Re: [Dspace-tech] File submission in DSpace 5.2/JSPUI

2015-08-12 Thread Becker, Pascal-Nicolas
Hi,

my colleague Fabian Fürste and me, we created a PR against DS-2623 as of today. 
Should be fixed in DSpace 6.

Regards,
  Pascal

https://github.com/DSpace/DSpace/pull/1013

 -Original Message-
 From: Oliver Goldschmidt [mailto:o.goldschm...@tuhh.de]
 Sent: Tuesday, June 30, 2015 10:39 AM
 To: dspace-tech dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] File submission in DSpace 5.2/JSPUI
 
 Eike,
 
 thank you for your reply and the links. Good to know that there is already a
 bug report about that.
 
 I have also removed the file description input field in jspui/submit/choose-
 file.jsp. You are right, its still possible to enter a description for any of 
 the files
 on the file review page, and its working perfectly at this point. So this
 solution is absolutely ok for me.
 
 Thanks,
 Oliver
 
 Am 30.06.2015 um 08:40 schrieb Kleiner Eike (klie):
  Hey Oliver,
 
  I had the same problem and created a ticket in Jira:
 https://jira.duraspace.org/browse/DS-2623 Until now I had not the time for a
 deeper investigation.
 
  Donald I Macdonald and Michael White reported and analyzed this already
 on [Dspace-tech]:
 http://sourceforge.net/p/dspace/mailman/message/33355373/ There exists
 a fix from Donald Macdonald, but it does not work for multiple files.
 
  It seems to be not only a technical but also a conceptual flaw that you can
 upload multiple files but add only one description during the upload step. I
 removed the description field from the upload step as a temporary solution
 for our local repository. Users can still enter descriptions for all files on 
 the
 step following the file upload.
 
  Regards
  Eike
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  -Ursprüngliche Nachricht-
  Von: Oliver Goldschmidt [mailto:o.goldschm...@tuhh.de]
  Gesendet: Montag, 29. Juni 2015 13:39
  An: dspace-tech
  Betreff: [Dspace-tech] File submission in DSpace 5.2/JSPUI
 
  Hello DSpacers,
 
  I have a problem on DSpace 5.2 (I don't know if it is also happening on 
  5.1; I
 will try that).
 
  Anytime I set a file description to a submission in DSpace I get a error
 message and submission procedure terminates. Looking into the incomplete
 submissions in My DSpace is working and shows the submission with the
 file - but this is anything but convenient.
 
  The error message is not a Server error, it is indicating a malformed
  request:
  
  System Error: Malformed Request
 
  There was an inconsistency in the data received from your browser. This
 may be due to one of several things:
 
  Sometimes, if you used your browser's back button during an
 operation like a submission, clicking on a button may try and do something
 that's already been done, such as commit the submission to the archive.
 Clicking your browsers reload or refresh button may have similar results.
  If you got here by following a link or bookmark provided by someone
 else, the link may be incorrect or you mistyped the link. Please check the 
 link
 and try again.
  If you have more than one browser window open with DSpace, this can
 cause a similar problem whereby a button clicked in one window may make a
 button click in the other window invalid.
  Of course, you may have uncovered a problem with the system! All of
 these errors are logged, and we'll be checking them regularly to see if there
 is a problem.
 
  If the problem persists, please contact the DSpace site administrators
  
 
  This is what I see in my logfile:
  2015-06-29 13:20:37,931 WARN
  org.dspace.app.webui.submit.step.JSPUploadStep @
  o.goldschm...@tuhh.de:session_id=xxx:ip_addr=134.28.x.y:integrity_erro
  r:--
  URL Was\colon; https\colon;
  //dspace5.tub.tuhh.de/submit
  -- Method\colon; POST
  -- Parameters were\colon;
  -- workspace_item_id\colon; 1288
  -- jsp\colon; /submit/choose-file.jsp
  -- page\colon; 1
  -- ajaxUpload\colon; false
  -- description\colon; Was zum...?!
  -- file\colon; 
  -- submit_upload\colon; Weiter 
  -- step\colon; 4
 
  2015-06-29 13:20:37,931 DEBUG org.dspace.app.webui.util.JSPManager @
 
 o.goldschm...@tuhh.de:session_id=xxx:ip_addr=134.28.x.y:view_jsp:/erro
  r/integrity.jsp
 
  Any ideas, what exactly is going wrong here?
 
  Thank you,
  Oliver
 
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Re: [Dspace-tech] retrospectively assigning DOIs to live items

2015-08-03 Thread Becker, Pascal-Nicolas
Hi Claudia, Hi Andrea,

 On 03/08/15 1:48 AM, Andrea Schweer wrote:
  On 03/08/15 11:16, Claudia Jürgen wrote:
  yes this is right. If you enable the identifier service this will only
  cover new items.
  Assuming you are using the DataCite Connector,  the easiest way would
  be to manipulate the database (usual warnings about that) to give the
  old items the status of newly items in archive:
  INSERT into doi (doi_id, doi, resource_type_id, resource_id, status)
  SELECT nextval('doi_seq'),
 
  concat('YOURPREFIX/YOURNAMESPACESEPARATOR-',currval('doi_seq')), 2,
  item_id, 7 FROM item WHERE in_archive=true and item_id not in (select
  resource_id from doi where resource_type_id=2);
 
  Then the cron job for the usual doi-organiser commands will pick up the
 job.
 
 Perfect, thanks a lot for that!

It should be easy to add a command in the doi-organiser that adds those entries 
into the database. I just didn't had the use case and the time. ;-)

  I've just been investigating the use of doi's for us. There are a couple of
  issues with it, especially the datacite connector crosswalk and data 
  provider,
  see the latest JIRA issues.
  At the moment with datacite the update of metadata does not work
  among other things.

Thanks for reporting those issues! It worked fine once and is still working 
here (highly patched DSpace 4). I hope I find some time to look into those, but 
no promises...

Regards,
  Pascal

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Re: [Dspace-tech] Build DSpace Installer on Different Machine

2015-07-02 Thread Becker, Pascal-Nicolas
Hi,

to answer your question: yes, ant needs more than the dspace-installer 
directory. It tries to download a free geodb to connect IPs to countries for 
the statistic (IIRC).

We have a build server which is configured close to our production server (the 
build server runs centOS, the production server RHEL, but it works fine). On 
the build server I run maven *and* ant. I install DSpace on the build server to 
the same path that is used on the production server. Then I create a package 
(currently a tar, but we plan to build rpms here) and deploy this package on 
our test and production server. With DSpace 5 we will have to take care for our 
solr indexes as with DSpace 5 ant takes care for those. But that’s possibly a 
matter for another thread…

Regards,
  Pascal



From: Peter Dietz [mailto:pe...@longsight.com]
Sent: Wednesday, July 01, 2015 4:52 PM
To: Shannon Meisenheimer
Cc: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Build DSpace Installer on Different Machine

Hi Shannon,

We do almost all builds using a dedicated build server. So one machine does the 
mvn package portion of the work, and then dspace/target/dspace-installer gets 
ftp/scp/rsync to application servers, and then on the app server does the ant 
update portion. The thing that you have to ensure is that each machine is very 
similar. Same OS, same version of java. I've never tried this with windows, but 
it works well for us on Linux.


Peter Dietz
Longsight
www.longsight.comhttp://www.longsight.com
pe...@longsight.commailto:pe...@longsight.com
p: 740-599-5005 x809

On Wed, Jul 1, 2015 at 10:24 AM, Shannon Meisenheimer 
meisenhei...@ucmo.edumailto:meisenhei...@ucmo.edu wrote:
Has anyone tried building DSpace (Maven) on a different machine and then moving 
the resulting src package to the server for Ant install/update?

We are pretty sure we are fighting network restrictions on the server when 
building DSpace 5.1 with Mirage 2.  I'm running 'mvn -U clean package 
-Dmirage2.on=true -X  c:\Maven5_1.log' using Maven 3.2.3 and after 
installation, pdf delivery is very slow (sometimes 10-20 minutes).

I was thinking I could build the package on my workstation where I'm not being 
firewalled as heavily and then transfer to the server for install.

We've had our network team add FW exceptions allowing outbound from the server 
to any destination on ports 80, 443, and 9418 and outbound to any for the 
server in our proxy, but still are seeing some performance issues post install. 
Setting up the proxy in Maven had no effect.

Does Ant use anything other what it is in the source package during install? I 
noticed maven created a bunch of files in my user'e temp folder (win server).

Thanks,
Shannon
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Re: [Dspace-tech] Changing embargo dates in DSpace 5.2

2015-07-02 Thread Becker, Pascal-Nicolas
Hi,

if you use the JSPUI this should be fixed in DSpace 5.2. See the ticket in Jira 
describing the problem and its solution: 
https://jira.duraspace.org/browse/DS-1965. Starting with DSpace 5.2 you should 
see the date fields in the administrator interface you use to edit 
authorizations (login as admin, open an item, click on edit, click on edit, 
click on authorizations, look for the policy you want to change and click on 
edit).

While writing this mail I see that the dates are not part of the table listing 
all authorizations of an item. We should change this too. I create the ticket 
DS-2638 and marked it as needs volunteer.

Kind regards,
  Pascal


From: George Stanley Kozak [mailto:g...@cornell.edu]
Sent: Wednesday, July 01, 2015 8:09 PM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Changing embargo dates in DSpace 5.2

Hi...

How do people handle changing the Embargo dates in DSpace 5.2?

As far as I can tell, once an item has been submitted as embargoed, it can only 
be changed by manually modifying the resourcepolicy table.  Am I wrong of is 
there  a programmatic way to change the dates?

George Kozak
Digital Library Specialist
Cornell University Library Information Technologies (CUL-IT)
218 Olin Library
Cornell University
Ithaca, NY 14853
607-255-8924


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Re: [Dspace-tech] Changing embargo dates in DSpace 5.2

2015-07-02 Thread Becker, Pascal-Nicolas
Hi,

DSpace currently has two Embargo mechanisms: one that work with lift date and a 
cronjob (named as Pre Dspace 3 Embargo) and one that works with start date on 
policies (named as past DSpace 3 Embargo functionality). The latter one sets 
resource policies whenever an embargo is set but it restricts their validity by 
dates. So if you're updating the psql table manually you probably should change 
the *start_date* and not the end date as we do not have policies that forbid 
something but only policies that allow g.e. the read access (beginning with the 
specified start_date).

Regards,
  Pascal

From: George Stanley Kozak [mailto:g...@cornell.edu]
Sent: Thursday, July 02, 2015 3:45 PM
To: Becker, Pascal-Nicolas; dspace-tech@lists.sourceforge.net
Subject: RE: Changing embargo dates in DSpace 5.2

Thank you, Pascal.
We are using DSpace 5.2 XMLUI Mirage 2 (I should have mentioned that earlier).  
  It would be nice to change the dates in the Admin interface, but this is 
helpful.
I guess my process now will be:

1)  Login in as Admin

2)  Open and item and edit

3)  Click on Authorizations

4)  Find the bitstream in the list and note the bitstream ID

5)  If I plan to change the Embargo date, then from the command line I will 
go to psql and do

a.   update resorcepolicy set end_date=whatever you want where 
resource_id=bitstream id noted above;

Again, thanks for your help (and to Hilton Gibson, too!)

