X-Debbugs-Cc: Gert Wollny <gw.foss...@gmail.com>
Thank you Mattia for this report. I rebuild locally and got the same two tests failing. After a first investigation, I think Gert is probably right about this "-ffloat-store" or at least about floating point precision. For instance, for test #46, which complains about a difference between expected output and actual output: diff .../camitk-build/Testing/Temporary/action-reconstruction-integration-test/output-1.vtk ... /camitk-build/Testing/Temporary/action-reconstruction-integration-test/2018-11-29T16-54-57/output-1.vtk gives 3626c3626 < 0.804485 -0.417868 -0.422127 0.224294 -0.343943 -0.911809 -0.567178 -0.335857 -0.752004 ---
0.804485 -0.417868 -0.422127 0.224294 -0.343943 -0.911809 -0.567178 -0.335857 -0.752003
3632c3632 < -0.346881 0 -0.937909 -0.150485 -0.0767808 -0.985626 -0.458605 -0.843355 -0.280059 ---
-0.346881 0 -0.937909 -0.150485 -0.0767809 -0.985626 -0.458605 -0.843355 -0.280059
3635c3635 < 0.13497 -0.236088 -0.962313 -0.487965 -0.150704 -0.859755 -0.484595 -0.281462 -0.828219 ---
0.13497 -0.236088 -0.962313 -0.487964 -0.150704 -0.859755 -0.484595 -0.281462 -0.828219
Note the floating point precision difference. In both cases the vtk class that is used is the marching cube reconstruction algorithm. May be the "-ffloat-store" cxx flag is not added in VTK (or more specically is just erased somewhere just for the marching cube reconstruction algorithm, as other filters seem to not have this problem? I will check a little bit further to see if the problem is in camitk or vtk7 Best regards, Emmanuel On 27/11/2018 17:48, Mattia Rizzolo wrote:
Source: camitk Version: 4.1.2-1 Severity: serious X-Debbugs-Cc: Gert Wollny <gw.foss...@gmail.com> Hi, so camitk FTBFS on i386; I don't know why it sometimes suceeds on the buildds, but for example on the r-b infra it always failed recently. In particular, it fails two tests: 47: Test command: /usr/bin/cmake "-DCAMITK_TEST_COMMAND=/build/camitk-4.1.2/camitk-build/bin/camitk-actionstatemachine" "-DCAMITK_TEST_COMMAND_ARG=-f /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/asm-input.scxml -o /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test -a" "-DCAMITK_TEST_EXPECTED_FILES=output-1.vtk" "-DCAMITK_TEST_OUTPUT_DIR=/build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test" "-DCAMITK_TEST_NAME=action-reconstruction-integration-test" "-P" "/build/camitk-4.1.2/sdk/cmake/modules/macros/camitk/test/CamiTKTestActionStateMachine.cmake" 47: Test timeout computed to be: 1800 47: QStandardPaths: XDG_RUNTIME_DIR points to non-existing path '/run/user/1000', please create it with 0700 permissions. 47: [FAIL] 47: CMake Error at /build/camitk-4.1.2/sdk/cmake/modules/macros/camitk/test/CamiTKTestActionStateMachine.cmake:115 (message): 47: action-reconstruction-integration-test: (one or more) output file do(es) 47: not match the corresponding expected file. 47: 47: Action state machine regression test called with: 47: 47: - CAMITK_TEST_NAME=action-reconstruction-integration-test 47: - CAMITK_TEST_COMMAND=/build/camitk-4.1.2/camitk-build/bin/camitk-actionstatemachine 47: - CAMITK_TEST_COMMAND_ARG=-f /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/asm-input.scxml -o /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test -a 47: - CAMITK_TEST_EXPECTED_FILES=output-1.vtk 47: - CAMITK_TEST_OUTPUT_DIR=/build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test 47: 47: ================================================= 47: 47: Comparing 47: /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/2018-11-27T16-12-36/output-1.vtk 47: with 47: /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/output-1.vtk 47: 47: 47: Output: 47: 47: 47: 47: Result: 47: 47: action-reconstruction-integration-test: comparing output-1.vtk failed: 47: 47: Output file 47: /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/output-1.vtk 47: is not the same as 47: /build/camitk-4.1.2/camitk-build/Testing/Temporary/action-reconstruction-integration-test/2018-11-27T16-12-36/output-1.vtk 47: 47: 47: 47: 47: 47: 47/550 Test #47: action-reconstruction-integration-test ......................***Failed 3.00 sec and similarly for test 341. I've tried the proposed change by Gert, i.e. passing -ffloat-store, but it didn't help. _______________________________________________ Debian-med-packaging mailing list debian-med-packag...@alioth-lists.debian.net https://alioth-lists.debian.net/cgi-bin/mailman/listinfo/debian-med-packaging
-- Emmanuel Promayon Professeur Univ. Grenoble Alpes / Polytech Grenoble Laboratoire TIMC-IMAG / équipe GMCAO Responsable du département Technologies de l'Information pour la Santé
