On 19 July 2012 14:56, Paul Emsley <paul.ems...@bioch.ox.ac.uk> wrote:
> On 19/07/12 13:28, Fabian Dey wrote:
> >
> > I am having difficulties installing RDKIT on a Centos 5.6 (with python
> > bindings).
>
Who hasn't? I have installed RDKit on centos 5.0 and 5.1 and it wasn't a
pleasure filled experience mostly due to the "outdated" (prehistoric,
rather) packages.
I assume you had a look at the excellent wiki page:
http://code.google.com/p/rdkit/wiki/BuildingOnCentOS. Which somehow goes a
long way at alleviating the pain.
I have two comments based on your email and my experience:
0. do *not* use gcc v4.1.x to build RDKit -- I am using v4.5.3. That is a
source of mishap and doom.
1. Your test failures point to a problem with the python tests. Your cmake
output indicates that boost-python was not found - hence, I suspect, the
problems. Do you have a libboost_python.so and is the path in your
LD_LIBRARY_PATH env variable? If not then you have to rebuild boost with
the python library as well as the regex one.
Cheers,
JP
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