George Kozak
Digital Library Specialist
Cornell University Library Information Technologies (CUL-IT)
218 Olin Library
Cornell University
Ithaca, NY 14853
607-255-8924

From: Becker, Pascal-Nicolas [mailto:p.bec...@tu-berlin.de]
Sent: Thursday, July 02, 2015 4:44 AM
To: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Cc: George Stanley Kozak
Subject: RE: Changing embargo dates in DSpace 5.2

Hi,

if you use the JSPUI this should be fixed in DSpace 5.2. See the ticket in Jira 
describing the problem and its solution: 
https://jira.duraspace.org/browse/DS-1965. Starting with DSpace 5.2 you should 
see the date fields in the administrator interface you use to edit 
authorizations (login as admin, open an item, click on edit, click on edit, 
click on authorizations, look for the policy you want to change and click on 
edit).

While writing this mail I see that the dates are not part of the table listing 
all authorizations of an item. We should change this too. I create the ticket 
DS-2638 and marked it as needs volunteer.

Kind regards,
  Pascal


From: George Stanley Kozak [mailto:g...@cornell.edu]
Sent: Wednesday, July 01, 2015 8:09 PM
To: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Changing embargo dates in DSpace 5.2

Hi...

How do people handle changing the Embargo dates in DSpace 5.2?

As far as I can tell, once an item has been submitted as embargoed, it can only 
be changed by manually modifying the resourcepolicy table.  Am I wrong of is 
there  a programmatic way to change the dates?

George Kozak
Digital Library Specialist
Cornell University Library Information Technologies (CUL-IT)
218 Olin Library
Cornell University
Ithaca, NY 14853
607-255-8924


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Re: [Dspace-tech] Linked Open Data

2015-02-04 Thread Becker, Pascal-Nicolas
Hi Emilio,

you can use http://demo.dspace.org.
Currently the endpoint is here: 
http://trydspace5.longsight.com/demo-dspace-org-sparql
It will probably move within the next two weeks (to be located directly on 
demo.dspace.org).
As long as the LOD-Support is switched on on demo.dspace.org you'll find the 
address of the SPARQL endpoint here: 
http://trydspace5.longsight.com/demo-dspace-org-sparql (look for the 
void:sparqlEndpoint predicate).

Regards,
  Pascal

 -Original Message-
 From: emilio lorenzo [mailto:elore...@arvo.es]
 Sent: Wednesday, February 04, 2015 1:25 PM
 To: dspace-tech
 Subject: [Dspace-tech] Linked Open Data
 
 Hello
 Is there any repository or testing machine where I can test the sparql
 endpoint of Dspace V5 ?
 
 Thanks
 
 Emilio
 
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Re: [Dspace-tech] HANDLE table entries without resource_id

2015-02-03 Thread Becker, Pascal-Nicolas
If a handle gets deleted sets the resource_id to null and keep all the other 
information (basically resource_type and the handle itself). If something with 
an handle is getting restored from an AIP backup, DSpace checks whether the 
resource_type_id of the handle in the database is the same as of the 
DSpaceObject being restored from AIP. Handles are Persistent Identifier. Nobody 
wants a persistent identifier to change, because then it wouldn't be persistent 
anymore. ;-) That is the reason DSpace ensures that at least the resource_type 
of a deleted and restored handle doesn't change. I won't delete them as they 
don't disturbe you and as it is wanted behavior.

Regards,
  Pascal

From: Monika C. Mevenkamp [mailto:moni...@princeton.edu]
Sent: Monday, February 02, 2015 3:25 PM
To: dspace-tech@lists.sourceforge.net Tech
Subject: [Dspace-tech] HANDLE table entries without resource_id

the query

SELECT HANDLE_ID, RESOURCE_TYPE_ID, RESOURCE_ID, HANDLE  FROM HANDLE WHERE 
RESOURCE_ID  IS NULL;

finds a couple entries

Is there a reason why I should not delete them ?

Monika


Monika Mevenkamp
phone: 609-258-4161
693 Alexander Road, Princeton University, Princeton, NJ 08544

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Re: [Dspace-tech] JSPUI

2014-09-29 Thread Becker, Pascal-Nicolas
First step would be to see if tomcat loaded the DSpace webapps (at least JSPUI 
and depending on the version of DSpace your working with probably SOLR) 
correctly. You can use one of the common webapps for tomcat like manager or 
take a look in the logs of your tomcat.

Regards,
  Pascal

From: Mary Weppler-Selear [mailto:mweppler-sel...@ucmerced.edu]
Sent: Friday, September 26, 2014 10:21 PM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] JSPUI


​I have a version of DSpace that was configured almost a year ago.  My 
organization just procured a hosted VPS, and I'm ready to move the DSpace 
platform over to the VPS.  However, when I try to view the web app, the url 
that I used after an ifconfig command is not working:

http://169.236.85.39:8080/jspui/

Though if I remove the jspui it appears that Tomcat is okay.



It was working fine before.  Any advice on how to view the web app?



Mary ​


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Re: [Dspace-tech] JSPUI reverse proxy authentication

2014-09-03 Thread Becker, Pascal-Nicolas
Hi,

does the dspace.log log file contains any entries like the following one?

2014-MM-DD HH:MM:SS,YYY WARN org.dspace.app.webui.util.UIUtil @ POSSIBLE 
HIJACKED SESSION: request from XXX.XXX.XXX.XXX does not match original session 
address: XXX.XXX.XXX.XXX. Authentication rejected.

How are the configuration properties dspace.baseUrl and dspace.url set?

Regards,
  Pascal Becker

From: Fitzpatrick, Christopher [mailto:c...@wmu.se]
Sent: Wednesday, September 03, 2014 9:37 AM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] JSPUI reverse proxy authentication

Hi All,
I just setup dspace for the first time. We're wanting to use the jspui 
interface. I setup nginx as a reverse proxy in front of tomcat, but it seems 
that the authentication is not sticking. What I mean by that is I can 
authenticate a user, and the page does show that I am logged in ( and I have 
access to certain restricted pages). But the user will lose its session after a 
couple of minutes or on certain pages.
This is not happening if I access tomcat directly at port 8080, so I think 
there's something I'm missing on my nginx conf. ( included below ).
Any ideas? Thanks for the help...b,chris,

 location / {
proxy_pass  http://dspace;
proxy_next_upstream error timeout invalid_header http_500 http_502 
http_503 http_504;
proxy_redirect http://dspace http://dlib.wmu.se;

proxy_buffering off;
proxy_store off;

proxy_connect_timeout 120;
proxy_send_timeout120;
proxy_read_timeout120;

proxy_set_header X-Forwarded-Host $host;
proxy_set_header X-Forwarded-Server $host;
proxy_set_header X-Forwarded-For $proxy_add_x_forwarded_for;
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[Dspace-tech] German DSpace User Group Meeting

2014-08-27 Thread Becker, Pascal-Nicolas
*** German version below ***

Dear Colleagues,

the university library of Technische Universität Berlin would like to invite to 
a German DSpace User Group Meeting on Tuesday, October 28, 2014, 11 a.m. - 5 
p.m. The meeting should be an informal exchange about typical topics of DSpace 
Installations in Germany as g.e. how to support xMetaDissPlus as format for 
OAI-PMH to export thesis to the German National Library. The Meeting language 
is German. We kindly ask to send us an email if you are interested in joining 
the Meeting. Please suggest topics you are interested in, topics you are 
willing to talk about and if you would like to join a dinner on a self-payment 
basis.

The Meeting will take place at:
Technische Universität Berlin
Universitätsbibliothek
Fasanenstr. 88
(im Volkswagen-Haus)
10623 Berlin
Room BIB-215

Regards,
  Pascal Becker


*** German version ***
Liebe Kolleginnen und Kollegen,

die Universitätsbibliothek der TU Berlin lädt zu einem Treffen deutscher DSpace 
User am Dienstag, den 28. Oktober 2014 von 11 bis 17 Uhr. Das Treffen soll als 
informeller Austausch über Themen dienen, die speziell DSpace Installationen in 
Deutschland betreffen, zum Beispiel die Unterstützung von xMetaDissPlus als 
Format für die OAI-Schnittstelle. Das Treffen wird in deutscher Sprache 
stattfinden. Wir bitten höflichst um eine Anmeldung per E-Mail. Geben Sie dabei 
bitte Themen an, an denen Sie interessiert sind, Themen, die Sie beitragen 
können und ob Sie Interesse an einem gemeinsamen Abendessen auf 
Selbstzahlerbasis haben.

Das Treffen findet statt in der:
Technische Universität Berlin
Universitätsbibliothek
Fasanenstr. 88
(im Volkswagen-Haus)
10623 Berlin
Raum BIB-215

Mit freundlichen Grüßen,
  Pascal Becker

--  
Pascal-Nicolas Becker
Technische Universität Berlin - Universitätsbibliothek 
Fasanenstr. 88 (im VOLKSWAGEN-Haus) - 10623 Berlin
Tel.: +49 30 314-76345 - p.bec...@tu-berlin.de


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Re: [Dspace-tech] Very old Dspace 1.2.1 Upgrade errors

2014-08-12 Thread Becker, Pascal-Nicolas
Have you seen Tim’s mail? Do you get any error messages, in your browser, on 
the command line (while reindexing) or in the logs?

Did you deploy the web-app dspace-solr?

Regards,
  Pascal

From: vinod mishra [mailto:mishrav...@gmail.com]
Sent: Monday, August 11, 2014 7:56 PM
To: Becker, Pascal-Nicolas
Cc: dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] Very old Dspace 1.2.1 Upgrade errors

Yes i did several times and in right order step by step. database shows all the 
records from admin interface, each item i can see by searching with 
record/handle number, at the same time when i update any item it becomes 
search-able and visible to all but when again i rebuild index all disappears. 
It also shows repeated many fields of single dc  entry like
handle number it shows thrice :

http://hdl.handle.net/2080/1593
http://hdl.handle.net/2080/1593
http://hdl.handle.net/2080/1593
Pls suggest.

On Mon, Aug 11, 2014 at 8:09 PM, Becker, Pascal-Nicolas 
p.bec...@tu-berlin.demailto:p.bec...@tu-berlin.de wrote:
Did you use all SQL-Scripts in the right order while performing step 4 
upgrading of the replicated database? Did any errors occurred during this 
step?

Regards,
  Pascal

 -Original Message-
 From: Tim Donohue 
 [mailto:tdono...@duraspace.orgmailto:tdono...@duraspace.org]
 Sent: Monday, August 11, 2014 4:14 PM
 To: vinod mishra; 
 dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] Very old Dspace 1.2.1 Upgrade errors

 Hello,

 Can you send us the exact error messages you are seeing? It's difficult to
 determine the upgrade problem without more information about what did
 not work, or what errors are being reported.

 Here's more information on tracking down the error messages in DSpace:
 https://wiki.duraspace.org/display/DSPACE/Troubleshoot+an+error

 - Tim

 On 8/9/2014 5:02 AM, vinod mishra wrote:
  Dear All,
 
  I ma trying to upgrade very old DSpace to 4.2 version, system
  configuration are given below. I am trying with the instructions given
  on
  https://wiki.duraspace.org/display/DSDOC4x/Multi-
 Version+Upgrade+Tips+
  and+Tricks under the  Option 2: Install Fresh and Upgrade your Data.
  Only one data appear in the latest version 4.2 but rest does not after
  restoration.
 
