Yes thank you! On Dec 6, 2016 8:13 AM, "Dierker, Donna" <do...@wustl.edu> wrote:
> TimH - you mean this one? > > On Jul 7, 2016, at 10:26 AM, Dierker, Donna <do...@wustl.edu> wrote: > > You need to adjust your overlay settings; see attached capture. Make sure > Threshold Type is set to On. > > > > > On Dec 5, 2016, at 11:16 AM, Timothy Hendrickson <hendr...@umn.edu> wrote: > > Hi Donna, > > Could you please re-attach the screen capture that you took for Vasudev? I > cannot find it... > I also am looking into how to observe significance levels with a threshold > of p<0.05. > > Respectfully, > > -Tim > > You need to adjust your overlay settings; see attached capture. Make sure > Threshold Type is set to On. > > ________________________________ > From: > hcp-users-boun...@humanconnectome.org > > < > hcp-users-boun...@humanconnectome.org > > on behalf of Dev vasu > < > vasudevamurthy.devulapa...@gmail.com > > > Sent: Thursday, July 7, 2016 10:03:28 AM > To: Dierker, Donna > Cc: < > hcp-users@humanconnectome.org > > > Subject: Re: [HCP-Users] thresholding the data to p-value > > Dear madam, > > I don't want to write to an ROI volume, i just want to observe activation > levels with a threshold of p<0.05. > > > Thanks > Vasudev > > On 7 July 2016 at 16:31, Dierker, Donna > < > do...@wustl.edu<mailto:do...@wustl.edu > >> wrote: > > Hi Vasudev, > > > I'm pretty sure wb_view can display voxels within a range of values > (inside > upper and lower limit), but I think you mean threshold and write a ROI > volume. > For that, try: > > > wb_command -metric-math "(x<${Pthresh})" ${PthreshFile} -var x > ${PstatFile} > > > Donna > > ________________________________ > From: > > hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@ > humanconnectome.org > > > > < > hcp-users-boun...@humanconnectome.org<mailto:hcp-users-boun...@ > humanconnectome.org > >> > on behalf of Dev vasu > < > vasudevamurthy.devulapa...@gmail.com<mailto:vasudevamurth > y.devulapa...@gmail.com > >> > Sent: Wednesday, July 6, 2016 12:04:50 PM > To: Harms, Michael; > < > hcp-users@humanconnectome.org<mailto:hcp-users@humanconnectome.org > >> > Subject: [HCP-Users] thresholding the data to p-value > > > > Dear sir, > > I would like to threshold my results to a p-value of p<0.05 and i couldn't > do > it from workbench GUI, I can only threshold the data to percentage changes. > > Please kindly let me know how i can possibly threshold the results to real > p-stats. > > > > Thanks > Vasudev > > > > > Timothy Hendrickson > Department of Psychiatry > University of Minnesota > Office: 612-624-6441 > Mobile: 507-259-3434 (texts okay) > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > > > > ------------------------------ > > The materials in this message are private and may contain Protected > Healthcare Information or other information of a sensitive nature. If you > are not the intended recipient, be advised that any unauthorized use, > disclosure, copying or the taking of any action in reliance on the contents > of this information is strictly prohibited. If you have received this email > in error, please immediately notify the sender via telephone or return mail. > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
