Hi again,
I found why! once set the new cutoff I need to run "noe calc" and then
it works. Is it right? But where is set the cutoff to 0.1 0.5?
andrea
andrea spitaleri wrote:
> Hi there,
> I am having a weird behaviour from noe command. This is what I do in
> tkconsole (and in a script):
> mol load pdb file.pdb
> noe load 0 0 ambig.tbl
> noe cutoff #gives { 0.1 0.5 }
> then I change the cutoff values to 0.5 0.5 doing
> noe cutoff 0.5 0.5 # and
> noe cutoff # gives { 0.5 0.5 }
> I run again "noe load 0 0 ambig.tbl" and I get the same result as
> before and if I do noe cutoff I get { 0.1 0.5 } again!
> Then, starting from scratch and opening the same files, If I use the
> "NOE window" using cutoff 0.5 I get a different result and infact if
> I do noe cutoff in tkconsole I get {0.5 0.5}.
> what am I doing wrong? I want in my script set the cutoff to 0.5 0.5.
> Thanks in advance
>
> andrea
>
--
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Andrea Spitaleri
Dulbecco Telethon Institute
c/o DIBIT Scientific Institute
Biomolecular NMR, 1B4
Via Olgettina 58
20132 Milano (Italy)
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