  I do not know the the other methods nor understand the actual problem
  and how to resolve it but i exactly followed the instructions given on
  the above site. Thefore you are requested to kindly let me know the
  other things apart from instructions which i have to perform. My data
  dump is available at :
 
 
 https://drive.google.com/file/d/0B2Cmcc6xutSgMmRUNENDTWt0Y1U/edit?
 usp=
  sharing . If possible kindly download and make it compatible with
  latest version
  4.2 so that i can directly restore it, i shall be very grateful for
  the same. However i am trying my level best kindly give you suggestion .
 
  OS: Red hat 3
  DSpace: 1.2.1
  Tomcat: 1.2
  Postgres: 7.2
  Also Use handle number.
 
  --
  With Regards,
  Vinod Kumar Mishra,
  Assistant Librarian,
  Biju Patnaik Central Library (BPCL),
  NIT Rourkela.
  Mob:91+9439420860
 
 
  --
  
 
 
 
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NIT Rourkela.
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Re: [Dspace-tech] Very old Dspace 1.2.1 Upgrade errors

2014-08-11 Thread Becker, Pascal-Nicolas
Did you use all SQL-Scripts in the right order while performing step 4 
upgrading of the replicated database? Did any errors occurred during this 
step?

Regards,
  Pascal

 -Original Message-
 From: Tim Donohue [mailto:tdono...@duraspace.org]
 Sent: Monday, August 11, 2014 4:14 PM
 To: vinod mishra; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] Very old Dspace 1.2.1 Upgrade errors
 
 Hello,
 
 Can you send us the exact error messages you are seeing? It's difficult to
 determine the upgrade problem without more information about what did
 not work, or what errors are being reported.
 
 Here's more information on tracking down the error messages in DSpace:
 https://wiki.duraspace.org/display/DSPACE/Troubleshoot+an+error
 
 - Tim
 
 On 8/9/2014 5:02 AM, vinod mishra wrote:
  Dear All,
 
  I ma trying to upgrade very old DSpace to 4.2 version, system
  configuration are given below. I am trying with the instructions given
  on
  https://wiki.duraspace.org/display/DSDOC4x/Multi-
 Version+Upgrade+Tips+
  and+Tricks under the  Option 2: Install Fresh and Upgrade your Data.
  Only one data appear in the latest version 4.2 but rest does not after
  restoration.
 
  I do not know the the other methods nor understand the actual problem
  and how to resolve it but i exactly followed the instructions given on
  the above site. Thefore you are requested to kindly let me know the
  other things apart from instructions which i have to perform. My data
  dump is available at :
 
 
 https://drive.google.com/file/d/0B2Cmcc6xutSgMmRUNENDTWt0Y1U/edit?
 usp=
  sharing . If possible kindly download and make it compatible with
  latest version
  4.2 so that i can directly restore it, i shall be very grateful for
  the same. However i am trying my level best kindly give you suggestion .
 
  OS: Red hat 3
  DSpace: 1.2.1
  Tomcat: 1.2
  Postgres: 7.2
  Also Use handle number.
 
  --
  With Regards,
  Vinod Kumar Mishra,
  Assistant Librarian,
  Biju Patnaik Central Library (BPCL),
  NIT Rourkela.
  Mob:91+9439420860
 
 
  --
  
 
 
 
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Re: [Dspace-tech] CC-license and HTTPS in JSPUI

2014-07-30 Thread Becker, Pascal-Nicolas
Hi Oliver,

I just read your mail from yesterday again. If I understand correctly it works 
sometimes and sometimes not. May this be a cache problem? If you are using 
XMLUI you should clean it's cache as well as the browser cache. This is just a 
bold guess, but may be worth to clean all caches and try your solution once 
again...

Even if it is not a DSpace issue can you please repot a solution if you find 
one?

Regards,
  Pascal

 -Original Message-
 From: Oliver Goldschmidt [mailto:o.goldschm...@tuhh.de]
 Sent: Wednesday, July 30, 2014 11:23 AM
 To: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] CC-license and HTTPS in JSPUI
 
 Hi,
 
 I was able to solve this issue - at least for Firefox. As described here [1], 
 you
 can leave out the protocol and reference ambedded external websites with
 //example.org. Doing that, its referenced via the same protocol as the
 embedding page. Unfortunately, this only works with Firefox (definitely not
 with Chromium, havent tried it with IE yet).
 Though, a compatible solution for all browsers of course would be more
 appropriate...
 
 But this is obviously not a DSpace issue, so I will stop reporting it here.
 
 Best regards
 Oliver
 
 [1]
 https://developer.mozilla.org/en-
 US/docs/Security/MixedContent/How_to_fix_website_with_mixed_conten
 t
 
 Am 30.07.2014 um 10:05 schrieb Oliver Goldschmidt:
  Hi again,
 
  I now retried what I described yesterday in a different browser
  (yesterday it was Firefox, today I am trying Chromium) to see if my
  HTTPS-CC-issue is reproducable there. Answer: it is reproducable, and
  its even worse. Although I am referencing
  https://creativecommons.org/choose/?partner=dspace(...) , I get that
  error message: [blocked] The page at 'https://xyz.tuhh.de/submit' was
  loaded over HTTPS, but ran insecure content from
  'http://creativecommons.org/choose/?partner=dspace(...)': this content
  should also be loaded over HTTPS.
 
  In Chromium, the problem is already on the cc-licence-page: the iframe
  is white without any content.
 
  Any ideas?
 
  Best regards
  Oliver
 
  Am 29.07.2014 um 17:19 schrieb Oliver Goldschmidt:
  Hello all,
 
  I have a very weird problem with creativecommons.org and DSpace.
  Perhaps anyone here has an idea about that.
  The scenario is the following: I have DSpace configured, that its
  always loaded over HTTPS (by redirecting any call to Port 443). That
  works fine. But coming to the publication there is a problem. I have
  also enabled the CC-license step. As I reached that step in the
  publication process, I only got a white page inside the cc-iframe. I
  figured out, why that happened: a URL at creativecommons.org is
  embedded in an iframe, and loading a normal HTTP-URL in a HTTPS page
  iframe is forbidden. Though, I changed the URL of creativecommons.org
  in submit/creative-commons.jsp to its HTTPS-equivalent:
  https://creativecommons.org/choose/?partner=dspace.
  Now it worked and I got the creativecommons-page inside the iframe.
  But something is still wrong: I cannot select a license. Its getting
  blocked, because the browser is still getting mixed content.
  Obviously the creativecommons.org-page is not loaded via HTTPS, but
  via HTTP, although the URL points to HTTPS (and is displayed in the
  HTTPS-iframe, while its not displayed using the HTTP-URL). I can even
 reproduce this:
  clicking on the link
  https://creativecommons.org/choose/?partner=dspace
  gets me to the unencrypted version of the page. Only when I manually
  edit the URL in my browser window, I get to the real HTTPS address.
  Thats really odd...
 
  Perhaps someone can reproduce that or has an idea how to fix that.
 
  Any hints are appreciated!
 
  Best regards
  Oliver
 
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Re: [Dspace-tech] IPv4/6 double stack setup and session hijacking prevention

2014-07-03 Thread Becker, Pascal-Nicolas
Maybe, but the downside is that DSpace cannot be used in a IPv4/IPv6 dual stack 
setup currently. And those will become more and more common...

 -Original Message-
 From: Alan Orth [mailto:alan.o...@gmail.com]
 Sent: Wednesday, July 02, 2014 9:49 PM
 To: Becker, Pascal-Nicolas; dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] IPv4/6 double stack setup and session hijacking
 prevention
 
 Well, if this *was* a session hijacking attempt... wouldn't it look exactly 
 like
 this?  ie, DSpace would be actually protecting you. :)
 
 Alan
 
 On 06/08/2014 03:34 PM, Becker, Pascal-Nicolas wrote:
  Hi,
 
 
  today I used my test installation of DSpace for the first time from
  home where I have IPv4 and IPv6 in a dual stack setup. My server has
  an IPv4 and IPv6 connection as well, but in my office I currently have
  IPv4 only. So today I was using DSPACE JSPUI (master branch from early
  may
  2014) in a IPv4/IPv6 dual stack setup for the first time.
 
 
  While using DSpace I was asked to login every two minutes. As this was
  quite annoying I looked in to dspace.log and found the following line:
 
 
  2014-06-08 14:01:13,201 WARN  org.dspace.app.webui.util.UIUtil @
  POSSIBLE HIJACKED SESSION: request from
  2001:6f8:::::: does not match original
 session
  address: 85.XXX.XXX.XXX. Authentication rejected.
 
 
  I think the problem is obvious: My mac is alternating using IPv4 and
  IPv6 to connect to my DSpace installation. DSpace detects this as a
  possible session hijacking attack and invalidates my session.
 
 
  Has anyone had the same problem (already)? Has anyone an idea how to
  solve this problem? And please don't suggest me to use either IPv4 or
  IPv6. ;-)
 
 
  Regards,
 
Pascal
 
 
  P.S. A solution could be to save a IPv4 and a IPv6 address to prevent
  session hijacking while supporting IPv4/6 double stack setups. But
  even then we could run into problems with IPv6 privacy extensions...
 
 
 
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[Dspace-tech] IPv4/6 double stack setup and session hijacking prevention

2014-06-08 Thread Becker, Pascal-Nicolas
Hi,


today I used my test installation of DSpace for the first time from home where 
I have IPv4 and IPv6 in a dual stack setup. My server has an IPv4 and IPv6 
connection as well, but in my office I currently have IPv4 only. So today I was 
using DSPACE JSPUI (master branch from early may 2014) in a IPv4/IPv6 dual 
stack setup for the first time.


While using DSpace I was asked to login every two minutes. As this was quite 
annoying I looked in to dspace.log and found the following line:


2014-06-08 14:01:13,201 WARN  org.dspace.app.webui.util.UIUtil @ POSSIBLE 
HIJACKED SESSION: request from 2001:6f8:::::: does not 
match original session address: 85.XXX.XXX.XXX. Authentication rejected.


I think the problem is obvious: My mac is alternating using IPv4 and IPv6 to 
connect to my DSpace installation. DSpace detects this as a possible session 
hijacking attack and invalidates my session.


Has anyone had the same problem (already)? Has anyone an idea how to solve this 
problem? And please don't suggest me to use either IPv4 or IPv6. ;-)


Regards,

  Pascal


P.S. A solution could be to save a IPv4 and a IPv6 address to prevent session 
hijacking while supporting IPv4/6 double stack setups. But even then we could 
run into problems with IPv6 privacy extensions...
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Re: [Dspace-tech] DOI versioning

2014-05-23 Thread Becker, Pascal-Nicolas
Hi Kyle,

I have not tested DOIs together with versioning yet. I think that a 
DOIVersioningIdentifierProvider is needed, but that's just a bold guess.

Regards,
  Pascal

From: Kyle Braak [GBIF] [mailto:kbr...@gbif.org]
Sent: Friday, May 23, 2014 4:42 PM
To: b...@mire.be; Becker, Pascal-Nicolas
Cc: GBIF Developers Developers
Subject: DOI versioning

Hi Bram and Pascal-Nicolas,

My name is Kyle Braak, I'm a developer at the GBIFhttp://www.gbif.org/ 
Secretariat in Copenhagen.

I am writing you, since you were the last people to edit the wiki pages DSPace 
Item Level 
Versioninghttps://wiki.duraspace.org/display/DSDOC4x/Item+Level+Versioning 
and DOI Digital Object 
Identifierhttps://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier.

