Hi Petr, Welcome to the relax mailing lists! For your problem, what does relax say if you run the analysis with missing residues? Could you copy and paste the full output? Cheers. We have written the software to specifically handle this situation, and this should be automatic. For the relax developers reading this, for reference you can see this as the "missing" argument for the target function __init__() setup method at:
http://www.nmr-relax.com/api/4.0/target_functions.relax_disp-pysrc.html#Dispersion.__init__ If you see an error message, then this is a bug. relax is designed to handle every situation automatically - you should never, ever have to revert to such tricks to get relax to work. If you do see an error, it would be appreciated if you could create a bug report about the problem at: https://gna.org/bugs/?func=additem&group=relax Ideally, if you could attach a script and truncated data files (with maximally 2-3 residues, slightly randomised, if you wish), that would be appreciated. If the problem can be quickly reproduced with the attached files, then I can convert that in to a relax system test. I normally then only need 5-10 minutes to eliminate such a bug. Cheers, Edward On 22 April 2016 at 14:18, Petr Padrta <pad...@ncbr.muni.cz> wrote: > Hello everybody, > > I'm analysing some CPMG data with the auto-analysis script > (sample_scripts/relax_disp/cpmg_analysis.py). Problem is that I don't have the > same set of spectra for all my residues, i.e. there are missing residues in > some of the peak lists and relax doesn't like that. So far I bypass the > problem > by generating residue-specific peak lists and running the analyses separately > for individual residues but that's 1) tedious and 2) I'm unable to run > clustered analysis unless I shave the spectra list to "common denominator". I > also tried setting the missing intensities to "None" or to "NA" but that's not > working. Any ideas? > > ---------------------------------------------------------------------- > > Petr Padrta > > _______________________________________________ > relax (http://www.nmr-relax.com) > > This is the relax-users mailing list > relax-users@gna.org > > To unsubscribe from this list, get a password > reminder, or change your subscription options, > visit the list information page at > https://mail.gna.org/listinfo/relax-users _______________________________________________ relax (http://www.nmr-relax.com) This is the relax-users mailing list relax-users@gna.org To unsubscribe from this list, get a password reminder, or change your subscription options, visit the list information page at https://mail.gna.org/listinfo/relax-users