature of each
    configuration from the mean square displacement per atom of the
    configuration (GaAs). In the harmonic approximation, they
    determined the relationship between  mean square displacement and
    temperature T from the phonon density of states of bulk GaAs
    calculated by Giannozzi et al. The equation as follows:

    image.png
    Here is the figure they generated
    image.png

    So, now If I can find out the RMS of GaAs using CPMD, I will try
    to observe the corresponding configuration of GaAs atoms.
    Finally, the atomic positions will be the input of Quantum
    Espresso pw.x etc ( I mean normally how do we calculate
    dielectric constant in QE).

    Can I use  it (
    https://anharmonic.github.io/thermal2/#d3_r2qx-code) for the same
    purpose?

    Best
    Hasan

    On Wed, Jan 10, 2024 at 3:13 PM Lorenzo Paulatto
    <[email protected]> wrote:

        I would guess that you calculate the static dielectric
        constant at the temperature-dependent volume (experimental,
        or quasi-harmonic) and you are 90% of the way there. Do you
        have a specific reason to believe that it would be
        proportional to the RMS ?

        Btw, the code d3_r2q.x included with the "anharmonic" package
        can compute the RMS from an inexpensive phonon calculation,
        maybe have a look at it before doing a large supercell MD.

        https://anharmonic.github.io/thermal2/#d3_r2qx-code

        cheers

        On 10/01/2024 19:35, Md. Jahid Hasan Sagor wrote:
        Actually, I have to calculate Dielectric constant for GaAs
        for different temperatures (not 0 k). To do that, I need to
        extract atomic positions for different RMS using CPMD. If
        anyone know someone/ or give some guidelines, it would be
        great help for me.

        Thank you.

        On Tue, Jan 9, 2024, 2:09 PM Md. Jahid Hasan Sagor
        <[email protected]> wrote:

            Dear QE community,

            I want to calculate the mean square displacement of GaAs
            using CPMD. From the mean square displacement, I want to
            extract the configuration of atoms (e.g atomic position
            of Ga and As). Could anyone please give me some
            guidelines on how I can perform it? Should I use only
            the cp.x package or by other means? Your time and
            suggestions would be a great help for me.

            Best Regards
            Md Jahid Hasan
            PhD Student, Mechanical Engineering
            University of Maine


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        _______________________________________________
        The Quantum ESPRESSO community stands by the Ukrainian
        people and expresses its concerns about the devastating
        effects that the Russian military offensive has on their
        country and on the free and peaceful scientific, cultural,
        and economic cooperation amongst peoples
        _______________________________________________
        Quantum ESPRESSO is supported by MaX (www.max-centre.eu
        <http://www.max-centre.eu>)
        users mailing list [email protected]
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-- Dr. Lorenzo Paulatto
    IdR @ IMPMC - CNRS UMR 7590 & Sorbonne Université
    phone: +33 (0)1 442 79822 / skype: paulatz
    http://www.impmc.upmc.fr/~paulatto/ - https://anharmonic.github.io/
    23-24/423 B115, 4 place Jussieu 75252 Paris CX 05

--
Dr. Lorenzo Paulatto
IdR @ IMPMC - CNRS UMR 7590 & Sorbonne Université
phone: +33 (0)1 442 79822 / skype: paulatz
http://www.impmc.upmc.fr/~paulatto/ - https://anharmonic.github.io/
23-24/423 B115, 4 place Jussieu 75252 Paris CX 05
_______________________________________________
The Quantum ESPRESSO community stands by the Ukrainian
people and expresses its concerns about the devastating
effects that the Russian military offensive has on their
country and on the free and peaceful scientific, cultural,
and economic cooperation amongst peoples
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