Hi Tim,
Thanks for the clarification! As of now my atlas is a nifti file. How can I create gifti label files from a nifti file? Sorry if this has been posted in the past... Sincerely, Zach ________________________________ From: Timothy Coalson <tsc...@mst.edu> Sent: Friday, May 19, 2017 5:02 PM To: Zachary Monge Cc: hcp-users@humanconnectome.org Subject: Re: [HCP-Users] Overlaying atlas in Connectome Workbench You can create borders from gifti label files by using wb_command -label-to-border. For doing analysis within parcels, take a look at wb_command -cifti-parcellate. For just showing the boundaries on top of other data, you can load the data into wb_view, set it up as a layer, click the wrench icon in the layer, go to the "Labels" tab, and change "drawing type" to "outline color" or "outline label color". Tim On Fri, May 19, 2017 at 1:29 PM, Zachary Monge <zachary.mo...@duke.edu<mailto:zachary.mo...@duke.edu>> wrote: Hi, I have a custom atlas (471 ROIs) that I would like to overlay on a surface and create borders for each ROI. Is there a way I can do this in the Connectome Workbench? I eventually would like to use this overlay to display results (t-values) of analyses ran for each of the ROIs. I would greatly appreciate any help! Sincerely, Zach Monge _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org<mailto:HCP-Users@humanconnectome.org> http://lists.humanconnectome.org/mailman/listinfo/hcp-users<https://urldefense.proofpoint.com/v2/url?u=http-3A__lists.humanconnectome.org_mailman_listinfo_hcp-2Dusers&d=DwMFaQ&c=imBPVzF25OnBgGmVOlcsiEgHoG1i6YHLR0Sj_gZ4adc&r=cvID6XRu2i1l-ChMoLqPKhiz6tFfA9cN1tEyCsXyolA&m=s6eiLuQLU7hyscVtYtvsSQFSC33pUjM1_ekGqkfll8I&s=51MLssL1MQCkEa5Cf8_6Z7zLBV7NtAToAtVuI5a4_2k&e=> _______________________________________________ HCP-Users mailing list HCP-Users@humanconnectome.org http://lists.humanconnectome.org/mailman/listinfo/hcp-users
