Hi, Empty plot is getting i dont know why. can u please clarify how can i use Print function instead of plot function. best regards deepak
On Tue, Jul 14, 2009 at 7:48 AM, Petr PIKAL<petr.pi...@precheza.cz> wrote: > Hi > > For this type of problems I do multipage pdf. > > pdf("file", ....) > for (i in ...) { > do all stuff including plot > } > dev.off() > > and then check the plots afterwards. Recently there was some post about > how to wait but you do not want only wait you want also to interactively > change plotting parameters, won't you. > > cat("\n","Enter x","\n") # prompt > x=scan(n=1) # read 1 line from console > > this construction print something on console and reads one line from > console. There are also some packages which leave you choose from several > options. I think in car and randomForest are such routines so you could > check how it is done. > > Regards > Petr > > r-help-boun...@r-project.org napsal dne 14.07.2009 13:17:01: > >> hi, >> is there any wait function in R. I am running one R script to plot >> many graphs it is in the for loop. its showing no error but its not >> plotting well I think i can solve this problem with a wait function. >> Please help me in this regards. If u need any clarification about >> programme. u can find the script below. >> >> best regards, >> Deepak.M.R >> Biocomputing Group >> University of Bologana. >> >> >> #!/usr/bin/R >> s<-c >> > ("GG","GA","GV","GL","GI","GM","GF","GW","GP","GS","GT","GC","GY","GN","GQ","GD","GE","GK","GR","GH","AA","AV","AL","AI","AM","AF","AW","AP","AS","AT","AC","AY","AN","AQ","AD","AE","AK","AR","AH","VV","VL","VI","VM","VF","VW","VP","VS","VT","VC","VY","VN","VQ","VD","VE","VK","VR","VH","LL","LI","LM","LF","LW","LP","LS","LT","LC","LY","LN","LQ","LD","LE","LK","LR","LH","II","IM","IF","IW","IP","IS","IT","IC","IY","IN","IQ","ID","IE","IK","IR","IH","MM","MF","MW","MP","MS","MT","MC","MY","MN","MQ","MD","ME","MK","MR","MH","FF","FW","FP","FS","FT","FC","FY","FN","FQ","FD","FE","FK","FR","FH","WW","WP","WS","WT","WC","WY","WN","WQ","WD","WE","WK","WR","WH","PP","PS","PT","PC","PY","PN","PQ","PD","PE","PK","PR","PH","SS","ST","SC","SY","SN","SQ","SD","SE","SK","SR","SH","TT","TC","TY","TN","TQ","TD","TE","TK","TR","TH","CC","CY","CN","CQ","CD","CE","CK","CR","CH","YY","YN","YQ","YD","YE","YK","YR","YH","NN","NQ","ND","NE","NK","NR","NH","QQ","QD","QE","QK","QR","QH","DD","DE"! >> ,"DK","DR","DH","EE","EK","ER","EH","KK","KR","KH","RR","RH","HH") >> for(t in 1:length(s)) >> { >> > a<-read.table(paste("../All_alpha_proteins/alp",s[t],"mean.sat",sep=""),header=T) >> attach (a) >> names(a) >> al<-1:length(paste("alp",s[t],"_mean",sep="")) >> > b<-read.table(paste("../All_beta_proteins/bet",s[t],"mean.sat",sep=""),header=T) >> attach(b) >> names(b) >> bl<-1:length(paste("bet",s[t],"_mean",sep="")) >> p<-read.table(paste("../Alpha_and_beta_proteins_a+b/apb",s >> [t],"mean.sat",sep=""),header=T) >> attach(p) >> names(p) >> pl<-1:length(paste("apb",s[t],"_mean",sep="")) >> o<-read.table(paste("../Alpha_and_beta_proteins_aorb/aob",s >> [t],"mean.sat",sep=""),header=T) >> attach(o) >> names(o) >> ol<-1:length(paste("aob",s[t],"_mean",sep="")) >> postscript(file=paste("Mean_",s[t],"_Plot.ps",sep="")) >> plot(0,xlim=c(0,160),ylim=c(0,70),main=paste("Mean Distance Plot for >> ",s[t]," Rsidue pair",sep=""),ylab="Mean Distance in >> Angstrom",xlab="Residue Seperation Number") >> lines(al,paste("alp",s[t],"_mean",sep=""),col="blue",lty = 2) >> lines(bl,paste("bet",s[t],"_mean",sep=""),col="yellow",lty = 2) >> lines(pl,paste("apb",s[t],"_mean",sep=""),col="red",lty = 2) >> lines(ol,paste("aob",s[t],"_mean",sep=""),col="green",lty = 2) >> legend("topleft",c("Alpha Proteins","Beta Proteins","Alpha + >> Beta","Alpha or Beta"),lty = >> c(2,2,2,2),col=c("blue","yellow","red","green")) >> dev.off() >> } >> >> ______________________________________________ >> R-help@r-project.org mailing list >> https://stat.ethz.ch/mailman/listinfo/r-help >> PLEASE do read the posting guide > http://www.R-project.org/posting-guide.html >> and provide commented, minimal, self-contained, reproducible code. > > ______________________________________________ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.