Addshore added a comment.

So you can have a look at the log for everything (checkout the docker-compose logs command), a paste of those would help pin down what happened.
Although if you have already run 'down' then the containers have been removed and the logs won't exist any more.

When I then tried to run some SPARQL queries in the WDQS the WDQS gave a nginx error

What error exactly? Again you can see what was happening in cases like this by looking at the logs of the containers.

I waited an evening for the wdqs to pick up. Unfortunatly still not updates

It looks like you are running into the exact issue that T182394 was filed for (though that is a guess without seeing the logs).
Per T182394#3938346 the fix we need will be in 0.3.0 of the query service which is currently blocked on T178712



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