Hi everyone, if you check the image at:
https://dl.dropboxusercontent.com/u/83643/Screen%20Shot%202015-05-20%20at%201.50.50%20AM.png you'll see segmentation results for a few human samples across multiple chromosomes. This was achieved via CBS (under the aroma framework, therefore CbsModel). A few samples show constant gain/loss levels across several chrs and that's quite unlikely, suggesting the possibility of an issue with the sample-specific intensity levels. My question: is there a simple solution under the aroma framework to adjust for that? thanks, b -- -- When reporting problems on aroma.affymetrix, make sure 1) to run the latest version of the package, 2) to report the output of sessionInfo() and traceback(), and 3) to post a complete code example. You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group with website http://www.aroma-project.org/. To post to this group, send email to aroma-affymetrix@googlegroups.com To unsubscribe and other options, go to http://www.aroma-project.org/forum/ --- You received this message because you are subscribed to the Google Groups "aroma.affymetrix" group. To unsubscribe from this group and stop receiving emails from it, send an email to aroma-affymetrix+unsubscr...@googlegroups.com. For more options, visit https://groups.google.com/d/optout.
