Hi Christoph Thank you by your answer, now it's works fine, my cmake version es 2.8.3. Regards.Marc
On Fri, Oct 21, 2011 at 9:55 AM, Christoph Junghans <[email protected]> wrote: > Hi Marc, > >>[ 5%] Built target votca-csg_manpage >>make[2]: *** No rule to make target `help2t2t', needed by >> `scripts/help2t2t'. Stop. > > I guess this is a problem with your cmake version, there was a bug in > cmake's depency solver in version 2.8.0. Just for the records, which > version of cmake do you have installed? > > You can workaround that problem by adding -DTXT2TAGS_EXECUTABLE="" to > your build.sh command. > > Cheers, > > Christoph > > > Am 21. Oktober 2011 01:55 schrieb Marc Segovia <[email protected]>: >> Dear all >> >> I follow the installation procedure recommend on webpage, with a few >> modifications on last line. >> >> prefix=/home/marc/votca >> mkdir -p ${prefix}/src >> cd ${prefix}/src >> wget http://votca.googlecode.com/hg/build.sh >> chmod +x build.sh >> sudo ./build.sh --prefix ${prefix} -DEXTERNAL_BOOST=OFF >> -DWITH_SQLITE3=OFF gromacs tools csg >> >> >> After gromacs and tools do fine , csg have problems, as below, any >> suggestion ? >> Is an linux mint on 64 bit 4core machine. >> Thanking your help >> >> Marc >> >> Working on csg >> Source dir (csg) is already there - skipping checkout >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file .hg/hgrc from untrusted user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file .hg/hgrc from untrusted user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file .hg/hgrc from untrusted user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file .hg/hgrc from untrusted user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> Not trusting file /home/marc/votca/src/csg/.hg/hgrc from untrusted >> user marc, group marc >> cmake -DCMAKE_INSTALL_PREFIX=/home/marc/votca -DEXTERNAL_BOOST=OFF >> -DWITH_SQLITE3=OFF -DCMAKE_INSTALL_RPATH_USE_LINK_PATH=ON . >> -- The C compiler identification is GNU >> -- The CXX compiler identification is GNU >> -- Check for working C compiler: /usr/bin/gcc >> -- Check for working C compiler: /usr/bin/gcc -- works >> -- Detecting C compiler ABI info >> -- Detecting C compiler ABI info - done >> -- Check for working CXX compiler: /usr/bin/c++ >> -- Check for working CXX compiler: /usr/bin/c++ -- works >> -- Detecting CXX compiler ABI info >> -- Detecting CXX compiler ABI info - done >> -- Found TXT2TAGS: /usr/bin/txt2tags >> -- checking for module 'libvotca_boost' >> -- found libvotca_boost, version >> -- Found VOTCA_BOOST: /home/marc/votca/lib64/libvotca_boost.so >> -- checking for module 'libvotca_tools' >> -- found libvotca_tools, version >> -- Found VOTCA_TOOLS: /home/marc/votca/lib64/libvotca_tools.so >> -- Looking for VotcaToolsFromC in /home/marc/votca/lib64/libvotca_tools.so; >> -- Looking for VotcaToolsFromC in >> /home/marc/votca/lib64/libvotca_tools.so; - found >> -- Looking for assert.h >> -- Looking for assert.h - found >> -- Looking for C++ include algorithm >> -- Looking for C++ include algorithm - found >> -- Looking for C++ include fstream >> -- Looking for C++ include fstream - found >> -- Looking for C++ include iomanip >> -- Looking for C++ include iomanip - found >> -- Looking for C++ include iostream >> -- Looking for C++ include iostream - found >> -- Looking for C++ include list >> -- Looking for C++ include list - found >> -- Looking for C++ include map >> -- Looking for C++ include map - found >> -- Looking for C++ include numeric >> -- Looking for C++ include numeric - found >> -- Looking for C++ include sstream >> -- Looking for C++ include sstream - found >> -- Looking for C++ include stdexcept >> -- Looking for C++ include stdexcept - found >> -- Looking for C++ include string >> -- Looking for C++ include string - found >> -- Looking for C++ include vector >> -- Looking for C++ include vector - found >> -- Looking for C++ include cstdlib >> -- Looking for C++ include cstdlib - found >> -- Looking for sqrt in m >> -- Looking for sqrt in m - found >> -- checking for module 'libgmx' >> -- found libgmx, version 4.5.3 >> -- Looking for GromacsVersion in /usr/lib/libgmx.so; >> -- Looking for GromacsVersion in /usr/lib/libgmx.so; - found >> -- Looking for init_mtop in /usr/lib/libgmx.so; >> -- Looking for init_mtop in /usr/lib/libgmx.so; - found >> -- Looking for output_env_init in /usr/lib/libgmx.so; >> -- Looking for output_env_init in /usr/lib/libgmx.so; - found >> -- Looking for init_domdec_vsites in /usr/lib/libgmx.so; >> -- Looking for init_domdec_vsites in /usr/lib/libgmx.so; - not found >> -- Found GROMACS: /usr/lib/libgmx.so >> -- Found Doxygen: /usr/bin/doxygen >> -- Configuring done >> -- Generating done >> -- Build files have been written to: /home/marc/votca/src/csg >> cleaning csg >> buidling csg >> Scanning dependencies of target changelog >> [ 1%] [ 1%] Building CXX object >> src/libcsg/CMakeFiles/gmx_print_version.dir/modules/io/gmx_print_version.cc.o >> Building CHANGELOG using txt2tags >> [ 2%] Built target changelog >> Current revision is 75b296de50f4 >> [ 2%] Built target help2t2t >> Current revision is 75b296de50f4 >> Current revision is 75b296de50f4 >> Linking CXX executable gmx_print_version >> [ 2%] Built target hgversion >> [ 2%] Built target csg_call >> [ 2%] Building votca-csg manpage >> Current revision is 75b296de50f4 >> [ 2%] Built target gmx_print_version >> [ 3%] [ 3%] Built target csg_include_links >> Built target csg_inverse >> make[2]: *** No rule to make target `help2t2t', needed by >> `scripts/help2t2t'. Stop. >> make[1]: *** [scripts/CMakeFiles/csg_call_manpage.dir/all] Error 2 >> make[1]: *** Waiting for unfinished jobs.... >> [ 5%] Built target votca-csg_manpage >> make[2]: *** No rule to make target `help2t2t', needed by >> `scripts/help2t2t'. Stop. >> make[1]: *** [scripts/CMakeFiles/csg_inverse_manpage.dir/all] Error 2 >> [ 6%] Generating gmx_libs_version.h >> Current revision is 75b296de50f4 >> [ 6%] Built target multi_g_rdf >> [ 9%] [ 10%] [ 9%] [ 11%] [ 12%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/trajectorywriter.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblistgrid.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/triclinicbox.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/exclusionlist.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/openbox.cc.o >> [ 14%] [ 15%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/topologyreader.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/trajectoryreader.cc.o >> [ 16%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/boundarycondition.cc.o >> [ 18%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/map.cc.o >> [ 19%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/molecule.cc.o >> [ 20%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/topology.cc.o >> [ 22%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/cgengine.cc.o >> [ 23%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/nblist.cc.o >> [ 24%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/cgmoleculedef.cc.o >> [ 25%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/topologymap.cc.o >> [ 27%] [ 28%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/beadlist.cc.o >> Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/version.cc.o >> [ 29%] Building CXX object src/libcsg/CMakeFiles/votca_csg.dir/imcio.cc.o >> [ 31%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/nematicorder.cc.o >> [ 32%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/orthorhombicbox.cc.o >> [ 33%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/csgapplication.cc.o >> [ 35%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmx_version_check.cc.o >> [ 36%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectorywriter.cc.o >> [ 37%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtrajectoryreader.cc.o >> [ 38%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmx_version.cc.o >> [ 40%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/gmxtopologyreader.cc.o >> [ 41%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/growriter.cc.o >> [ 42%] [ 44%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbtopologyreader.cc.o >> Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/grotopologyreader.cc.o >> [ 45%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xmltopologyreader.cc.o >> [ 46%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/xyzwriter.cc.o >> [ 48%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/lammpsreader.cc.o >> [ 49%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/esptopologyreader.cc.o >> /home/marc/votca/src/csg/src/libcsg/modules/io/xyzwriter.cc: In member >> function ‘virtual void >> votca::csg::XYZWriter::Write(votca::csg::Topology*)’: >> /home/marc/votca/src/csg/src/libcsg/modules/io/xyzwriter.cc:40:46: >> warning: format ‘%d’ expects type ‘int’, but argument 3 has type >> ‘std::vector<votca::csg::Bead*, std::allocator<votca::csg::Bead*> >>>::size_type’ >> [ 50%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/esptrajectoryreader.cc.o >> [ 51%] Building CXX object >> src/libcsg/CMakeFiles/votca_csg.dir/modules/io/pdbwriter.cc.o >> Linking CXX shared library libvotca_csg.so >> [ 51%] Built target votca_csg >> make: *** [all] Error 2 >> >> -- >> You received this message because you are subscribed to the Google Groups >> "votca" group. >> To post to this group, send email to [email protected]. >> To unsubscribe from this group, send email to >> [email protected]. >> For more options, visit this group at >> http://groups.google.com/group/votca?hl=en. >> >> > > > > -- > Christoph Junghans > Votca Core Developer > > Web: http://www.votca.org > > -- > You received this message because you are subscribed to the Google Groups > "votca" group. > To post to this group, send email to [email protected]. > To unsubscribe from this group, send email to > [email protected]. > For more options, visit this group at > http://groups.google.com/group/votca?hl=en. > > -- You received this message because you are subscribed to the Google Groups "votca" group. To post to this group, send email to [email protected]. To unsubscribe from this group, send email to [email protected]. For more options, visit this group at http://groups.google.com/group/votca?hl=en.
