The HCP-MMP1.0 does not contain subcortical parcellations. This would be future work. Others may be able to point you to some cerebellum/subcortical parcellations from other works.
As for "borders": subcortical areas, which are represented as volume-based structures, cannot have their boundaries represented as border files, because border files are only for surface-based structures (currently, just cerebral cortex). The most similar concept to borders for volume structures (as opposed to the sheetlike cortex) would be surfaces (the boundary of a 3D object is a 2D surface). This makes sense, as the cortical surfaces we use are derived from segmenting the cortex out of the volume. Tim On Mon, May 15, 2017 at 11:48 AM, Guy Hwang <ghwa...@wisc.edu> wrote: > Hello, > > > I have been using wb_command -cifti-parcellate to extract time > series using > Q1-Q6_RelatedParcellation210.L.CorticalAreas_dil_Colors.32k_fs_LR.dlabel.nii > (and R) > > > For subcortical areas, I see the border files, but not the dlabel.nii > files on https://balsa.wustl.edu/study/show/RVVG. Can you help me find > these? Or is there a way to extract timeseries from subcortical areas using > other commands? > > > Thank you, > > > Guy > <https://balsa.wustl.edu/study/show/RVVG> > A Multi-modal Parcellation of Human Cerebral Cortex > <https://balsa.wustl.edu/study/show/RVVG> > balsa.wustl.edu > SPECIES: Human DESCRIPTION: Understanding the amazingly complex human > cerebral cortex requires a map (or parcellation) of its major subdivisions, > known as cortical areas. > > > > _______________________________________________ > HCP-Users mailing list > HCP-Users@humanconnectome.org > http://lists.humanconnectome.org/mailman/listinfo/hcp-users > _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
