It's a known bug (due to a single newline added by mistake) in aroma.affymetrix 2.13.0. Fixed in 2.13.1. Update by:
source('http://callr.org/install#aroma.affymetrix') and you should be ready to go. /Henrik On Fri, Mar 13, 2015 at 11:35 AM, Georg <wzz150...@gmail.com> wrote: > Hi There, > > I am trying to use doCRMAv2 to smooth data. The command I used is like this: > > ces <- doCRMAv2(celFile, cdf=cdf, combineAlleles=FALSE, verbose=verbose) > > The command ran a while, the I got the message as this: > > > Error in (...) : 3 arguments passed to '(' which requires 1 > Calls: doCRMAv2 ... createMonocellCdf.AffymetrixCdfFile -> .writeCdfUnits > Execution halted > > I am using R 3.1.3. Any idea what I did wrong? Thanks. > > George > > -- > -- > When reporting problems on aroma.affymetrix, make sure 1) to run the latest > version of the package, 2) to report the output of sessionInfo() and > traceback(), and 3) to post a complete code example. > > > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group with website http://www.aroma-project.org/. > To post to this group, send email to aroma-affymetrix@googlegroups.com > To unsubscribe and other options, go to http://www.aroma-project.org/forum/ > > --- > You received this message because you are subscribed to the Google Groups > "aroma.affymetrix" group. > To unsubscribe from this group and stop receiving emails from it, send an > email to aroma-affymetrix+unsubscr...@googlegroups.com. > For more options, visit https://groups.google.com/d/optout. -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.