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Hello Gary-- > > IO speed could be the problem here as we do have known IO speed > problems its just that i wasn't aware that they were that bad, I will > have to investigate further > For reading the files in the loop: use pdbTool, not the helpers in protocol, as the former has less overhead. You also might try eginput/gb1_rdc/aveStruct.py, as that fits structures as a side-effect. beest regards-- Charles -----BEGIN PGP SIGNATURE----- Version: GnuPG v1.4.6 (GNU/Linux) Comment: Processed by Mailcrypt 3.5.8+ <http://mailcrypt.sourceforge.net/> iD8DBQFG/T0bPK2zrJwS/lYRAtVBAJ9IPd9qoq6uIIqrkq70HXBriYAaiwCghreH 9E/JCo8SgiOHJZaqUT5zBB0= =eNiP -----END PGP SIGNATURE-----