First off, thanks for taking the time to write such great documentation. I 
really enjoyed reading these pages.

Just a quick question for you about DOI versioning, if you can spare a minute?

In the Version History example used in the wiki (image attached), the item 
identifier appears to be the handle. What I'd like to know, is whether you 
assign a new DOI to each version of an item, and if so, how the new DOI looks 
like, and how you preserve the relationship between older versions of the DOIs?

Thank you in advance for your time,

Kyle Braak
Developer
Secretariat of the Global Biodiversity Information Facility (GBIF)
Universitetsparken 15, DK-2100 Copenhagen Ø
Denmark, Europe
+45 353 21479 (work)
Skype: kyle.braak
www.gbif.orghttp://www.gbif.org/



A.
[cid:image001.png@01CF76B1.A8C697F0]
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Re: [Dspace-tech] Dspace 4.1 and Datacite

2014-05-22 Thread Becker, Pascal-Nicolas
Glad to hear that, thanks for giving us the follow-up.

Regards,
  Pascal

From: Heiki Epner [mailto:heiki.ep...@ut.ee]
Sent: Thursday, May 22, 2014 8:27 AM
To: Becker, Pascal-Nicolas
Cc: dspace-tech@lists.sourceforge.net
Subject: RE: [Dspace-tech] Dspace 4.1 and Datacite


Dears



After replacing test-prefix 10.5072 with one real prefix, it seems to be 
working.

Simply and dummy.



With best regards

Heiki

So, 16-05-2014 15:35 kirjutas Becker, Pascal-Nicolas:
Hi Heiki,

can you please run the following commands in the specified order and send me 
the output on the command line and what they logged in dspace.log?
… doi-organiser –l
… doi-organiser –u
… doi-organiser –s
… doi-organiser –r
… doi-orgainser –l

You can read more on the relevance of the order of the commands here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-%27cron%27jobforasynchronousreservation/registration

Regards,
  Pascal



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[Dspace-tech] FW: Error in enabling media filter

2014-05-19 Thread Becker, Pascal-Nicolas
Forwarding the solution to dspace-tech, in case anyone reads this in the 
mailinglists archive.
---BeginMessage---
Hi Pascal,

Thanks for your quick response.
Root caused, Found the exception due to calling filter-media command in wrong 
location.

Thanks,
Anoj

On Fri, May 16, 2014 at 4:58 AM, Becker, Pascal-Nicolas 
p.bec...@tu-berlin.demailto:p.bec...@tu-berlin.de wrote:
Hi,

I don't think that the problem comes from changing the dspace.cfg. The 
exception message is that the class 
org.springframework.core.io.ClassPathResource couldn't be found. Probably some 
jars are missing? Can you execute other commands over the dspace command line 
interface? Can you list the content of the lib-directory?

Regards,
  Pascal

 -Original Message-
 From: Anoj [mailto:anojatapa...@gmail.commailto:anojatapa...@gmail.com]
 Sent: Wednesday, May 14, 2014 6:54 PM
 To: 
 dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
 Subject: [Dspace-tech] Error in enabling media filter

 Hi,

 I am trying to enable thumbnail creation using Media Filter plugin for Dspace
 3.2.
 Got the following exception while executing the script.

 Here are the steps followed and changes in dspac.cfg file.

 - webui.browse.thumbnail.show = true

 - webui.item.thumbnail.show = true

 - webui.browse.thumbnail.linkbehaviour = item

 - webui.browse.thumbnail.maxheight = 40
 - webui.browse.thumbnail.maxwidth = 40

 After having changed to dspace.cfg,
 - Restart Tomcat Server,
 - run [dspace]/bin/dspace filter-media,

 Any help would be great.

 Thanks



 Throws the following exception-

  INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
 DSpaceKernel:org.dspace:name=fcbd715e-2d76-49d8-9956-
 da3829fe2b41,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:k
 ernel=null
  INFO [main] (ConfigurationManager.java:1224) - Loading from classloader:
 file:/klib/app/dspace/3.2-up/config/dspace.cfg
  INFO [main] (ConfigurationManager.java:1224) - Using dspace provided log
 configuration (log.init.config)  INFO [main] (ConfigurationManager.java:1224)
 - Loading:
 /klib/app/dspace/3.2-up/config/log4j.properties
 Exception in thread main java.lang.NoClassDefFoundError:
 org/springframework/core/io/ClassPathResource
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.readPropert
 yResource(DSpaceConfigurationService.java:550)
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.loadInitialCo
 nfig(DSpaceConfigurationService.java:344)
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.init(DSpac
 eConfigurationService.java:61)
 at
 org.dspace.servicemanager.DSpaceKernelImpl.start(DSpaceKernelImpl.java:
 145)
 at
 org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:51)
 Caused by: java.lang.ClassNotFoundException:
 org.springframework.core.io.ClassPathResource
 at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
 at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
 at java.security.AccessController.doPrivileged(Native Method)
 at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
 at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
 ... 5 more




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 View this message in context: http://dspace.2283337.n4.nabble.com/Error-
 in-enabling-media-filter-tp4673070.html
 Sent from the DSpace - Tech mailing list archive at Nabble.com.

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Re: [Dspace-tech] Error in enabling media filter

2014-05-16 Thread Becker, Pascal-Nicolas
Hi,

I don't think that the problem comes from changing the dspace.cfg. The 
exception message is that the class 
org.springframework.core.io.ClassPathResource couldn't be found. Probably some 
jars are missing? Can you execute other commands over the dspace command line 
interface? Can you list the content of the lib-directory?

Regards,
  Pascal

 -Original Message-
 From: Anoj [mailto:anojatapa...@gmail.com]
 Sent: Wednesday, May 14, 2014 6:54 PM
 To: dspace-tech@lists.sourceforge.net
 Subject: [Dspace-tech] Error in enabling media filter
 
 Hi,
 
 I am trying to enable thumbnail creation using Media Filter plugin for Dspace
 3.2.
 Got the following exception while executing the script.
 
 Here are the steps followed and changes in dspac.cfg file.
 
 - webui.browse.thumbnail.show = true
 
 - webui.item.thumbnail.show = true
 
 - webui.browse.thumbnail.linkbehaviour = item
 
 - webui.browse.thumbnail.maxheight = 40
 - webui.browse.thumbnail.maxwidth = 40
 
 After having changed to dspace.cfg,
 - Restart Tomcat Server,
 - run [dspace]/bin/dspace filter-media,
 
 Any help would be great.
 
 Thanks
 
 
 
 Throws the following exception-
 
  INFO [main] (DSpaceKernelInit.java:52) - Created new kernel:
 DSpaceKernel:org.dspace:name=fcbd715e-2d76-49d8-9956-
 da3829fe2b41,type=DSpaceKernel:lastLoad=null:loadTime=0:running=false:k
 ernel=null
  INFO [main] (ConfigurationManager.java:1224) - Loading from classloader:
 file:/klib/app/dspace/3.2-up/config/dspace.cfg
  INFO [main] (ConfigurationManager.java:1224) - Using dspace provided log
 configuration (log.init.config)  INFO [main] (ConfigurationManager.java:1224)
 - Loading:
 /klib/app/dspace/3.2-up/config/log4j.properties
 Exception in thread main java.lang.NoClassDefFoundError:
 org/springframework/core/io/ClassPathResource
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.readPropert
 yResource(DSpaceConfigurationService.java:550)
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.loadInitialCo
 nfig(DSpaceConfigurationService.java:344)
 at
 org.dspace.servicemanager.config.DSpaceConfigurationService.init(DSpac
 eConfigurationService.java:61)
 at
 org.dspace.servicemanager.DSpaceKernelImpl.start(DSpaceKernelImpl.java:
 145)
 at
 org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:51)
 Caused by: java.lang.ClassNotFoundException:
 org.springframework.core.io.ClassPathResource
 at java.net.URLClassLoader$1.run(URLClassLoader.java:366)
 at java.net.URLClassLoader$1.run(URLClassLoader.java:355)
 at java.security.AccessController.doPrivileged(Native Method)
 at java.net.URLClassLoader.findClass(URLClassLoader.java:354)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:425)
 at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:308)
 at java.lang.ClassLoader.loadClass(ClassLoader.java:358)
 ... 5 more
 
 
 
 
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 in-enabling-media-filter-tp4673070.html
 Sent from the DSpace - Tech mailing list archive at Nabble.com.
 
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Re: [Dspace-tech] Dspace 4.1 and Datacite

2014-05-16 Thread Becker, Pascal-Nicolas
Hi Heiki,

can you please describe the workflow your using? What do you mean when you 
write DOIs are represented as updated but not minted?

The normal procedure is the following: a DOI is marked to be 
reserved/registered/updated/… in the database. When you start the DOI-Organiser 
it looks into the Database what tasks are waiting. If necessary it send the 
metadata that belongs to the DOI to DataCite and then it sends the URL the DOI 
should refer.

A common problem happens when switching from the DataCite test server to the 
productive server. The path on the productive server are different than those 
on the test server. This has to be changed in the file 
[dspace]/config/spring/api/identifier-service.xml. This is described here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-IdentifierService.

Regards,
  Pascal

From: Heiki Epner [mailto:heiki.ep...@ut.ee]
Sent: Thursday, May 15, 2014 10:22 AM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Dspace 4.1 and Datacite


Dears



Dspace 4.1 (Ubuntu 14.04, openjdk7), configured for minting doi-s in datacite 
testserver.

During submission dois are generated, doi-organiser -l is giving a list of 
doi-s, quequed for update.

After updating dois are represented in datacite server as updated dois, but not 
minted.

Doi-organiser -l give a list dois, quequed for registering, but 
registering/minting is impossible, indication: DOI_ALREADY_EXISTS.

Is here a clever trick?

Something with update before registering?



Heiki Epner

Library of Tartu University

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Re: [Dspace-tech] Error message when updating index

2014-05-16 Thread Becker, Pascal-Nicolas
Hi Stephano,

have you tried to use index-discovery to rebuild the complete index (using 
[dspace-install]/bin/dspace index-discovery -b)?

Regards,
  Pascal

 -Original Message-
 From: Stephano John [mailto:mga...@suanet.ac.tz]
 Sent: Friday, May 16, 2014 7:50 AM
 To: dspace-tech@lists.sourceforge.net
 Subject: [Dspace-tech] Error message when updating index
 
 Dear all,
 
 We are running dspace 4.0, still not launched to be seen by the public but
 when we run [dspace]/bin . index-discovery we get the following error
 message, but previously it was working fine!!
 
