Dear All, My latest structure has several 3-10 helices present, however, a few of them in cartoon form shows the starting residue of the helix to be distorted/twisted.
The structure is 2.2Ang and I can clearly see the position of the amide bond and the direction of carbonyl, but I cannot stop the twisting of the cartoon. I have tried altering that residue ss to a loop which “works” (as in the problem goes away) but I really wish to show the full helix. I have also run DSSPtoPDB and force it not to recognize the 3-10 helices as helices but in cartoon form you can see they are helices. Do anyone have suggestions or a way to force it to be a helix? [A close up of a toy Description automatically generated with low confidence] Thanks, Daniel [Text Frederick National Laboratory on a teal background] [LinkedIn icon]<https://www.linkedin.com/company/frederick-national-laboratory-for-cancer-research/> [Twitter icon] <https://twitter.com/FredNatLab> [Facebook icon] <https://www.facebook.com/FredNatLab> [Instagram icon] <https://www.instagram.com/frednatlab/> Daniel A Bonsor PhD | Scientist I RAS Structural Biology [Phone icon] office: 301-846-5134 / cell: 443-983-2930 [Email icon] daniel.bon...@nih.gov<mailto:daniel.bon...@nih.gov> [Contractor] [Location icon] Post Office Box B, Frederick, MD 21702 [Link icon] frederick.cancer.gov<https://frederick.cancer.gov/> The Frederick National Laboratory for Cancer Research is operated by Leidos Biomedical Research, Inc. for the National Cancer Institute. --
_______________________________________________ PyMOL-users mailing list Archives: http://www.mail-archive.com/pymol-users@lists.sourceforge.net Unsubscribe: https://sourceforge.net/projects/pymol/lists/pymol-users/unsubscribe