I just finally managed to replicate the problem.
If I start a bash shell without sourcing /sw/bin/init.sh to set up the
fink environment, I get this problem too.
So first issue
source /sw/bin/init.sh
then
coot
(or if you use tcsh, issue "source /sw/bin/init.csh ).
This not only sets up the $PATH, but ensures the rest of the
environment is set up correctly by sourcing the various files in the
directory /sw/etc/profile.d
On Nov 18, 2008, at 12:10 PM, Enrico Malito wrote:
Dear Dr. Scott,
thanks for your messages.
I've tried both your suggestions, but they did not help.
I do have:
% dpkg -S svg_loader.so
librsvg2-gtk: /sw/lib/gtk-2.0/2.10.0/loaders/svg_loader.so
tried to fink reinstall librsvg2-gtk, here what I get:
Information about 7428 packages read in 6 seconds.
The following package will be reinstalled:
librsvg2-gtk
Reading buildlock packages...
/sw/bin/dpkg-lockwait -i /sw/var/cache/apt/archives/librsvg2-
gtk_2.22.3-1_darwin-i386.deb
(Reading database ... 36662 files and directories currently
installed.)
Preparing to replace librsvg2-gtk 2.22.3-1 (using .../librsvg2-
gtk_2.22.3-1_darwin-i386.deb) ...
Unpacking replacement librsvg2-gtk ...
Setting up librsvg2-gtk (2.22.3-1) ...
and also tried DYLD_LIBRARY_PATH="" ; coot
Unfortunately I am still having the same problem.
E.
On Nov 17, 2008, at 5:52 PM, William G. Scott wrote:
Hi Enrico:
I have this:
% dpkg -S svg_loader.so
librsvg2-gtk: /sw/lib/gtk-2.0/2.10.0/loaders/svg_loader.so
The package that provides this is librsvg2-gtk, which should be a
coot dependency.
Could you please check, and maybe try reinstalling it, ie.
fink reinstall librsvg2-gtk
and let me know what happens?
Many thanks in advance, and also many thanks to Charles Ballard for
pointing this out.
Bill
On Nov 17, 2008, at 12:49 PM, Ballard, CC (Charles) wrote:
Hi Enrico
For some reason the pixbuf.loaders file does not contain the
information
about the svg_loader. This is normally achieved by running
gdk-pixbuf-query-loaders and piping the output to the pixbuf.loaders
file (use find to locate it). To confirm that you have the svg
library
setup in gdk in the first place try and locate the svg_loader.la
file
(in my case - none fink - it is in lib/gtk-2.0/2.10.0/loaders ).
gdk-pixbuf-query-loaders will have a manual page if more info is
required.
If all else fails, there is a bundle of coot 0.5 at
http://www.ccp4.ac.uk/download/downloadman.php
Charles
-----Original Message-----
From: Mailing list for users of COOT Crystallographic Software
[mailto:[EMAIL PROTECTED] On Behalf Of Enrico Malito
Sent: 17 November 2008 16:09
To: COOT@JISCMAIL.AC.UK
Subject: [COOT] problem in loading icons
Hello,
I was wondering if anybody observed this before. When I start coot
I get
this messages (a long list of errors for the whole content of the
folder
/sw/share/coot/pixmaps/):
Error loading icon: Couldn't recognize the image file format for
file
'/sw/share/coot/pixmaps/add-alt-conf.svg'
Error loading icon: Couldn't recognize the image file format for
file
'/sw/share/coot/pixmaps/add-peptide-1.svg'
...
...
Error loading icon: Couldn't recognize the image file format for
file
'/sw/share/coot/pixmaps/undo-1.png'
Error loading icon: Couldn't recognize the image file format for
file
'/sw/share/coot/pixmaps/unknown-blob.png'
initalize graphics molecules...done.
and no icons are loaded in the right bar of coot, only grey boxes
(see
attach).
This is 0.5.1-pre-1 installed through fink on OSX 10.5.5, and those
icons files are actually there (in /sw/share/coot/pixmaps/) and
seem oK.
Thanks much in advance for any hints.
EM