 
 Exception: Error executing query
 org.dspace.discovery.SearchServiceException: Error executing query
   at
 org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:484)
   at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
   at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
   at
 sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.j
 ava:57)
   at
 sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
 sorImpl.java:43)
   at java.lang.reflect.Method.invoke(Method.java:606)
   at
 org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.ja
 va:225)
   at
 org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:77)
 Caused by: org.apache.solr.client.solrj.SolrServerException: Error executing
 query
   at
 org.apache.solr.client.solrj.request.QueryRequest.process(QueryRequest.ja
 va:98)
   at org.apache.solr.client.solrj.SolrServer.query(SolrServer.java:301)
   at
 org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:454)
   ... 7 more
 Caused by: java.lang.ClassCastException:
 org.apache.solr.common.util.SimpleOrderedMap cannot be cast to
 java.lang.String
   at
 org.apache.solr.common.util.JavaBinCodec.readOrderedMap(JavaBinCodec.j
 ava:120)
   at
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:184)
   at
 org.apache.solr.common.util.JavaBinCodec.readSolrDocument(JavaBinCodec
 .java:325)
   at
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:215)
   at
 org.apache.solr.common.util.JavaBinCodec.readArray(JavaBinCodec.java:451
 )
   at
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:182)
   at
 org.apache.solr.common.util.JavaBinCodec.readSolrDocumentList(JavaBinCo
 dec.java:343)
   at
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:217)
   at
 org.apache.solr.common.util.JavaBinCodec.readOrderedMap(JavaBinCodec.j
 ava:121)
   at
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:184)
   at
 org.apache.solr.common.util.JavaBinCodec.unmarshal(JavaBinCodec.java:11
 2)
   at
 org.apache.solr.client.solrj.impl.BinaryResponseParser.processResponse(Bin
 aryResponseParser.java:41)
   at
 org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:
 407)
   at
 org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:
 180)
   at
 org.apache.solr.client.solrj.request.QueryRequest.process(QueryRequest.ja
 va:90)
 
 
 
 
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Re: [Dspace-tech] Dspace 4.1 and Datacite

2014-05-16 Thread Becker, Pascal-Nicolas
Hi Heiki,

can you please run the following commands in the specified order and send me 
the output on the command line and what they logged in dspace.log?
… doi-organiser –l
… doi-organiser –u
… doi-organiser –s
… doi-organiser –r
… doi-orgainser –l

You can read more on the relevance of the order of the commands here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-%27cron%27jobforasynchronousreservation/registration

Regards,
  Pascal


From: Heiki Epner [mailto:heiki.ep...@ut.ee]
Sent: Friday, May 16, 2014 1:15 PM
To: Becker, Pascal-Nicolas
Cc: dspace-tech@lists.sourceforge.net
Subject: RE: [Dspace-tech] Dspace 4.1 and Datacite


Dears



So, I have submit (or import)  items, doi-organiser -l give a list DOIs, marked 
to be updated. Nothing to see in test.datacite.org.

After updating  DOis are marked to be registered in dspace and in 
test.datacite.org  represented as updated. Doi-organiser -r give now message 
doi_already_exists (in logs) and nothing happens.



Regards

Heiki

16-05-2014 13:08 kirjutas Becker, Pascal-Nicolas:
Hi Heiki,

can you please describe the workflow your using? What do you mean when you 
write DOIs are represented as updated but not minted?

The normal procedure is the following: a DOI is marked to be 
reserved/registered/updated/… in the database. When you start the DOI-Organiser 
it looks into the Database what tasks are waiting. If necessary it send the 
metadata that belongs to the DOI to DataCite and then it sends the URL the DOI 
should refer.

A common problem happens when switching from the DataCite test server to the 
productive server. The path on the productive server are different than those 
on the test server. This has to be changed in the file 
[dspace]/config/spring/api/identifier-service.xml. This is described here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-IdentifierService.

Regards,
  Pascal

From: Heiki Epner [mailto:heiki.ep...@ut.ee]
Sent: Thursday, May 15, 2014 10:22 AM
To: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Dspace 4.1 and Datacite


Dears



Dspace 4.1 (Ubuntu 14.04, openjdk7), configured for minting doi-s in datacite 
testserver.

During submission dois are generated, doi-organiser -l is giving a list of 
doi-s, quequed for update.

After updating dois are represented in datacite server as updated dois, but not 
minted.

Doi-organiser -l give a list dois, quequed for registering, but 
registering/minting is impossible, indication: DOI_ALREADY_EXISTS.

Is here a clever trick?

Something with update before registering?



Heiki Epner

Library of Tartu University




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Re: [Dspace-tech] Error message when updating index

2014-05-16 Thread Becker, Pascal-Nicolas
Hi Stephano,

you're welcome. Please write a mail to dspace-tech whether this helped or not. 
The -b option replaces the old index with a completely new one. Running 
index-discover without options updates and cleans the index. It is recommended 
to run index-discovery -o daily to optimize the index. You can find more 
information here: 
https://wiki.duraspace.org/display/DSDOC4x/Discovery#Discovery-DiscoverySolrIndexMaintenance

Regards,
  Pascal

 -Original Message-
 From: Stephano John [mailto:mga...@suanet.ac.tz]
 Sent: Friday, May 16, 2014 1:39 PM
 To: Becker, Pascal-Nicolas
 Subject: RE: [Dspace-tech] Error message when updating index
 
 Dear Pascal,
 
 Thank you for your immediately response, i always do [dspace-
 install]/bin/dspace index-discovery
 
 Then i will try [dspace-install]/bin/dspace index-discovery -b)
 
 Regards
 Stephano
 
 
  Hi Stephano,
 
  have you tried to use index-discovery to rebuild the complete index
  (using [dspace-install]/bin/dspace index-discovery -b)?
 
  Regards,
Pascal
 
  -Original Message-
  From: Stephano John [mailto:mga...@suanet.ac.tz]
  Sent: Friday, May 16, 2014 7:50 AM
  To: dspace-tech@lists.sourceforge.net
  Subject: [Dspace-tech] Error message when updating index
 
  Dear all,
 
  We are running dspace 4.0, still not launched to be seen by the
  public but when we run [dspace]/bin . index-discovery we get the
  following error message, but previously it was working fine!!
 
 
  Exception: Error executing query
  org.dspace.discovery.SearchServiceException: Error executing query
 at
 
 org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:484)
 at org.dspace.discovery.IndexClient.main(IndexClient.java:119)
 at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
 at
 
 sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.
  j
  ava:57)
 at
 
 sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAcces
  sorImpl.java:43)
 at java.lang.reflect.Method.invoke(Method.java:606)
 at
 
 org.dspace.app.launcher.ScriptLauncher.runOneCommand(ScriptLauncher.j
  a
  va:225)
 at
  org.dspace.app.launcher.ScriptLauncher.main(ScriptLauncher.java:77)
  Caused by: org.apache.solr.client.solrj.SolrServerException: Error
  executing query
 at
  org.apache.solr.client.solrj.request.QueryRequest.process(QueryReques
  t.ja
  va:98)
 at org.apache.solr.client.solrj.SolrServer.query(SolrServer.java:301)
 at
 
 org.dspace.discovery.SolrServiceImpl.cleanIndex(SolrServiceImpl.java:454)
 ... 7 more
  Caused by: java.lang.ClassCastException:
  org.apache.solr.common.util.SimpleOrderedMap cannot be cast to
  java.lang.String
 at
 
 org.apache.solr.common.util.JavaBinCodec.readOrderedMap(JavaBinCodec.
  j
  ava:120)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:184)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readSolrDocument(JavaBinCode
  c
  .java:325)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:215)
 at
  org.apache.solr.common.util.JavaBinCodec.readArray(JavaBinCodec.java:
  451
  )
 at
 
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:182)
 at
  org.apache.solr.common.util.JavaBinCodec.readSolrDocumentList(JavaBin
  Co
  dec.java:343)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:217)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readOrderedMap(JavaBinCodec.
  j
  ava:121)
 at
 
 org.apache.solr.common.util.JavaBinCodec.readVal(JavaBinCodec.java:184)
 at
  org.apache.solr.common.util.JavaBinCodec.unmarshal(JavaBinCodec.java:
  11
  2)
 at
  org.apache.solr.client.solrj.impl.BinaryResponseParser.processRespons
  e(Bin
  aryResponseParser.java:41)
 at
 
 org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:
  407)
 at
 
 org.apache.solr.client.solrj.impl.HttpSolrServer.request(HttpSolrServer.java:
  180)
 at
  org.apache.solr.client.solrj.request.QueryRequest.process(QueryReques
  t.ja
  va:90)
 
 
 
 
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Re: [Dspace-tech] Select epeople buttons not working

2014-05-08 Thread Becker, Pascal-Nicolas
Hi,

are you using JSPUI or XMLUI? Which browser are you using?

Regards,
  Pascal

 -Original Message-
 From: Gary Browne [mailto:gary.bro...@sydney.edu.au]
 Sent: Thursday, May 08, 2014 4:48 AM
 To: dspace-tech Tech
 Subject: [Dspace-tech] Select epeople buttons not working
 
 Hi all,
 
 I've just setup an instance of DSpace 4.1 to look at. My system is:
 
 Tomcat 7
 RHEL 6.5 (64-bit)
 Ant 1.8.2
 Maven 3.2.1
 Java - OpenJDK 1.7.0_55
 
 I have setup just one account, myself, using the create-administrator
 command line tool. Now when I try to add a submitter or administrator to a
 collection, the Select ePeople button does nothing.
 
 Any ideas?
 
 Thanks,
 Gary
 
 
 GARY BROWNE | Development Programmer
 Library IT Services | Fisher Library F03
 
 THE UNIVERSITY OF SYDNEY
 
 T +61 2 9351 5946  | M +61 405 647 868 E gary.bro...@sydney.edu.au  | W
 http://sydney.edu.au Sent from my plain old desktop computer.
 
 CRICOS 00026A
 This email plus any attachments to it are confidential. Any unauthorised use
 is strictly prohibited. If you receive this email in error, please delete it 
 and any
 attachments.
 Please think of our environment and only print this e-mail if necessary.
 
 
 
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Re: [Dspace-tech] problem DOI

2014-04-16 Thread Becker, Pascal-Nicolas
Hi Gaetano,

let me come back on your mail from 9th of April. Did you solved your problem 
already?

The error just tells us that the Crosswalk with the name DataCite is missing. 
This crosswalk should be defined in config/dspace.cfg, as it is in the version 
that gets delivered with DSpace 4.1 (you can find the dspace.cfg in the version 
of DSpace 4.1 here: [1], please pay attention that this file gets changed 
during the installation process, so don't copy it in your dspace install 
directory!). Please take a look in your dspace.cfg. Is the crosswalk configured 
like in the linked example? Does the file configured under the property 
crosswalk.dissemination.DataCite.stylesheet exist?

Regards,
  Pascal

[1] 
https://github.com/DSpace/DSpace/blob/dspace-4.1/dspace/config/dspace.cfg#L508-L515
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Re: [Dspace-tech] DOI DATACITE

2014-02-11 Thread Becker, Pascal-Nicolas
Hi Massimiliano,

thank for pointing out a problem in our documentation to me (I'll fix it this 
afternoon).

I just noticed that DataCites production and test server use different paths. 
You have to change the [dspace]/config/spring/api/identifier-service.xml again. 
In this file you'll find two properties named DATACITE_DOI_PATH and 
DATACITE_METADATA_PATH. The default values are /mds/doi/ and /mds/metadata/ You 
have to set them to /doi/ and /metadata/ (remove the leading /mds).

