Hi Jerven,

Does the same error occur when the query is run against the /sparql endpoint or 
isql  ie not via the JDBC Driver ?

Also, are you able to get the  query “profile” or “sparql_to_sql_text” for the 
query as detailed at:

        
https://virtuoso.openlinksw.com/dataspace/doc/dav/wiki/Main/VirtTipsAndTricksAanalyzingSPARQLQuery
 
<https://virtuoso.openlinksw.com/dataspace/doc/dav/wiki/Main/VirtTipsAndTricksAanalyzingSPARQLQuery>

What version of Virtuoso is being used, is it a latest 07.20.3217 build ?
 
Best Regards
Hugh Williams
Professional Services
OpenLink Software, Inc.      //              http://www.openlinksw.com/
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> On 6 Feb 2017, at 16:08, Jerven Tjalling Bolleman <jerven.bolleman@sib.swiss> 
> wrote:
> 
> Dear Virtuoso users,
> 
> I am getting an new error from virtuoso, during development of a new 
> feature
> 
> 
> SPARQL execute failed:[SELECT (COUNT(?target) AS ?targets) { GRAPH 
> <http://sparql.uniprot.org/uniprot>{?subject a 
> <http://purl.uniprot.org/core/MRNA> . ?target a 
> <http://biohackathon.org/resource/faldo#ExactPosition> . ?subject 
> <http://purl.uniprot.org/core/author> ?target .}}]
> 
> Exception:virtuoso.jdbc4.VirtuosoException: SQ156: Internal Optimized 
> compiler error : sqlo table has no index in sqldf.c:3777.
> Please report the statement compiled.
> 
> 
> Regards,
> Jerven
> 
> -- 
> Jerven Tjalling Bolleman
> SIB | Swiss Institute of Bioinformatics
> CMU - 1, rue Michel Servet - 1211 Geneva 4
> t: +41 22 379 58 85 - f: +41 22 379 58 58
> Jerven.Bolleman@sib.swiss - http://www.sib.swiss
> 
> 
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