I have also had this kind of problems once in a while. When restarting base
did not help, I did some manual sql in the Job table in mysql. I suspect my
hang situation comes from a lot of zombie jobs taking up what seems to be a
limited number of slots in a job-queue. I inspect the Job table and delete
never finishing jobs. I looked at curStatus and queuePosition. But be
careful if you start changing the database yourself like this. Back up the
relevant tables first.


Vegard Nygaard
Software Engineer
Department of Tumor Biology (Montebello)
Rikshospitalet-Radiumhospitalet Medical Center 0310 Oslo
Bioinformatics user support (NMC)
Phone 0047 22935590

> Axel wrote
> Hi Anthony,
> 
> I had two main problems with plugins:
> 
> 1)
> If a job hangs it is possible to start BASE without the jobManager:
> startBase.php -m
> after that one can start the jobManager with the option -R:
> /usr/Databases/testbase/bin/jobManager.php -R
> 
> 2)
> the php-scripts in BASE are run under a linux shell. In my case some
> scripts had windows-linebreaks and therefore did not run. (Ad that time
> I developped some things on Windows...)
> 
> Axel
> 
> 
> Bob MacCallum wrote:
> > Hi Anthony
> >
> > You need to make sure jobManager.php is running on your system.
> >
> > Sometimes this dies on ours.
> >
> > Not sure which user it should run as, but on ours it's running as
> > base's unix user (the one apache runs as).
> >
> > cheers,
> > Bob.
> >
> >
> > Anthony Pemberton writes:
> >  > Dear Base users,
> >  >
> >  > I am using Base 1.2.15. One of my users is trying to run plugins
> through
> >  > the
> >  > Analyze data menu. Every time she tries to execute the job it just
> >  > stalls with the Status "Enqueued". I have a feeling that as the
> admin, I
> >  > need to do something else to get these jobs to run. Would someone
> tell
> >  > me what I need top do to get the jobs moving?
> >  >
> >  > Regards,
> >  >
> >  > Tony P.
> >  >
> >  > **************************************************************
> >  > Mr. A. Pemberton                 Tel:+44 121 414 3388
> >  > School of Biosciences,                   Fax:+44 121 414 5925
> >  > The University of Birmingham   Email:[EMAIL PROTECTED]
> >  > Birmingham B15 2TT U.K.
> >  > **************************************************************
> >  >
> >  >
> >  >
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