All you will have to put in the articles is {{GNF_proteinBox}}. Then when it
renders the page first it will write out the template. Then any
{{#property:...}} calls that are inserted will be replaced with the data from
Wikidata. You never have to specify the Wikidata ID manually. The #property
finds the ID automatically based on the title of the article that transcludes
the template.
Date: Wed, 17 Apr 2013 12:58:03 +0530
From: [email protected]
To: [email protected]
Subject: Re: [Wikidata-l] Regarding wikidata inclusion syntax
Thanks michael. Its clear to me now. I had one more issue. We still have to use
property syntax in main wiki article. consider the following ex:
1) {{GNF_proteinBox|id=q1111}} (include in article ie link to item q111- gene
wikidata item)
In the main template structure we introduce parser functions{{#property: of
wikidata item....}}
2) {{GNF_proteinBox| specify property syntax here}}
case 2 is supported. what about case 1??
On Wed, Apr 17, 2013 at 11:57 AM, Michael Hale <[email protected]> wrote:
Yes, it seems to be working. I did a preview of deleting the flag parameter on
the Italian article for Turin and it still showed up. The template uses an
{{#if:...}} like this:
{{#if:{{Wikidata|P41|{{{Bandiera|}}}}}|[[File:{{Wikidata|P41|{{{Bandiera|}}}}}|125x125px|border|{{#if:{{{Nome|}}}|{{{Nome}}}|{{PAGENAME}}
}} – Bandiera]]}}
From: [email protected]
To: [email protected]
Date: Wed, 17 Apr 2013 02:02:24 -0400
Subject: Re: [Wikidata-l] Regarding wikidata inclusion syntax
My understanding is that scenario will definitely be supported. I have no idea
if it is already or if the parser functions only currently work in articles.
Date: Wed, 17 Apr 2013 11:17:43 +0530
From: [email protected]
To: [email protected]
Subject: Re: [Wikidata-l] Regarding wikidata inclusion syntax
Hi ,
Thanks Michael for the info. Yes, the properties in the templates have to be
yet created.
http://www.wikidata.org/wiki/Wikidata:Molecular_Biology_task_force/Properties.
We already have a bot in python to query wikipedia.
I wanted to know whether the parser functions{{property:...}} are being
evaluated after a template is transcluded.
Hope to see that this feature would be implemented soon.
Ideally, we just want {{GNF_proteinBox}} at the beginning of the wiki article.
If the parser functions would not be supported, then what would be the best
approach? Other than passing arguments to {{GNF_ProteinBox}} in the wiki gene
article. This would increase the length of each wiki gene article.
Thanks in advance,
Chinmay
On Wed, Apr 17, 2013 at 12:48 AM, Michael Hale <[email protected]> wrote:
If you are saying that the parser functions ({{#property:...}}) aren't being
evaluated after the template is transcluded then I guess the feature isn't
fully implemented yet.
From: [email protected]
To: [email protected]
Date: Tue, 16 Apr 2013 15:11:35 -0400
Subject: Re: [Wikidata-l] Regarding wikidata inclusion syntax
Hey, that's a great project. The current situation with ProteinBoxBot is not
ideal. We don't want to create a separate template for every protein. I suppose
they do that now to make the articles slightly shorter, but Wikidata will allow
us to accomplish the same thing without the confusing extra templates and
ultimately to synchronize the infobox data across different language
Wikipedias. With Wikidata the idea is that you will eventually just be able to
write {{GNF Protein box}} at the top of the protein article and you will get
what you want. If you look at our current list of biology properties though,
there are still some that need to be added to fully support protein box.
http://www.wikidata.org/wiki/Wikidata:List_of_properties#Biology_.2F_Biologie_.2F_Biologie_.2F_.D0.91.D0.B8.D0.BE.D0.BB.D0.BE.D0.B3.D0.B8.D1.8F
You can start adding data for the current properties already though. I just
added the Entrez ID to adenosine deaminase. http://www.wikidata.org/wiki/Q356093
A list of human proteins on Wikipedia is here.
http://en.wikipedia.org/wiki/Category:Human_proteins You can access the list
through code by using a MediaWiki API request like this:
http://en.wikipedia.org/w/api.php?action=query&list=categorymembers&cmtitle=Category:Human_proteins&format=json&cmlimit=500
The use cmcontinue to get them in pages of 500 at a time until you have all
10000.
To go from article title to Wikidata item use something like
this:http://wikidata.org/w/api.php?action=wbgetentities&sites=enwiki&titles=Adenosine%20deaminase&languages=en&format=json
Then you'll want to propose a bot to automatically add properties.
http://www.wikidata.org/wiki/Wikidata:Requests_for_permissions/Bot
The property inclusion syntax refers to the item on the article that
transcludes the template. So all of the extra templates that ProteinBoxBot is
currently making would all have identical wiki markup if it was fully using
Wikidata.
Date: Tue, 16 Apr 2013 19:46:25 +0530
From: [email protected]
To: [email protected]
Subject: [Wikidata-l] Regarding wikidata inclusion syntax
Hi,
I am Chinmay Naik, an undergrad in CS at Bangalore,India. I hope to contribute
to CrowsourcingBiology through GSOC 2013. The project i am interested is
"convert bot to write to wikidata". Currently the bot does this database
---> wikipedia. The proposal is this database ----> wikidata ----->
wikipedia.
I have the basic idea of how to capture gene info onto wikidata. I was
wondering about the inclusion syntax of wikidata. I had a look at the current
inclusion of wikidata v0.3 meta. Some things are unclear to me. How best it is
to map wikidata items on to wiki articles.??
Currently, the bot uses templates. The template structure is
http://en.wikipedia.org/wiki/Template:GNF_Protein_box. The bot fills a various
gene templates http://en.wikipedia.org/wiki/Template:PBB/100. These gene
templates are included on gene wikipedia articles.
I tried to work out on the italian wikipedia. When i try to include a
template(mapped to wikidata item) onto an wiki article, the wikidata properties
were not displayed.
So is it not possible to include wikidata items in template namespace??
So transclusion where data is retreived from wikidata item not supported??
Kindly pardon me if this is not the right mailing list to post to about this.
Thanks in advance,
Chinmay
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