To follow up on install failure detailed below, went ahead and removed python-setuptools while installing distribute-0.6.4. The ongoing unresolved issue is that to re-install numpy, scipy, rpy prior to PyCuda requires the setuptools dependency which messes up the install as previously mentioned. Would appreciate any further insights, V.
---------- Forwarded message ---------- From: Vince Fulco <vful...@gmail.com> Date: Wed, Aug 18, 2010 at 6:30 PM Subject: Fwd: [PyCUDA] installing/upgrading issue with siteconf.py, setup.py and 0.94rc To: pycuda@tiker.net Following up on install issues of two weeks ago. Sorry for the delay as on the road. I can send the make install output next if necessary. It would appear make & make install completes without error except for the same 'dist.py' warning (found below) and the make tests raise a multitude of errors. I think I may have the setup tools vs. distribute problem mentioned previously although only running python 2.6.2 and python-setuptools 0.6c9 on FC12. However, if I attempt a 'yum remove python-setuptools', it will remove numpy and rpy I use elsewhere. Will I need to re-install separately? Would prefer to hear others experiences before removing working packages. Best, V. ## 'rm -Rf build' (done) make output: [r...@skynet-linux1 pycuda]# make ctags -R src || true /usr/bin/python setup.py build Scanning installed packages Setuptools installation detected at /home/vfulco/Downloads/pycuda Non-egg installation Removing elements out of the way... Already patched. /home/vfulco/Downloads/pycuda/setuptools-0.6c9-py2.6.egg-info already patched. Extracting in /tmp/tmpL4muIo Now working in /tmp/tmpL4muIo/distribute-0.6.4 Building a Distribute egg in /home/vfulco/Downloads/pycuda /home/vfulco/Downloads/pycuda/setuptools-0.6c9-py2.6.egg-info already exists /usr/include/ /boost/ python .hpp /usr/lib64 / lib boost_python-mt .so /usr/lib64 / lib boost_thread-mt .so /usr/local/cuda/ /bin/ nvcc /usr/local/cuda/include / cuda .h /usr/lib64 / lib cuda .so /usr/lib64/python2.6/distutils/dist.py:266: UserWarning: Unknown distribution option: 'install_requires' warnings.warn(msg) running build running build_py creating build creating build/lib.linux-x86_64-2.6 creating build/lib.linux-x86_64-2.6/pycuda copying pycuda/autoinit.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/curandom.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/tools.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/cumath.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/gpuarray.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/reduction.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/driver.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/compiler.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/__init__.py -> build/lib.linux-x86_64-2.6/pycuda copying pycuda/elementwise.py -> build/lib.linux-x86_64-2.6/pycuda creating build/lib.linux-x86_64-2.6/pycuda/gl copying pycuda/gl/autoinit.py -> build/lib.linux-x86_64-2.6/pycuda/gl copying pycuda/gl/__init__.py -> build/lib.linux-x86_64-2.6/pycuda/gl running build_ext building '_driver' extension creating build/temp.linux-x86_64-2.6 creating build/temp.linux-x86_64-2.6/src creating build/temp.linux-x86_64-2.6/src/cpp creating build/temp.linux-x86_64-2.6/src/wrapper gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/usr/include/ -I/usr/local/cuda/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/cpp/cuda.cpp -o build/temp.linux-x86_64-2.6/src/cpp/cuda.o gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/usr/include/ -I/usr/local/cuda/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/cpp/bitlog.cpp -o build/temp.linux-x86_64-2.6/src/cpp/bitlog.o gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/usr/include/ -I/usr/local/cuda/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/wrapper/wrap_cudadrv.cpp -o build/temp.linux-x86_64-2.6/src/wrapper/wrap_cudadrv.o src/wrapper/wrap_cudadrv.cpp: In function ‘void init_module__driver()’: src/wrapper/wrap_cudadrv.cpp:443: warning: deprecated conversion from string constant to ‘char*’ src/wrapper/wrap_cudadrv.cpp:447: warning: deprecated conversion from string constant to ‘char*’ src/wrapper/wrap_cudadrv.cpp:448: warning: deprecated conversion from string constant to ‘char*’ src/wrapper/wrap_cudadrv.cpp:449: warning: deprecated conversion from string constant to ‘char*’ src/wrapper/wrap_cudadrv.cpp:450: warning: deprecated conversion from string constant to ‘char*’ gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/usr/include/ -I/usr/local/cuda/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/wrapper/mempool.cpp -o build/temp.linux-x86_64-2.6/src/wrapper/mempool.o gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -DHAVE_GL=1 -Isrc/cpp -I/usr/include/ -I/usr/local/cuda/include -I/usr/lib64/python2.6/site-packages/numpy/core/include -I/usr/include/python2.6 -c src/wrapper/wrap_cudagl.cpp -o build/temp.linux-x86_64-2.6/src/wrapper/wrap_cudagl.o g++ -pthread -shared build/temp.linux-x86_64-2.6/src/cpp/cuda.o build/temp.linux-x86_64-2.6/src/cpp/bitlog.o build/temp.linux-x86_64-2.6/src/wrapper/wrap_cudadrv.o build/temp.linux-x86_64-2.6/src/wrapper/mempool.o build/temp.linux-x86_64-2.6/src/wrapper/wrap_cudagl.o -L/usr/lib64 -L/usr/lib64 -L/usr/lib64 -lboost_python-mt -lboost_thread-mt -lcuda -lpython2.6 -o build/lib.linux-x86_64-2.6/pycuda/_driver.so building '_pvt_struct' extension gcc -pthread -fno-strict-aliasing -pipe -Wall -Wp,-D_FORTIFY_SOURCE=2 -fexceptions -fstack-protector --param=ssp-buffer-size=4 -m64 -mtune=generic -D_GNU_SOURCE -fPIC -fwrapv -O3 -DNDEBUG -fPIC -I/usr/include/python2.6 -c src/wrapper/_pycuda_struct.c -o build/temp.linux-x86_64-2.6/src/wrapper/_pycuda_struct.o src/wrapper/_pycuda_struct.c:240: warning: ‘unpack_float’ defined but not used src/wrapper/_pycuda_struct.c:252: warning: ‘unpack_double’ defined but not used gcc -pthread -shared build/temp.linux-x86_64-2.6/src/wrapper/_pycuda_struct.o -L/usr/lib64 -lpython2.6 -o build/lib.linux-x86_64-2.6/pycuda/_pvt_struct.so [r...@skynet-linux1 pycuda]# -- Vince Fulco, CFA, CAIA 612.424.5477 (universal) vful...@gmail.com A posse ad esse non valet consequentia “the possibility does not necessarily lead to materialization”
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