2011/6/7 chemistry <[email protected]>: > Under "nothing happens" I meant that after execution the command > $ csg_inverse settings.xml (I'm using version 1.1.1) > I have message: "end". And I do not have any created dir (step_000) or > files (like inverse.log...). Very strange! Please run $ bash -x `which csg_inverse` settings.xml and post the output.
Cheers, Christoph > But when I'm using > > $ csg_stat --top topol.tpr --trj traj.xtc --options settings.xml --cg > propane.xml > > for computing RDF's for propane it works with the same "settings.xml" > file and I have created A-A.dist.new for A-A... > Is it possible that I have some problem with a link to the gromacs and > VOTCA cannot start iterative procedure? > > Thanks a lot in advance. > Sergio > > On Jun 6, 10:56 am, Christoph Junghans <[email protected]> wrote: >> Hi Sergio, >> >> can you be a bit more explicit, what (not) happens? >> I quickly tested the propane tutorial: >> $ pwd >> $HOME/votca/src/tutorials/propane/ibi >> $ csg_inverse --options settings.xml #for version 1.1 remove --options >> For a more verbose log see: inverse.log >> We are doing Method: ibi >> Prepare (dir step_000) >> Using initial guess from dist A-A.dist.tgt for A-A >> ... >> >> It seems to work for me. >> Which version are you using? (see csg_stat --help) >> Which command did you execute to start ibi? >> >> Cheers, >> >> Christoph >> >> 2011/6/6 chemistry <[email protected]>: >> >> >> >> > Hello all!!! >> >> > I'm just started to use votca and at the moment I'm going threw the >> > tutorial. But I've got some problem with IBI procedure. In general I >> > understood what mean every parameter in the "setting.xml" file but I >> > have a problem when I'm trying to submit the calculation: nothing >> > happened. Can anyone tell me what exactly I may have missed in the >> > standart "setting.xml" file for propane. I'll appreciate any advise, >> > thanks a lot in advance! >> >> > Sergio >> >> > -- >> > You received this message because you are subscribed to the Google Groups >> > "votca" group. >> > To post to this group, send email to [email protected]. >> > To unsubscribe from this group, send email to >> > [email protected]. >> > For more options, visit this group >> > athttp://groups.google.com/group/votca?hl=en. >> >> -- >> Dr. Christoph Junghans >> Votca Core Developer >> >> Web:http://www.votca.org > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/votca?hl=en. > > -- Dr. Christoph Junghans Votca Core Developer Web: http://www.votca.org -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/votca?hl=en.
