For a exercises in a class I teach, I previously posted source (with NAMESPACE file), Windows & Mac OS binaries here: http://www.phytools.org/phybase. Maybe this will help.

All the best, Liam

Liam J. Revell, Assistant Professor of Biology
University of Massachusetts Boston
web: http://faculty.umb.edu/liam.revell/
email: liam.rev...@umb.edu
blog: http://blog.phytools.org

On 11/5/2014 12:49 PM, Daniel Fulop wrote:
Hi,

Just a quick suggestion. You could install the archived version of
phybase in order to look at the R code for your function(s) of interest
and then reuse that code directly in your own R scripts (or put them in
separate scripts and "source" them). You can also then further taylor
those functions to suit your needs. This gets around the issue of using
an old package version, but the minor "downside" that maintaining the
functions' code is then up to you.

HTH,
Dan.

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