Hi Jerven, Thanks for the update, glad to hear you found the cause of the problem …
Best Regards Hugh Williams Professional Services OpenLink Software, Inc. // http://www.openlinksw.com/ Weblog -- http://www.openlinksw.com/blogs/ LinkedIn -- http://www.linkedin.com/company/openlink-software/ Twitter -- http://twitter.com/OpenLink Google+ -- http://plus.google.com/100570109519069333827/ Facebook -- http://www.facebook.com/OpenLinkSoftware Universal Data Access, Integration, and Management Technology Providers > On 9 Feb 2017, at 13:35, Jerven Tjalling Bolleman <Jerven.Bolleman@sib.swiss> > wrote: > > Hi Hugh, > > The source of the error was a truncated database file on my developer desktop > due to disk quota and a problem between my office chair and my desk ;) > > Regards, > Jerven > > On 2017-02-06 20:58, Hugh Williams wrote: >> Hi Jerven, >> Does the same error occur when the query is run against the /sparql >> endpoint or isql ie not via the JDBC Driver ? >> Also, are you able to get the query “profile” or >> “sparql_to_sql_text” for the query as detailed at: >> https://virtuoso.openlinksw.com/dataspace/doc/dav/wiki/Main/VirtTipsAndTricksAanalyzingSPARQLQuery >> What version of Virtuoso is being used, is it a latest 07.20.3217 >> build ? >> Best Regards >> Hugh Williams >> Professional Services >> OpenLink Software, Inc. // >> http://www.openlinksw.com/ >> Weblog -- http://www.openlinksw.com/blogs/ >> LinkedIn -- http://www.linkedin.com/company/openlink-software/ >> Twitter -- http://twitter.com/OpenLink >> Google+ -- MAILSCANNER HAS DETECTED DEFINITE FRAUD IN THE WEBSITE AT >> "PLUS.GOOGLE.COM <http://plus.google.com/>". DO _NOT_ TRUST THIS WEBSITE: >> http://plus.google.com/100570109519069333827/ >> <http://plus.google.com/100570109519069333827/> [2] >> Facebook -- http://www.facebook.com/OpenLinkSoftware >> <http://www.facebook.com/OpenLinkSoftware> >> Universal Data Access, Integration, and Management Technology >> Providers >>> On 6 Feb 2017, at 16:08, Jerven Tjalling Bolleman >>> <jerven.bolleman@sib.swiss <mailto:jerven.bolleman@sib.swiss>> wrote: >>> Dear Virtuoso users, >>> I am getting an new error from virtuoso, during development of a new >>> feature >>> SPARQL execute failed:[SELECT (COUNT(?target) AS ?targets) { GRAPH >>> <http://sparql.uniprot.org/uniprot >>> <http://sparql.uniprot.org/uniprot>>{?subject a >>> <http://purl.uniprot.org/core/MRNA <http://purl.uniprot.org/core/MRNA>> . >>> ?target a >>> <http://biohackathon.org/resource/faldo#ExactPosition >>> <http://biohackathon.org/resource/faldo#ExactPosition>> . ?subject >>> <http://purl.uniprot.org/core/author <http://purl.uniprot.org/core/author>> >>> ?target .}}] >>> Exception:virtuoso.jdbc4.VirtuosoException: SQ156: Internal >>> Optimized >>> compiler error : sqlo table has no index in sqldf.c:3777. >>> Please report the statement compiled. >>> Regards, >>> Jerven >>> -- >>> Jerven Tjalling Bolleman >>> SIB | Swiss Institute of Bioinformatics >>> CMU - 1, rue Michel Servet - 1211 Geneva 4 >>> t: +41 22 379 58 85 - f: +41 22 379 58 58 >>> Jerven.Bolleman@sib.swiss <mailto:Jerven.Bolleman@sib.swiss> - >>> http://www.sib.swiss <http://www.sib.swiss/> >> ------------------------------------------------------------------------------ >>> Check out the vibrant tech community on one of the world's most >>> engaging tech sites, SlashDot.org <http://slashdot.org/> [1]! >>> http://sdm.link/slashdot <http://sdm.link/slashdot> >>> _______________________________________________ >>> Virtuoso-users mailing list >>> Virtuoso-users@lists.sourceforge.net >>> <mailto:Virtuoso-users@lists.sourceforge.net> >>> https://lists.sourceforge.net/lists/listinfo/virtuoso-users >>> <https://lists.sourceforge.net/lists/listinfo/virtuoso-users> >> Links: >> ------ >> [1] http://slashdot.org <http://slashdot.org/> >> [2] http://plus.google.com/100570109519069333827/ >> <http://plus.google.com/100570109519069333827/> >> ------------------------------------------------------------------------------ >> Check out the vibrant tech community on one of the world's most >> engaging tech sites, SlashDot.org <http://slashdot.org/>! >> http://sdm.link/slashdot <http://sdm.link/slashdot> >> _______________________________________________ >> Virtuoso-users mailing list >> Virtuoso-users@lists.sourceforge.net >> <mailto:Virtuoso-users@lists.sourceforge.net> >> https://lists.sourceforge.net/lists/listinfo/virtuoso-users >> <https://lists.sourceforge.net/lists/listinfo/virtuoso-users> > > -- > Jerven Tjalling Bolleman > SIB | Swiss Institute of Bioinformatics > CMU - 1, rue Michel Servet - 1211 Geneva 4 > t: +41 22 379 58 85 - f: +41 22 379 58 58 > Jerven.Bolleman@sib.swiss <mailto:Jerven.Bolleman@sib.swiss> - > http://www.sib.swiss <http://www.sib.swiss/>
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