Dear Deepak, You'll need to clarify what EXACTLY is happening? If empty plots are created then try to wrap the plot() in print() statements. print(plot(...)).
Furthermore I would recommend to avoid attach. HTH, Thierry ------------------------------------------------------------------------ ---- ir. Thierry Onkelinx Instituut voor natuur- en bosonderzoek / Research Institute for Nature and Forest Cel biometrie, methodologie en kwaliteitszorg / Section biometrics, methodology and quality assurance Gaverstraat 4 9500 Geraardsbergen Belgium tel. + 32 54/436 185 thierry.onkel...@inbo.be www.inbo.be To call in the statistician after the experiment is done may be no more than asking him to perform a post-mortem examination: he may be able to say what the experiment died of. ~ Sir Ronald Aylmer Fisher The plural of anecdote is not data. ~ Roger Brinner The combination of some data and an aching desire for an answer does not ensure that a reasonable answer can be extracted from a given body of data. ~ John Tukey -----Oorspronkelijk bericht----- Van: r-help-boun...@r-project.org [mailto:r-help-boun...@r-project.org] Namens deepak m r Verzonden: dinsdag 14 juli 2009 13:17 Aan: r-help@r-project.org Onderwerp: [R] hi friends, is there any wait function in R hi, is there any wait function in R. I am running one R script to plot many graphs it is in the for loop. its showing no error but its not plotting well I think i can solve this problem with a wait function. Please help me in this regards. If u need any clarification about programme. u can find the script below. best regards, Deepak.M.R Biocomputing Group University of Bologana. #!/usr/bin/R s<-c("GG","GA","GV","GL","GI","GM","GF","GW","GP","GS","GT","GC","GY","G N","GQ","GD","GE","GK","GR","GH","AA","AV","AL","AI","AM","AF","AW","AP" ,"AS","AT","AC","AY","AN","AQ","AD","AE","AK","AR","AH","VV","VL","VI"," VM","VF","VW","VP","VS","VT","VC","VY","VN","VQ","VD","VE","VK","VR","VH ","LL","LI","LM","LF","LW","LP","LS","LT","LC","LY","LN","LQ","LD","LE", "LK","LR","LH","II","IM","IF","IW","IP","IS","IT","IC","IY","IN","IQ","I D","IE","IK","IR","IH","MM","MF","MW","MP","MS","MT","MC","MY","MN","MQ" ,"MD","ME","MK","MR","MH","FF","FW","FP","FS","FT","FC","FY","FN","FQ"," FD","FE","FK","FR","FH","WW","WP","WS","WT","WC","WY","WN","WQ","WD","WE ","WK","WR","WH","PP","PS","PT","PC","PY","PN","PQ","PD","PE","PK","PR", "PH","SS","ST","SC","SY","SN","SQ","SD","SE","SK","SR","SH","TT","TC","T Y","TN","TQ","TD","TE","TK","TR","TH","CC","CY","CN","CQ","CD","CE","CK" ,"CR","CH","YY","YN","YQ","YD","YE","YK","YR","YH","NN","NQ","ND","NE"," NK","NR","NH","QQ","QD","QE","QK","QR","QH","DD","DE"! ,"DK","DR","DH","EE","EK","ER","EH","KK","KR","KH","RR","RH","HH") for(t in 1:length(s)) { a<-read.table(paste("../All_alpha_proteins/alp",s[t],"mean.sat",sep=""), header=T) attach (a) names(a) al<-1:length(paste("alp",s[t],"_mean",sep="")) b<-read.table(paste("../All_beta_proteins/bet",s[t],"mean.sat",sep=""),h eader=T) attach(b) names(b) bl<-1:length(paste("bet",s[t],"_mean",sep="")) p<-read.table(paste("../Alpha_and_beta_proteins_a+b/apb",s[t],"mean.sat" ,sep=""),header=T) attach(p) names(p) pl<-1:length(paste("apb",s[t],"_mean",sep="")) o<-read.table(paste("../Alpha_and_beta_proteins_aorb/aob",s[t],"mean.sat ",sep=""),header=T) attach(o) names(o) ol<-1:length(paste("aob",s[t],"_mean",sep="")) postscript(file=paste("Mean_",s[t],"_Plot.ps",sep="")) plot(0,xlim=c(0,160),ylim=c(0,70),main=paste("Mean Distance Plot for ",s[t]," Rsidue pair",sep=""),ylab="Mean Distance in Angstrom",xlab="Residue Seperation Number") lines(al,paste("alp",s[t],"_mean",sep=""),col="blue",lty = 2) lines(bl,paste("bet",s[t],"_mean",sep=""),col="yellow",lty = 2) lines(pl,paste("apb",s[t],"_mean",sep=""),col="red",lty = 2) lines(ol,paste("aob",s[t],"_mean",sep=""),col="green",lty = 2) legend("topleft",c("Alpha Proteins","Beta Proteins","Alpha + Beta","Alpha or Beta"),lty = c(2,2,2,2),col=c("blue","yellow","red","green")) dev.off() } ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. Dit bericht en eventuele bijlagen geven enkel de visie van de schrijver weer en binden het INBO onder geen enkel beding, zolang dit bericht niet bevestigd is door een geldig ondertekend document. The views expressed in this message and any annex are purely those of the writer and may not be regarded as stating an official position of INBO, as long as the message is not confirmed by a duly signed document. ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.