Please tell me if this helped!
Regards,
  Pascal

 -Original Message-
 From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
 Sent: Tuesday, February 11, 2014 11:01 AM
 To: Becker, Pascal-Nicolas
 Cc: 'dspace-tech'; heli...@centrum.sk
 Subject: R: [Dspace-tech] DOI DATACITE
 
 Hi Pascal,
 
I have repaired the old DOI in the Database but as we have the test
 server in the intranet we thought that wasn't accessible for datacite server.
 So we have upgraded our production server and we are trying to active the
 DOI function.
 We have the right credentials for mds.datacite.org but we haven't the access
 to test.datacite.org.
 I have seen the dspace.cfg  in your link and I saw that there wasn't the
 crosswalk for DATACITE, so I have added it.
 Now we get this error:
 
 
 2014-02-11 10:44:44,906 INFO
 org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
 ,results=(0,0,3)
 2014-02-11 10:44:45,011 INFO
 org.dspace.app.webui.discovery.DiscoverUtility @ facets for scope,
 org.dspace.content.Community@28f: 3
 2014-02-11 10:44:45,431 INFO
 org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
 ,results=(0,0,3)
 2014-02-11 10:44:45,557 INFO
 org.dspace.app.webui.discovery.DiscoverUtility @ facets for scope,
 org.dspace.content.Community@28f: 3
 2014-02-11 10:44:45,870 INFO
 org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
 ,results=(0,0,3)
 2014-02-11 10:44:46,005 WARN  org.dspace.identifier.doi.DataCiteConnector
 @ While reserving the DOI doi:10.14273/unisa-4, we got a http status code
 404 and the message ?xml version=1.0 encoding=UTF-8? !DOCTYPE
 HTML SYSTEM about:legacy-compat htmlheadmeta
 content=text/html; charset=UTF-8 http-equiv=Content-Type/meta
 content=IE=8 http-equiv=X-UA-Compatible/link
 href=/resources/dijit/themes/tundra/tundra.css;jsessionid=6F8AA3B9DFDF
 8CA4082A98A39D1312AA type=text/css rel=stylesheet/linklink
 href=/resources/styles/standard.css;jsessionid=6F8AA3B9DFDF8CA4082A98
 A39D1312AA media=screen type=text/css rel=stylesheet/linklink
 href=/resources/dojox/highlight/resources/pygments/emacs.css;jsessionid
 =6F8AA3B9DFDF8CA4082A98A39D1312AA rel=stylesheet/linklink
 href=/resources/images/favicon.ico;jsessionid=6F8AA3B9DFDF8CA4082A98
 A39D1312AA rel=SHORTCUT ICON/script type=text/javascriptvar
 djConfig=en_US; /scriptscript type=text/javascript
 src=/resources/dojo/dojo.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D13
 12AA/scriptscript type=text/javascript
 src=/resources/spring/Spring.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D
 1312AA/scriptscript type=text/javascript
 src=/resources/spring/Spring-
 Dojo.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AA/scriptscrip
 t type=text/javascript src=/resources/js/jquery-
 1.5.1.min.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AA/script
 script type=text/javascript
 language=JavaScriptdojo.require(dojo.parser);/scripttitleWelcome
 to DataCite Metadata Store/title/headbody class=tundra
 springdiv id=wrapperdiv version=2.0 id=headerdiv
 id=titlea title=Home name=Home
 href=/;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AAimg
 src=/resources/images/dc-
 logo.gif;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AA/
 Metadata Store
 /a/divdiv id=topmenuYou are not logged in | spana
 href=/login;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AALogin/a
 /span/divbr style=clear:both//divdiv id=maindiv
 version=2.0script
 type=text/javascriptdojo.require('dijit.TitlePane');/scriptdiv
 id=_title_title_idscript
 type=text/javascriptSpring.addDecoration(new
 Spring.ElementDecoration({elementId : '_title_title_id', widgetType :
 'dijit.TitlePane', widgetAttrs : {title: 'Requested Resource Not Found', open:
 true}})); /scripth2Requested Resource Not Found/h2pSorry, we
 did not find the resource you were looking for./p/div/divdiv
 version=2.0 id=footerspana
 href=/;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AAHome/a/s
 pan | span id=languageLanguage: a title=Switch language to English
 href=?lang=enimg alt=Switch language to English
 src=/resources/images/flags/en.png;jsessionid=6F8AA3B9DFDF8CA4082A98
 A39D1312AA class=flag//a a title=Switch

Re: [Dspace-tech] DOI DATACITE

2014-02-11 Thread Becker, Pascal-Nicolas
Hi,

I'm glad, that it works now. :-)
Currently it is not possible to choose which items or which collections use 
DOIs and which don't. If you want DSpace to automatically mint DOIs it 
currently does it for every published item.

Regards,
  Pascal

 -Original Message-
 From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
 Sent: Tuesday, February 11, 2014 12:45 PM
 To: Becker, Pascal-Nicolas
 Cc: 'dspace-tech'
 Subject: R: [Dspace-tech] DOI DATACITE
 
 Dear Pascal,
It's a pleasure for me if I helped you to improve the documentation.
 I have changed identifier-service.xml and now It seems that work.
 But I wonder if it is possible to choose a collection where we don't want to
 mint a DOI.
 Thanks
 Best regards
 Massimiliano
 
 
 -Messaggio originale-
 Da: Becker, Pascal-Nicolas [mailto:p.bec...@tu-berlin.de]
 Inviato: martedì 11 febbraio 2014 11:58
 A: Massimiliano Cilurzo
 Cc: 'dspace-tech'
 Oggetto: RE: [Dspace-tech] DOI DATACITE
 
 Hi Massimiliano,
 
 thank for pointing out a problem in our documentation to me (I'll fix it this
 afternoon).
 
 I just noticed that DataCites production and test server use different paths.
 You have to change the [dspace]/config/spring/api/identifier-service.xml
 again. In this file you'll find two properties named DATACITE_DOI_PATH and
 DATACITE_METADATA_PATH. The default values are /mds/doi/ and
 /mds/metadata/ You have to set them to /doi/ and /metadata/ (remove the
 leading /mds).
 
 Please tell me if this helped!
 Regards,
   Pascal
 
  -Original Message-
  From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
  Sent: Tuesday, February 11, 2014 11:01 AM
  To: Becker, Pascal-Nicolas
  Cc: 'dspace-tech'; heli...@centrum.sk
  Subject: R: [Dspace-tech] DOI DATACITE
 
  Hi Pascal,
 
 I have repaired the old DOI in the Database but as we have the
  test server in the intranet we thought that wasn't accessible for datacite
 server.
  So we have upgraded our production server and we are trying to active
  the DOI function.
  We have the right credentials for mds.datacite.org but we haven't the
  access to test.datacite.org.
  I have seen the dspace.cfg  in your link and I saw that there wasn't
  the crosswalk for DATACITE, so I have added it.
  Now we get this error:
 
 
  2014-02-11 10:44:44,906 INFO
  org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
  ,results=(0,0,3)
  2014-02-11 10:44:45,011 INFO
  org.dspace.app.webui.discovery.DiscoverUtility @ facets for scope,
  org.dspace.content.Community@28f: 3
  2014-02-11 10:44:45,431 INFO
  org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
  ,results=(0,0,3)
  2014-02-11 10:44:45,557 INFO
  org.dspace.app.webui.discovery.DiscoverUtility @ facets for scope,
  org.dspace.content.Community@28f: 3
  2014-02-11 10:44:45,870 INFO
  org.dspace.app.webui.discovery.DiscoverySearchRequestProcessor @
 
 anonymous:session_id=9B2B628802FEB226D0D9BC9FEDC2786F:ip_addr=159.
 
 149.133.227:search:scope=org.dspace.content.Community@28f,query=null
  ,results=(0,0,3)
  2014-02-11 10:44:46,005 WARN
  org.dspace.identifier.doi.DataCiteConnector
  @ While reserving the DOI doi:10.14273/unisa-4, we got a http status
  code
  404 and the message ?xml version=1.0 encoding=UTF-8?
 !DOCTYPE
  HTML SYSTEM about:legacy-compat htmlheadmeta
  content=text/html; charset=UTF-8 http-equiv=Content-Type/meta
  content=IE=8 http-equiv=X-UA-Compatible/link
 
 href=/resources/dijit/themes/tundra/tundra.css;jsessionid=6F8AA3B9DFD
  F 8CA4082A98A39D1312AA type=text/css rel=stylesheet/linklink
 
 href=/resources/styles/standard.css;jsessionid=6F8AA3B9DFDF8CA4082A98
  A39D1312AA media=screen type=text/css
  rel=stylesheet/linklink
  href=/resources/dojox/highlight/resources/pygments/emacs.css;jsession
  id =6F8AA3B9DFDF8CA4082A98A39D1312AA rel=stylesheet/linklink
 
 href=/resources/images/favicon.ico;jsessionid=6F8AA3B9DFDF8CA4082A98
  A39D1312AA rel=SHORTCUT ICON/script type=text/javascriptvar
  djConfig=en_US; /scriptscript type=text/javascript
 
 src=/resources/dojo/dojo.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D13
  12AA/scriptscript type=text/javascript
 
 src=/resources/spring/Spring.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D
  1312AA/scriptscript type=text/javascript
  src=/resources/spring/Spring-
 
 Dojo.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AA/scriptscrip
  t type=text/javascript src=/resources/js/jquery-
 
 1.5.1.min.js;jsessionid=6F8AA3B9DFDF8CA4082A98A39D1312AA/script
  script type=text/javascript
  language=JavaScriptdojo.require(dojo.parser);/scripttitleWelc
  ome to DataCite Metadata Store/title/headbody class=tundra
  springdiv id=wrapperdiv version=2.0 id=headerdiv
  id=titlea title=Home name=Home
  href

Re: [Dspace-tech] DOI DATACITE

2014-02-10 Thread Becker, Pascal-Nicolas
Sorry, I lost track. What's the current problem right now? Did you repair the 
old DOIs in your database?

The URL test.datacite.org addresses the test server of DataCite, the URL 
mds.datacite.org addresses the production server. You can get a login to the 
test server from your DOI/DataCite registration agency. We got two different 
prefixes for the test and for the production server, so you should check for 
which server you have valid credentials (prefix, username, password). You can 
test your credential by calling https://test.datacite.org/mds/ or 
https://mds.datacite.org in your browser and try to login. 
AUTHENTICATION_ERROR means that your credentials are invalid or does not 
match the doi prefix you configured. There should be a more detailed message in 
the dspace.log, can you please have a look?

Relating the crosswalk problem it is absolutely correct, what helix wrote. Is 
the file named in your dspace.cfg? You can see how it is done here: 
https://github.com/DSpace/DSpace/blob/dspace-4.0/dspace/config/dspace.cfg#L508-L515.
 The problem with the DataCite crosswork does not have anything to do with the 
URL of the DataCite server, it's the same crosswalk for testing and production 
server.

I would advise to use the command line argument -q when the doi-organiser gets 
started by a cronjob only. If you use the doi-organiser manually you get more 
information if you don't use -q.

