Hi Ralf, Thanks for the response. I tried reinstalling Xcode 4.2.1 and the GCC/Fortran installer from http://r.research.att.com/tools/ (gcc-42-5666.3-darwin11.pkg) before installing the distribute package that you suggested.
I then reran the numpy installer being sure to enter the three export lines as suggested on the numpy installation guide for Lion. Still no success. I guess I'll just have to wait for more official support for my configuration. I have included the output from terminal just in case it is useful as there were a few lines in red that suggest something isn't quite right with something. I have placed ** before the lines that appear in red. I appreciate the suggestions, Thanks again, Adam. running build running config_cc unifing config_cc, config, build_clib, build_ext, build commands --compiler options running config_fc unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options running build_src build_src building py_modules sources creating build creating build/src.macosx-10.6-intel-3.2 creating build/src.macosx-10.6-intel-3.2/numpy creating build/src.macosx-10.6-intel-3.2/numpy/distutils building library "npymath" sources customize NAGFCompiler **Could not locate executable f95 customize AbsoftFCompiler **Could not locate executable f90 **Could not locate executable f77 customize IBMFCompiler **Could not locate executable xlf90 **Could not locate executable xlf customize IntelFCompiler **Could not locate executable fort **Could not locate executable ifc customize GnuFCompiler **Could not locate executable g77 customize Gnu95FCompiler **Could not locate executable gfortran customize G95FCompiler **Could not locate executable g95 customize PGroupFCompiler **Could not locate executable pgf90 **Could not locate executable pgf77 **don't know how to compile Fortran code on platform 'posix' C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' gcc-4.2: _configtest.c gcc-4.2 _configtest.o -o _configtest success! removing: _configtest.c _configtest.o _configtest customize NAGFCompiler customize AbsoftFCompiler customize IBMFCompiler customize IntelFCompiler customize GnuFCompiler customize Gnu95FCompiler customize G95FCompiler customize PGroupFCompiler **don't know how to compile Fortran code on platform 'posix' customize NAGFCompiler customize AbsoftFCompiler customize IBMFCompiler customize IntelFCompiler customize GnuFCompiler customize Gnu95FCompiler customize G95FCompiler customize PGroupFCompiler **don't know how to compile Fortran code on platform 'posix' C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' gcc-4.2: _configtest.c _configtest.c:1: warning: conflicting types for built-in function exp _configtest.c:1: warning: conflicting types for built-in function exp gcc-4.2 _configtest.o -o _configtest success! removing: _configtest.c _configtest.o _configtest creating build/src.macosx-10.6-intel-3.2/numpy/core creating build/src.macosx-10.6-intel-3.2/numpy/core/src creating build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath conv_template:> build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/npy_math.c conv_template:> build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/ieee754.c conv_template:> build/src.macosx-10.6-intel-3.2/numpy/core/src/npymath/npy_math_complex.c building extension "numpy.core._sort" sources Generating build/src.macosx-10.6-intel-3.2/numpy/core/include/numpy/config.h customize NAGFCompiler customize AbsoftFCompiler customize IBMFCompiler customize IntelFCompiler customize GnuFCompiler customize Gnu95FCompiler customize G95FCompiler customize PGroupFCompiler **don't know how to compile Fortran code on platform 'posix' customize NAGFCompiler customize AbsoftFCompiler customize IBMFCompiler customize IntelFCompiler customize GnuFCompiler customize Gnu95FCompiler customize G95FCompiler customize PGroupFCompiler **don't know how to compile Fortran code on platform 'posix' C compiler: gcc-4.2 -fno-strict-aliasing -fno-common -dynamic -DNDEBUG -g -O3 -isysroot /Developer/SDKs/MacOSX10.6.sdk -arch i386 -arch x86_64 -isysroot /Developer/SDKs/MacOSX10.6.sdk compile options: '-Inumpy/core/src/private -Inumpy/core/src -Inumpy/core -Inumpy/core/src/npymath -Inumpy/core/src/multiarray -Inumpy/core/src/umath -Inumpy/core/include -I/Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m -c' gcc-4.2: _configtest.c In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, from _configtest.c:1: /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, from _configtest.c:1: /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory lipo: can't figure out the architecture type of: /var/folders/_c/z033hf1s1cgfcxtxfnpg0lsm0000gn/T//ccKv548x.out In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, from _configtest.c:1: /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory In file included from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/bytearrayobject.h:9, from /Library/Frameworks/Python.framework/Versions/3.2/include/python3.2m/Python.h:73, from _configtest.c:1: /Developer/SDKs/MacOSX10.6.sdk/usr/include/stdarg.h:4:25: error: stdarg.h: No such file or directory lipo: can't figure out the architecture type of: /var/folders/_c/z033hf1s1cgfcxtxfnpg0lsm0000gn/T//ccKv548x.out failure. removing: _configtest.c _configtest.o Running from numpy source directory.Traceback (most recent call last): File "setup.py", line 196, in <module> setup_package() File "setup.py", line 189, in setup_package configuration=configuration ) File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/core.py", line 186, in setup return old_setup(**new_attr) File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/core.py", line 148, in setup dist.run_commands() File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", line 917, in run_commands self.run_command(cmd) File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", line 936, in run_command cmd_obj.run() File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build.py", line 37, in run old_build.run(self) File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/command/build.py", line 126, in run self.run_command(cmd_name) File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/cmd.py", line 313, in run_command self.distribution.run_command(command) File "/Library/Frameworks/Python.framework/Versions/3.2/lib/python3.2/distutils/dist.py", line 936, in run_command cmd_obj.run() File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", line 152, in run self.build_sources() File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", line 169, in build_sources self.build_extension_sources(ext) File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", line 328, in build_extension_sources sources = self.generate_sources(sources, ext) File "/Users/adammcnicol/Desktop/numpy-1.6.1/build/py3k/numpy/distutils/command/build_src.py", line 385, in generate_sources source = func(extension, build_dir) File "numpy/core/setup.py", line 410, in generate_config_h moredefs, ignored = cocache.check_types(config_cmd, ext, build_dir) File "numpy/core/setup.py", line 41, in check_types out = check_types(*a, **kw) File "numpy/core/setup.py", line 271, in check_types "Cannot compile 'Python.h'. Perhaps you need to "\ SystemError: Cannot compile 'Python.h'. Perhaps you need to install python-dev|python-devel. Message: 3 Date: Sun, 18 Dec 2011 09:49:00 +0100 From: Ralf Gommers <ralf.gomm...@googlemail.com> Subject: Re: [Numpy-discussion] Problem installing NumPy with Python 3.2.2/MacOS X 10.7.2 To: Discussion of Numerical Python <numpy-discussion@scipy.org> Message-ID: <cabl7cqh-+t+6p5z_s_jvycrcb-fwk0q3wiawjazgmdp8ajk...@mail.gmail.com> Content-Type: text/plain; charset="iso-8859-1" On Sat, Dec 17, 2011 at 12:59 PM, McNicol, Adam <amcni...@longroad.ac.uk>wrote: > ** > > Hi There, > > Thanks for the responses. > > At this point I would settle from just being able to install matplotlib. > Even if some of the functionality isn't present currently that is fine. > > I'm afraid my knowledge of Python falls down about here as well. I > installed Python 3.2.2 via the installer from Python.org so I have no idea > whether Python.h is present or where indeed I would find it or how I would > add it to the search path. > > Do I have to install from source or something like that? > No, your Python install should be fine if you just got the dmg installer from python.org. I recommend you install the OS X SDKs and distribute ( http://pypi.python.org/pypi/distribute), as I said before, and try again to compile numpy. Unfortunately you have chosen a difficult combination of OS and Python version, so we don't have binary installers you can use (yet). Ralf > Thanks again, > > > Adam. > > > -----Original Message----- > From: McNicol, Adam > Sent: Fri 12/16/2011 11:07 PM > To: numpy-discussion@scipy.org > Subject: Problem installing NumPy with Python 3.2.2/MacOS X 10.7.2 > > Hi There, > > I am very new to numpy and have really only started investigating it as > one of my students needs some functionality from matplotlib. I have managed > to install everything under Windows for work in class but I use a Mac at > home and have been struggling all night to get it to build and install. > > I should mention that I am using Python 3.2.2 both in school and at home > and it isn't an option to use Python 2.7 as all of the rest of my class is > taught in Python 3. I also have the most recent version of Xcode installed. > > I have installed the correct build of gcc-4.2 with Fortran (gcc-4.2 (Apple > build 5666.3) with GNU Fortran 4.2.4 for Mac OS X 10.7 (Lion)) from > http://r.research.att.com/tools/ > > I then followed the install instructions but the build fails with the > following message: > > File "numpy/core/setup.py", line 271, in check_types > "Cannot compile 'Python.h'. Perhaps you need to "\ > SystemError: Cannot compile 'Python.h'. Perhaps you need to install > python-dev|python-devel. > > I have got no idea what to do with this error message. Any help would be > much appreciated. > > Kind Regards, > > > Adam. > > > _______________________________________________ > NumPy-Discussion mailing list > NumPy-Discussion@scipy.org > http://mail.scipy.org/mailman/listinfo/numpy-discussion > > -------------- next part -------------- An HTML attachment was scrubbed... URL: http://mail.scipy.org/pipermail/numpy-discussion/attachments/20111218/0747fb12/attachment-0001.html ------------------------------ _______________________________________________ NumPy-Discussion mailing list NumPy-Discussion@scipy.org http://mail.scipy.org/mailman/listinfo/numpy-discussion End of NumPy-Discussion Digest, Vol 63, Issue 54 ************************************************
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