Right, thanks for the file.  Here's the patch.

--- omap2plus-cpufreq.c~        2011-06-24 15:50:32.000000000 +0100
+++ omap2plus-cpufreq.c 2011-06-24 16:00:08.000000000 +0100
@@ -44,6 +44,16 @@
 static char *mpu_clk_name;
 static struct device *mpu_dev;
 
+#ifdef CONFIG_SMP
+struct lpj_info {
+       unsigned long   ref;
+       unsigned int    freq;
+};
+
+static DEFINE_PER_CPU(struct lpj_info, lpj_ref);
+static struct lpj_info global_lpj_ref;
+#endif
+
 static int omap_verify_speed(struct cpufreq_policy *policy)
 {
        if (!freq_table)
@@ -109,14 +119,25 @@
        freqs.new = omap_getspeed(policy->cpu);
 
 #ifdef CONFIG_SMP
-       /* Adjust jiffies before transition */
+       /* Adjust per-cpu loops_per_jiffy before transition */
        for_each_cpu(i, policy->cpus) {
-               unsigned long lpj = per_cpu(cpu_data, i).loops_per_jiffy;
-
-               per_cpu(cpu_data, i).loops_per_jiffy = cpufreq_scale(lpj,
-                                                       freqs.old,
-                                                       freqs.new);
+               struct lpj_info *lpj = &per_cpu(lpj_ref, i);
+               if (!lpj->freq) {
+                       lpj->ref = per_cpu(cpu_data, i).loops_per_jiffy;
+                       lpj->freq = freqs.old;
+               }
+
+               per_cpu(cpu_data, i).loops_per_jiffy =
+                       cpufreq_scale(lpj->ref, lpj->freq, freqs.new);
+       }
+
+       /* And don't forget to adjust the global one */
+       if (!global_lpj_ref.freq) {
+               global_lpj_ref.ref = loops_per_jiffy;
+               global_lpj_ref.freq = freqs.old;
        }
+       loops_per_jiffy = cpufreq_scale(global_lpj_ref.ref, global_lpj_ref.freq,
+                                       freqs.new);
 #endif
 
        /* Notify transitions */


Notice how we adjust _both_ the per-cpu loops_per_jiffy, and that we
adjust them with reference to the initial values.

If you adjust lpj with reference to the last, then you _will_ build up
a progressively bigger and bigger error in the value over time.
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