Regards,
  Pascal

 -Original Message-
 From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
 Sent: Monday, February 10, 2014 3:34 PM
 To: heli...@centrum.sk
 Cc: Becker, Pascal-Nicolas; 'dspace-tech'
 Subject: R: [Dspace-tech] R: DOI DATACITE
 
 Dear Ivan,
 
The DIM2DataCite.xsl is present in the dspace/config/crosswalks directory.
 I have just noticed that if I put in the identifier-service.xml, 
 'DATACITE_HOST'
 value ='test.datacite.org', I haven't this problem.
 
   bean id=org.dspace.identifier.doi.DOIConnector
 class=org.dspace.identifier.doi.DataCiteConnector
 scope=singleton
 property name='DATACITE_SCHEME' value='https'/
 property name='DATACITE_HOST' value='mds.datacite.org'/
 property name='DATACITE_DOI_PATH' value='/mds/doi/' /
 property name='DATACITE_METADATA_PATH' value='/mds/metad 
 
 If I run dspace/bin/dspace doi-organiser -u -q with test.datacite.org the
 system doesn't give me the previous error but send an email with this
 message:
 Update DOI doi:10.14273/unisa-2 for ITEM with ID 1.210 failed:
 AUTHENTICATION_ERROR
 
 Thanks
 Best regards
 Massimiliano
 
 -Messaggio originale-
 Da: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] Per conto di
 helix84
 Inviato: lunedì 10 febbraio 2014 15:23
 A: Massimiliano Cilurzo
 Cc: Becker, Pascal-Nicolas; dspace-tech
 Oggetto: Re: [Dspace-tech] R: DOI DATACITE
 
 Before Pascal gives you an authoritative reply, I'd check whether you have
 the [dspace]/config/crosswalks/DIM2DataCite.xsl file present.
 Perhaps you reused your old configuration directory from DSpace 3.x that
 didn't have this file?
 
 
 Regards,
 ~~helix84
 
 Compulsory reading: DSpace Mailing List Etiquette
 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette

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Re: [Dspace-tech] DOI DATACITE

2014-01-24 Thread Becker, Pascal-Nicolas
Hi Massimiliano,

you should configure your E-Mail settings. DSpace wanted to send a mail to the 
address configured in alert.recipient, but this field was empty (you can find 
more information here: 
https://wiki.duraspace.org/display/DSDOC4x/Configuration+Reference#ConfigurationReference-DSpaceEmailSettings).

I see two problems with your DOI-Configuration in the log. The first is, that 
the DOIs have strange names (doi:10.,10.5072/unisa-1), the second is that 
the request seems to be send to the wrong address.

Which values have you set in [dspace]/config/dspace.cfg for 
doi.identifier.prefix and doi.identifier.namespaceseparator? Please DO NOT send 
the complete dspace.cfg as it may contain different username/password 
combinations (e.g. for your database connection, for your doi-namespaces and so 
on). By the way: did you set identifier.doi.user and identifier.doi.password 
correctly (again: please DO NOT send the values you put in there).

In [dspace]/config/spring/api/identifier-service.xml you added a bean with the 
id org.dspace.identifier.doi.DOIConnector (you added it by removing comments). 
In the configuration of the bean you can set the host and paths the 
DOIConnector should connect to. Can you please send me those lines? The 
important part begins with bean id=org.dspace.identifier.doi.DOIConnector 
and ends with /bean (in my file these are the lines 56 to 64, but it may 
differ).

Regards,
  Pascal

From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Friday, January 24, 2014 9:58 AM
To: Becker, Pascal-Nicolas; dspace-tech@lists.sourceforge.net
Subject: R: [Dspace-tech] DOI DATACITE

Hi Pascal,
in this is the dspace.log after  the command dspace/bin/dspace doi-organiser -u
...

org.dspace.content.MetadataSchema @ Loading schema cache for fast finds
2014-01-24 09:53:40,896 WARN  org.dspace.identifier.doi.DataCiteConnector @ 
While reserving the DOI doi:10.,10.5072/unisa-1, we got a http status code 
404 and the message ?xml version=1.0 encoding=UTF-8?
htmlheadmeta content=text/html; charset=UTF-8 
http-equiv=Content-Type/meta content=IE=8 
http-equiv=X-UA-Compatible/link 
href=/resources/dijit/themes/tundra/tundra.css;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 type=text/css rel=stylesheet/linklink 
href=/resources/styles/standard.css;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 media=screen type=text/css rel=stylesheet/linklink 
href=/resources/dojox/highlight/resources/pygments/emacs.css;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 rel=stylesheet/linklink 
href=/resources/images/favicon.ico;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 rel=SHORTCUT ICON/script type=text/javascriptvar djConfig=en_US; 
/scriptscript type=text/javascript 
src=/resources/dojo/dojo.js;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2/scriptscript
 type=text/javascript 
src=/resources/spring/Spring.js;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2/scriptscript
 type=text/javascript 
src=/resources/spring/Spring-Dojo.js;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2/scriptscript
 type=text/javascript 
src=/resources/js/jquery-1.5.1.min.js;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2/scriptscript
 type=text/javascript 
language=JavaScriptdojo.require(dojo.parser);/scripttitleWelcome to 
DataCite Metadata Store/title/headbody class=tundra springdiv 
id=wrapperdiv version=2.0 id=headerdiv id=titlea title=Home 
name=Home href=/;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2img 
src=/resources/images/dc-logo.gif;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2/
Metadata Store
/a/divdiv id=topmenuYou are not logged in | spana 
href=/login;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2Login/a/span/divbr
 style=clear:both//divdiv id=maindiv version=2.0script 
type=text/javascriptdojo.require('dijit.TitlePane');/scriptdiv 
id=_title_title_idscript type=text/javascriptSpring.addDecoration(new 
Spring.ElementDecoration({elementId : '_title_title_id', widgetType : 
'dijit.TitlePane', widgetAttrs : {title: 'Requested Resource Not Found', open: 
true}})); /scripth2Requested Resource Not Found/h2pSorry, we did not 
find the resource you were looking for./p/div/divdiv version=2.0 
id=footerspana 
href=/;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2Home/a/span | span 
id=languageLanguage: a title=Switch language to English 
href=?lang=enimg alt=Switch language to English 
src=/resources/images/flags/en.png;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 class=flag//a a title=Switch language to Deutsch href=?lang=deimg 
alt=Switch language to Deutsch 
src=/resources/images/flags/de.png;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 class=flag//a a title=Switch language to French href=?lang=frimg 
alt=Switch language to French 
src=/resources/images/flags/fr.png;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2
 class=flag//a /span | spana 
href=/login;jsessionid=8EC5E96E127CC2CD35C2A70011CCE3B2Login/a/span/div/div/div/body/html.
2014-01-24 09:53:40,920 WARN  org.dspace.identifier.doi.DOIOrganiser @ Unable 
to send email alert

Re: [Dspace-tech] DOI DATACITE

2014-01-23 Thread Becker, Pascal-Nicolas
Hi Massimiliano,

as written in the DSpace Documentation DSpace uses an asynchronous approach to 
register DOIs. Whenever DSpace wants to reserver/register a DOI, it just writes 
in the DOI table what should be done. The doi-organiser does the real work (by 
sending one or multiple requests to datacite, containing the metadata and the 
information if a doi should be reserved, registered, ...). So to send your 
registration request to DataCite, you have to run the doi-organiser as 
described here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-%27cron%27jobforasynchronousreservation/registration
To test it, you can start these commands manually on the command line. For 
regular use I would suggest a cronjob.

It's up to you to decide how often the doi-organiser should be triggered by the 
cronjob. The decision you have to make is how much time is acceptable for you 
between the moment DSpace adds a DOI to the metadata of an item and the moment 
the DOI is functional (registered). I would make this decision depending on the 
number of submissions you have per day. On smaller repositories it should be 
acceptable to run the doi-organsier perhaps twice a doi. But if you want to, 
you can run it more often, f.e. every 15 minutes...

The reason we did it this way, is to ensure that DSpace is still working even 
if DataCite should have some down time...

Did this helps you? What happens if you run [dspace]/bin/dspace doi-organiser 
-u?

Regards,
  Pascal


From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Thursday, January 23, 2014 8:46 AM
To: dspace-tech@lists.sourceforge.net; Becker, Pascal-Nicolas
Subject: R: [Dspace-tech] DOI DATACITE

Hi Pascal,
  I have executed dspace doi-organiser in the wrong directory.
When I execute bin/dspace doi-organiser -l?
The system answer is:

There are no DOIs queued for reservation.

There are no DOIs queued for registration.

DOIs queued for update:
doi:10.,10.5072/unisa-1 (belongs to item with handle 123456789/479)
doi:10.x,10.5072/un-2 (belongs to item with handle 123456789/480)
doi:10.x,10.5072/unisa-3 (belongs to item with handle 123456789/481)
doi:10.,10.5072/unisa-4 (belongs to item with handle 123456789/482)
doi: 10.5072/unisa-5 (belongs to item with handle 123456789/485)
doi: 10.5072/unisa-6 (belongs to item with handle 123456789/486)

There are no DOIs queued for deletion.
When I go in the Datacite site, I can't see any of this item.
Thanks
Kind regards
Massimiliano



Da: Becker, Pascal-Nicolas [mailto:p.bec...@tu-berlin.de]
Inviato: venerdì 17 gennaio 2014 16:56
A: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Cc: Massimiliano Cilurzo
Oggetto: RE: [Dspace-tech] DOI DATACITE

Hi Massimiliano,

did you entered into a contract with a DOI registration agency? Did they 
provide you a username, a password and a (test-)prefix? Are you sure, they want 
you to use the DataCite API directly?

If you followed the instructions in the documentation, DSpace should mint DOIs 
whenever new items gets published into the repository. With publish I mean 
that the item is part of your repository, can be found using the normal search, 
and is not waiting for the user to finish the submission or for an 
administrator to accept it. The DOI is stored as metadata value of the item in 
the field dc.identifier.uri. So If you take a look on the published item you 
should find it there. As the documentation describes DSpace uses an 
asynchronous mechanism to register DOIs. Using the command line interface 
(https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-CommandLineInterface)
 you can list all DOIs waiting for reservation and/or registration. So, do you 
already have published an item after you configured DSpace to use DOIs? What 
happens if you executes [dspace-install]/bin/dspace doi-organiser -l?

Regards,
  Pascal


From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Friday, January 17, 2014 12:25 PM
To: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] DOI DATACITE

Hi All,

 We have installed in a test server DSPACE 4.0, we have configured it for 
the use of DOI from DATACITE.
We followed the guide line at 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier
But now I wonder how we can test if.
Could someone give an help?
Thanks
Best regards
Massimiliano Cilurzo
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Re: [Dspace-tech] DOI DATACITE

2014-01-23 Thread Becker, Pascal-Nicolas
Hi Massimiliano,

you're on the right way, but there is still some error. What does the 
doi-organiser writes into [dpsace]/logs/dspace.logs?

Regards,
  Pascal

From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Thursday, January 23, 2014 1:09 PM
To: Becker, Pascal-Nicolas; dspace-tech@lists.sourceforge.net
Subject: R: [Dspace-tech] DOI DATACITE

Hi Pascal,
Thanks for your help now I'm understanding how it works.
When I execute [dspace]/bin/dspace doi-organiser -u the answer is this:
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx,10.5072/unisa-1
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx,10.5072/unisa-2
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx,10.5072/unisa-3
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx,10.5072/unisa-4
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx/unisa-5
Unable to send email alert.
It wasn't possible to update this identifier: doi:10.142xx/unisa-6

Da: Becker, Pascal-Nicolas [mailto:p.bec...@tu-berlin.de]
Inviato: giovedì 23 gennaio 2014 13:00
A: dspace-tech@lists.sourceforge.net
Cc: Massimiliano Cilurzo
Oggetto: RE: [Dspace-tech] DOI DATACITE

Hi Massimiliano,

as written in the DSpace Documentation DSpace uses an asynchronous approach to 
register DOIs. Whenever DSpace wants to reserver/register a DOI, it just writes 
in the DOI table what should be done. The doi-organiser does the real work (by 
sending one or multiple requests to datacite, containing the metadata and the 
information if a doi should be reserved, registered, ...). So to send your 
registration request to DataCite, you have to run the doi-organiser as 
described here: 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-%27cron%27jobforasynchronousreservation/registration
To test it, you can start these commands manually on the command line. For 
regular use I would suggest a cronjob.

