I must correct myself, pandas was not installed, so the only test that
failed was "test3D".
----
Pozdrawiam, | Best regards,
Maciek Wójcikowski
mac...@wojcikowski.pl
2017-06-04 15:07 GMT+02:00 Maciek Wójcikowski <mac...@wojcikowski.pl>:
> I tried compiling Git master on armv8/arm64 Debian Sid (as mentioned
> before) and all tests but two passed.
>
> cmake .. -D
>> LD_LIBRARY_PATH="$RDBASE/lib:$PYROOT/lib:$LD_LIBRARY_PATH"
>> PYTHONPATH=$RDBASE:$PYTHONPATH ctest
>
>
> Failures:
>
>> 61: [12:08:04] -------------------------------------
>> 61: [12:08:04] 3D descriptor edge cases.
>> 61: [12:08:04]
>> 61:
>> 61: ****
>> 61: Test Assert
>> 61: Expression Failed:
>> 61: Violation occurred on line 456 in file /root/rdkit/Code/GraphMol/
>> Descriptors/test3D.cpp
>> 61: Failed Expression: fabs(val) < 1e-4
>> 61: ****
>> 61:
>> 61: terminate called after throwing an instance of 'Invar::Invariant'
>> 61: what(): Test Assert
>> 1/1 Test #61: test3D ...........................***Exception: Other
>> 1.76 sec
>>
>
>
> test 116
>> Start 116: pythonTestDirChem
>> 116: Test command: /usr/bin/python "/root/rdkit/rdkit/Chem/test_list.py"
>> "--testDir" "/root/rdkit/rdkit/Chem"
>> 116: Test timeout computed to be: 9.99988e+06
>> 116: ....
>> 116: ------------------------------------------------------------
>> ----------
>> 116: Ran 4 tests in 0.173s
>> 116:
>> 116: OK
>> 116: ......
>> 116: ------------------------------------------------------------
>> ----------
>> 116: Ran 6 tests in 0.169s
>> 116:
>> 116: OK
>> 116: ....[12:10:20]
>> 116:
>> 116: ****
>> 116: Pre-condition Violation
>> 116: valence not defined for atoms not associated with molecules
>> 116: Violation occurred on line 267 in file /root/rdkit/Code/GraphMol/
>> Atom.cpp
>> 116: Failed Expression: dp_mol
>> 116: ****
>> 116:
>
>
> And few others, like Pandas fail to import etc. If you want full
> tracestack I can upload it in separate file.
>
> ----
> Pozdrawiam, | Best regards,
> Maciek Wójcikowski
> mac...@wojcikowski.pl
>
> 2017-06-04 12:45 GMT+02:00 Samo Turk <samo.t...@gmail.com>:
>
>> I'll just install debian in chroot and test if armv7 binary from the repo
>> works.
>>
>> On Sat, Jun 3, 2017 at 9:00 PM, Maciek Wójcikowski <mac...@wojcikowski.pl
>> > wrote:
>>
>>> I have Odroid C2 (which is Rpi3 faster cousin), also armv8. Thats a myth
>>> rather than reality. Debian is almost 100% arm64 friendly (spoiler alert).
>>>
>>> I fired a Docker container with Debian Sid arm64 and installed RDKit
>>> from repo. All things work fine, unfortunately Conda is a no-go for now. I
>>> can try to compile RDKit from source and let you know how it went.
>>>
>>> ----
>>> Pozdrawiam, | Best regards,
>>> Maciek Wójcikowski
>>> mac...@wojcikowski.pl
>>>
>>> 2017-06-03 20:02 GMT+02:00 Samo Turk <samo.t...@gmail.com>:
>>>
>>>> It compiled successfully, unfortunately importing rdkit crashes python
>>>> interpreter (Segmentation fault). But I didn't have time to look more
>>>> closely into this. I successfully compiled rdkit on arm few years ago but
>>>> on raspberry pi (arm v6), this time it is a chromebook.
>>>>
>>>> @Maciek If you have rpi 3 in mind, I read that arm64 is not recommended
>>>> at this time since there is no support for vendor provided libraries..
>>>>
>>>> On Sat, Jun 3, 2017 at 5:00 PM, Maciek Wójcikowski <
>>>> mac...@wojcikowski.pl> wrote:
>>>>
>>>>> Has anyone try the Arm64 (aarch64)? Is it the same?
>>>>>
>>>>> ----
>>>>> Pozdrawiam, | Best regards,
>>>>> Maciek Wójcikowski
>>>>> mac...@wojcikowski.pl
>>>>>
>>>>> 2017-06-03 8:46 GMT+02:00 Gianluca Sforna <gia...@gmail.com>:
>>>>>
>>>>>> On Thu, Jun 1, 2017 at 12:03 AM, Samo Turk <samo.t...@gmail.com>
>>>>>> wrote:
>>>>>> > Thanks! It seems to work, but it's still compiling. Rockchip CPU in
>>>>>> my
>>>>>> > Chromebook is not very fast..
>>>>>> >
>>>>>>
>>>>>> How did it turn out? According to my Fedora builds, compiling is fine
>>>>>> but tests are going to fail :)
>>>>>>
>>>>>> --
>>>>>> Gianluca Sforna
>>>>>>
>>>>>> http://plus.google.com/+gianlucasforna - http://twitter.com/giallu
>>>>>> Tinker Garage - http://tinkergarage.it
>>>>>>
>>>>>> ------------------------------------------------------------
>>>>>> ------------------
>>>>>> Check out the vibrant tech community on one of the world's most
>>>>>> engaging tech sites, Slashdot.org! http://sdm.link/slashdot
>>>>>> _______________________________________________
>>>>>> Rdkit-discuss mailing list
>>>>>> Rdkit-discuss@lists.sourceforge.net
>>>>>> https://lists.sourceforge.net/lists/listinfo/rdkit-discuss
>>>>>>
>>>>>
>>>>>
>>>>
>>>
>>
>
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