Dear Experts,
I am trying to acquire the averaged volume time series for subcortical structures in text file form. >From this post >http://www.mail-archive.com/hcp-users@humanconnectome.org/msg01184.html , I >assume that doing these commands : wb_command -cifti-separate tfMRI_EMOTION_LR_Atlas.dtseries.nii COLUMN -volume AMYGDALA_LEFT output_left_amygdala.nii.gz -roi roi_left_amygdala.nii.gz -crop gives me a nifti file with *all* the voxels from the left amygdala (output_left_amygdala.nii.gz). Is there a way to get the *averaged* time series for all left amygdala voxels into a nifti file using the -cifti-separate command? If so, I suppose that I could then use the -nifti-information command to extract the time series from that averaged nifti file into a text file. Or, is there another way that I should do this? Thanks in advance! Jason _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
