On Fri, Nov 1, 2013 at 4:04 AM, Xu Dong Huang <xudonghm...@gmail.com> wrote:
> Dear all, > > I would like to assess the probability distribution of particle bond > distance/length over the entire run, specifically I want to collect > possibly a histogram representation or even a regular plot. Would using > g_bond be the correct way to obtain the probability distribution? g_bond -h and/or manual chapter 8 are the best places to start. > Or is there another function that gets probability distribution > specifically. Also, if using g_bond, it will give me an average (I > suppose), so how can I get a histogram/data series representation? (I do > not want to visualize this result using xmgrace) > g_analyze, or your favourite maths/stats software package. P.S I believe someone earlier suggested a link to the data collection > reporting procedure, I tried it and changed the .xvg to a .csv, but the > data reported in excel format all belongs to 1 single column, which won’t > let me make a plot. > A plot of two columns, no, but it should let you plot a histogram! Mark -- gmx-users mailing list gmx-users@gromacs.org http://lists.gromacs.org/mailman/listinfo/gmx-users * Please search the archive at http://www.gromacs.org/Support/Mailing_Lists/Search before posting! * Please don't post (un)subscribe requests to the list. Use the www interface or send it to gmx-users-requ...@gromacs.org. * Can't post? Read http://www.gromacs.org/Support/Mailing_Lists
