On Dec 9, 2009, at 21:51 , David Winsemius wrote:
On Dec 7, 2009, at 10:04 AM, Simon Urbanek wrote:
On Dec 6, 2009, at 14:45 , David Winsemius wrote:
On Dec 6, 2009, at 2:32 PM, Alexy Khrabrov wrote:
I used to have the following in my .Rprofile:
if (length(.libPaths())==1)
.libPaths(paste(Sys.getenv("HOME"),"/Library/R/",paste(R.version
$major,as.integer(R.version$minor),sep='.'),"/library",sep=''))
-- and it added my user-defined library directory. Then I
installed
packages there, so during an upgrade, I'd know exactly which
packages
I installed and auto-upgrade with a script.
However, in R 2.10's Mac OSX GUI, .libPaths(new) does nothing...
Did
its behavior change?
What is "new"?
.libPaths() would need a character argument. Are you referring to
this Grab picture of a checkbox in the Startup GUI preferences:
<pastedGraphic.tiff>
(probably not passed through the r-help-list-server)
I actually have the inverse problem. It has been created and I
would like to remove it.
Well, then do so :).
I did so and restarted. I checked my ~/.Rprofile setting and that is
not the source of the persistent non-R.Framework libpath. I reviewed
the Macs section of the Installation Manual and it tells me that
it's basically a Unix device and that I should review the general R
instructions.
Reading the Installation and Administration Guide in section 6 I see
several areas about which I am uninformed:
> R.home(component="home")
[1] "/Library/Frameworks/R.framework/Resources"
I don't have an R_HOME/etc/Rprofile.site
I think I have found my problem because:
Sys.getenv("R_LIBS_USER")
R_LIBS_USER
"~/Library/R/2.10/library"
So I tried Sys.setenv(R_LIB_USER = "")
I thought from the help page that this would report a logical value
for success or failure, but got neither. Wish me luck.
Uh - all that has nothing to do with what I was saying - remove the ~/
Library/R/2.10/library directory, that's all you need to do ...
Cheers,
Simon
--
David
Cheers,
Simon
Changing the mailing list to r-sig-mac to which Alexy should have
sent this.
--
David Winsemius, MD
Heritage Laboratories
West Hartford, CT
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