You're right, Rolf. Thanks for reminding that article.
The process they use in that paper is:
pdb -> [PyMOL] -> vrml -> [Adobe Acrobat 3D toolkit] -> u3d -> [Adobe
Acrobat 3D] -> TIFF screenshots -> [Adobe Photoshop] -> edited
screenshots -> [Adobe Illustrator] -> jpeg
Then,
u3d + jpeg -> [Adobe Acrobat 3D] -> pdf
Smooth and intuitive, is it? ;-)
And I just found this:
"MeshLab is the first open source tool to provide direct conversion
of 3D meshes into the U3D format. Now you can create pdf with 3D
objects with just MeshLab and LaTeX."
http://meshlab.sourceforge.net/
(GPL)
Maybe that could be integrated or connected with Jmol in order to
have direct export to U3D?
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