On 14 Dec 2016, at 15:33, Joseph W. Brown <josep...@umich.edu> wrote:
> I wonder if reading in a Nexus file with a translation table bypasses this > problem? Cheers, If I try read.nexus with a TAXLABELS entry, it still (oddly) results in a multiPhylo structure of the same size as before running .compressTipLabel. However, when I then do .compressTipLabel() it only takes a moment. My guess is this is something to do with skipping the renumbering process. It would be nice to have the option in both read.nexus and read.tree, so that I don’t have to allocate memory (many GB in my case) for the intermediate step. Thanks Yan _______________________________________________ R-sig-phylo mailing list - R-sig-phylo@r-project.org https://stat.ethz.ch/mailman/listinfo/r-sig-phylo Searchable archive at http://www.mail-archive.com/r-sig-phylo@r-project.org/
