Hi Luca,
I forgot to tell you that I am already working with vmtk from source
code in Ubuntu 10.04. Some time ago I told you that I had some problems with
the installation , it was with cmake version and Phyton dev library.
Thank you!
Laurentiu
El 19/02/2012, a las 21:40, Luca Antiga <luca.ant...@orobix.com> escribió:
> Hi Laurentiu,
> the first thing you should do is to try to build vmtk from source. This way,
> you'll have a chance get the updated code as soon as I commit it.
> Please follow the compilation instructions on the website. After the recent
> developments, vmtk should compile without problems along with
> all its dependencies. You only need to make sure git and cmake are installed
> on your system.
> What platform are you on?
>
> Luca
>
>
> On Feb 19, 2012, at 9:09 PM, Laurentiu Lipsa wrote:
>
>>
>> Hi Luca,
>> I am using the packages, I need max diameter values to generate a
>> graph with the evolution of it. I will be thankfully if you can help me with
>> the modification of the code.
>>
>> Thank you!
>> Best regards,
>> Laurentiu
>>
>>
>> El 19/02/2012, a las 14:25, Luca Antiga <luca.ant...@orobix.com> escribió:
>>
>>> Hi Laurentiu,
>>> I just ran your code.
>>>
>>> The sections look good, as per the attached image.
>>>
>>> By the way, I suggest you to resample the centerlines prior to generating
>>> the sections, like in the following (-length 5 means: use a resampling step
>>> equal to 5 mm - you can of course change it).
>>>
>>> vmtksurfacereader -ifile christ3_ext_sm_sm.vtp --pipe vmtkcenterlines
>>> -seedselector openprofiles --pipe vmtkcenterlineresampling -length 5 --pipe
>>> vmtkcenterlinesections -branchsectionmaxsize branchmax
>>> -branchsectionminsize branchmin -ofile foo.vtp
>>>
>>> Anyway, I measured the largest section manually in paraview and I got the
>>> same numbers (56).
>>>
>>> The issue lies with the definition of maxSize (and mainly the unfortunate
>>> choice of the name): maxSize is not the maximum size of the section in any
>>> direction, but it's the maximum distance between the "center" of the
>>> section (which is really the intersection of the centerline with the
>>> section) and the boundary - that's where 40 comes out of.
>>>
>>> I confess I had to go back and look at the code, because I myself was
>>> misled and thought that max section was the maximum distance of any two
>>> points in the section.
>>>
>>> I totally agree that there should at least be an option to chose what kind
>>> of max and min distance to employ.
>>>
>>> By the way, are you using a self-built vmtk or the packages? In the former
>>> case I could update the code quite easily.
>>>
>>> Let me know, thanks for the heads up.
>>>
>>>
>>> Luca
>>>
>>> <Screen Shot 2012-02-19 at 2.05.44 PM.png>
>>>
>>>
>>>
>>> On Feb 15, 2012, at 12:40 PM, Lipsa Laurentiu Mihai wrote:
>>>
>>>> Hello,
>>>> I am trying to get the max diameter values for a abdominal aorta
>>>> aneurism ( the christ3_ext_sm_sm.vtp file) along the centerline but the
>>>> values are not good(christ3_ext_secions.dat). The diameter max value
>>>> generated by vmtk it is about 40 mm and in reality it is about 56 mm. I am
>>>> using the vmtkcenterlinesections with branchsectionmaxsize and minsize
>>>> atributes as we can see in the vmtk commands file section.txt. Also it is
>>>> generating a few strange values (close to reality) from the line 777 to
>>>> 806 (in christ3_ext_secion.dat) where the CenterlineSectionClosed atribute
>>>> value is 1(open i think).
>>>> I don´t know which can be the solution to this issue.
>>>>
>>>>
>>>> Best regards,
>>>> Laurentiu
>>>> <sections.txt><christ3_ext_secions.dat><christ3_ext_sm_sm.vtp>------------------------------------------------------------------------------
>>>> Virtualization & Cloud Management Using Capacity Planning
>>>> Cloud computing makes use of virtualization - but cloud computing
>>>> also focuses on allowing computing to be delivered as a service.
>>>> http://www.accelacomm.com/jaw/sfnl/114/51521223/_______________________________________________
>>>> vmtk-users mailing list
>>>> vmtk-users@lists.sourceforge.net
>>>> https://lists.sourceforge.net/lists/listinfo/vmtk-users
>>>
>> ------------------------------------------------------------------------------
>> Virtualization & Cloud Management Using Capacity Planning
>> Cloud computing makes use of virtualization - but cloud computing
>> also focuses on allowing computing to be delivered as a service.
>> http://www.accelacomm.com/jaw/sfnl/114/51521223/_______________________________________________
>> vmtk-users mailing list
>> vmtk-users@lists.sourceforge.net
>> https://lists.sourceforge.net/lists/listinfo/vmtk-users
>
------------------------------------------------------------------------------
Virtualization & Cloud Management Using Capacity Planning
Cloud computing makes use of virtualization - but cloud computing
also focuses on allowing computing to be delivered as a service.
http://www.accelacomm.com/jaw/sfnl/114/51521223/
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