It's up to you to decide how often the doi-organiser should be triggered by the 
cronjob. The decision you have to make is how much time is acceptable for you 
between the moment DSpace adds a DOI to the metadata of an item and the moment 
the DOI is functional (registered). I would make this decision depending on the 
number of submissions you have per day. On smaller repositories it should be 
acceptable to run the doi-organsier perhaps twice a doi. But if you want to, 
you can run it more often, f.e. every 15 minutes...

The reason we did it this way, is to ensure that DSpace is still working even 
if DataCite should have some down time...

Did this helps you? What happens if you run [dspace]/bin/dspace doi-organiser 
-u?

Regards,
  Pascal


From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Thursday, January 23, 2014 8:46 AM
To: 
dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net; 
Becker, Pascal-Nicolas
Subject: R: [Dspace-tech] DOI DATACITE

Hi Pascal,
  I have executed dspace doi-organiser in the wrong directory.
When I execute bin/dspace doi-organiser -l?
The system answer is:

There are no DOIs queued for reservation.

There are no DOIs queued for registration.

DOIs queued for update:
doi:10.,10.5072/unisa-1 (belongs to item with handle 123456789/479)
doi:10.x,10.5072/un-2 (belongs to item with handle 123456789/480)
doi:10.x,10.5072/unisa-3 (belongs to item with handle 123456789/481)
doi:10.,10.5072/unisa-4 (belongs to item with handle 123456789/482)
doi: 10.5072/unisa-5 (belongs to item with handle 123456789/485)
doi: 10.5072/unisa-6 (belongs to item with handle 123456789/486)

There are no DOIs queued for deletion.
When I go in the Datacite site, I can't see any of this item.
Thanks
Kind regards
Massimiliano



Da: Becker, Pascal-Nicolas [mailto:p.bec...@tu-berlin.de]
Inviato: venerdì 17 gennaio 2014 16:56
A: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Cc: Massimiliano Cilurzo
Oggetto: RE: [Dspace-tech] DOI DATACITE

Hi Massimiliano,

did you entered into a contract with a DOI registration agency? Did they 
provide you a username, a password and a (test-)prefix? Are you sure, they want 
you to use the DataCite API directly?

If you followed the instructions in the documentation, DSpace should mint DOIs 
whenever new items gets published into the repository. With publish I mean 
that the item is part of your repository, can be found using the normal search, 
and is not waiting for the user to finish the submission or for an 
administrator to accept it. The DOI is stored as metadata value of the item in 
the field dc.identifier.uri. So If you take a look on the published item you 
should find it there. As the documentation describes DSpace uses an 
asynchronous mechanism to register DOIs. Using the command line interface 
(https://wiki.duraspace.org/display

Re: [Dspace-tech] DOI DATACITE

2014-01-17 Thread Becker, Pascal-Nicolas
Hi Massimiliano,

did you entered into a contract with a DOI registration agency? Did they 
provide you a username, a password and a (test-)prefix? Are you sure, they want 
you to use the DataCite API directly?

If you followed the instructions in the documentation, DSpace should mint DOIs 
whenever new items gets published into the repository. With publish I mean 
that the item is part of your repository, can be found using the normal search, 
and is not waiting for the user to finish the submission or for an 
administrator to accept it. The DOI is stored as metadata value of the item in 
the field dc.identifier.uri. So If you take a look on the published item you 
should find it there. As the documentation describes DSpace uses an 
asynchronous mechanism to register DOIs. Using the command line interface 
(https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier#DOIDigitalObjectIdentifier-CommandLineInterface)
 you can list all DOIs waiting for reservation and/or registration. So, do you 
already have published an item after you configured DSpace to use DOIs? What 
happens if you executes [dspace-install]/bin/dspace doi-organiser -l?

Regards,
  Pascal


From: Massimiliano Cilurzo [mailto:mcilu...@unisa.it]
Sent: Friday, January 17, 2014 12:25 PM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] DOI DATACITE

Hi All,

 We have installed in a test server DSPACE 4.0, we have configured it for 
the use of DOI from DATACITE.
We followed the guide line at 
https://wiki.duraspace.org/display/DSDOC4x/DOI+Digital+Object+Identifier
But now I wonder how we can test if.
Could someone give an help?
Thanks
Best regards
Massimiliano Cilurzo
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Re: [Dspace-tech] DSpace 3.1 on ubuntu 10.4

2013-08-15 Thread Becker, Pascal-Nicolas
I have no tested it myself, but from the required software it should work if 
you install the packages ant1.8, maven2 (included in universe repository, which 
is not supported by canonical), tomcat6 and postgresql (either 8.3 or better 
8.4).

If you have also installed the package ant (which contains version 1.7) you 
may have to use update-alternatives to ensure that version 1.8 will be used.

Regards,
  Pascal

Von: remi asare [mailto:remi.as...@gmail.com]
Gesendet: Donnerstag, 15. August 2013 17:27
An: dspace-tech
Betreff: [Dspace-tech] DSpace 3.1 on ubuntu 10.4

Hello,
I have a quick answer! Will it be safe to install DSpace 3.1 on Ubuntu 10.4?
Thanks in advance
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Re: [Dspace-tech] Separating application and database server?

2013-06-05 Thread Becker, Pascal-Nicolas
We currently do the same. I set up a DSpace instance for testing and 
development, where DSpace and Postgresql runs on the same server. The 
productive instance should be setup in the central it services center of the 
institution I'm working for. For performance and security reasons they want to 
separate as much services as possible on different virtual servers. Doing so, 
the servlet container, the database and even the Apache in front of the servlet 
container run each on an own virtual server.

Regards from Berlin,
  Pascal

From: Michael White [mailto:michael.wh...@stir.ac.uk]
Sent: Wednesday, June 05, 2013 11:01 AM
To: dspace-tech@lists.sourceforge.net
Subject: [Dspace-tech] Separating application and database server?

Hi,

We are currently running DSpace v1.6.2 (JSPUI) with c6300 records, all full 
text items, and the repository is still growing steadily  . . .

I’m currently planning a migration to v3.1 – until now we’ve been running 
DSpace “within the library”, but, as DSpace is now much more of a core system 
at the institution, I’ve brought our institutional DBAs on board in order to 
start “mainstreaming” support for DSpace here . . .

The first question that I’ve been asked is “should we be putting DSpace and 
Postgres on separate application and database (virtual) servers”?

I’ve had a look through the Wiki, but couldn’t see any specific mention of 
running separate application and database servers.

My gut feeling is that this is not a massive system and that separate servers 
is probably overkill in this instance (and “it ain’t broke so I’m not sure it 
needs fixing”) – but I’m not a “proper DBA” so my gut feeling probably isn’t 
enough . . . ;-)

I’ve also heard rumours of performance issues when running postgres on a 
separate virtual server (in general, not specifically related to DSpace) . . . 
. ?

So, I was just wondering what other folk do? Do you run separate servers? If 
yes, why? If no, why not (and what size of repositories are folk running on a 
single bit of kit)?

Obviously if we go with a single (virtual) server, we would ensure that, at the 
very least, it meets the recommended DSpace Production system requirements.

I’m meeting with our DBAs tomorrow to discuss all this, so any information folk 
can provide in relation to running on a single server or separate application 
and database servers would be helpful.

Many thanks as ever,

Mike
Michael White
eLearning Liaison and Development (eLD)
Information Services
S8, Library
University of Stirling
Stirling SCOTLAND
FK9 4LA
Email: michael.wh...@stir.ac.ukmailto:michael.wh...@stir.ac.uk
Tel: +44 (0) 1786 466877
Fax: +44 (0) 1786 466880
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Re: [Dspace-tech] Dspace and DOI through DataCite

2013-05-13 Thread Becker, Pascal-Nicolas
Hi Joseph,

DataCite does not register DOIs directly. Instead DataCite members act as DOI 
registries. Some DataCite members provides their own APIs, some want you to use 
the DataCite API directly. I developed some code to mint and register DOIs with 
DSpace, and I hope it will become part of DSpace 4. If you may use the DataCite 
API directly you can use my code, which can be found on github [1]. If you’ll 
have to use the API of the DataCite member acting as your DOI registration 
agency, you’ll probably have to extend my code (I can give you more information 
if necessary). My code is not completely finished: it works but there are 
several questions that need to be discussed before it gets part of an official 
DSpace release. To discuss these I opened a ticket [2] in Jira and wrote a 
little article in Confluence [3]. I would be glad if you would add your ideas 
and impression of the code in Jira.

Regards,
  Pascal

[1] https://github.com/tuub/DSpace/tree/DOI
[2] https://jira.duraspace.org/browse/DS-1535
[3] https://wiki.duraspace.org/display/~pbecker/DOI+support+using+DataCite


From: helix84 [mailto:heli...@centrum.sk]
Sent: Saturday, May 11, 2013 11:34 AM
To: Joseph Frank Rogani
Cc: dspace-tech
Subject: Re: [Dspace-tech] Dspace and DOI through DataCite


Hi Joseph,

yes, your message arrived to the list.

DOI doesn't currently have special support in DSpace like handle has, but 
Pascal-Nicolas Becker has been working on it (for DataCite). He's on this list, 
so I think he'll be happy to have you test it. The more testing it gets, the 
more likely it will get to DSpace.
Hallo everybody.

We have been working on developing our archive with DSpace 1.8 with JSPUI, on 
Windows Server 2008.
We have now registered with DataCite in order to have DOIs combined with our 
documents. We have already implemented and registered with Handle but find no 
indication on how to set DOIs within DSpace. (apart form some general documents 
you can find on the internet).

Has anyone already solved this?

Many Thanks
Joe

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Re: [Dspace-tech] Using ftp to upload files into DSpace

2013-04-30 Thread Becker, Pascal-Nicolas
Thanks to Emilio and helix for their answers. I'll consider to solve this using 
HTML5 File API. If I get some useful solutions, I'll share them of course...

Regards,
  Pascal

 -Original Message-
 From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
 helix84
 Sent: Monday, April 29, 2013 12:44 PM
 To: Becker, Pascal-Nicolas
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] Using ftp to upload files into DSpace
 
 Hi Pascal,
 
 the problem you're trying to cope with is that HTTP doesn't have a native way
 of resuming uploads (at least not that browsers actually implement). This is
 the only advantage of FTP over HTTP, other than that, FTP has only
 disadvantages - the need for an active port, unfamiliarity to most modern
 users. I'd argue that you don't want to use a different protocol, only a
 frontend that allows you to resume, show progress and upload multiple files
 in a series. This can be done using HTTP as the protocol - look at e.g. Gmail
 attachment or Youtube video uploads. Yes, this requires an extra
 programmatic support on both server and client side. There are quite a lot of
 existing solutions out there (here's a random example, although it doesn't
 have all the features:
 http://www.solmetra.com/en/disp.php/en_products/flash_uploader/uploa
 der_intro).
 But if you are going to solve this problem, why not solve it in an ideal way
 that will also benefit other DSpace users (assuming you'll share your work).
 
 If this is, for whatever reason, not the way you want to go, I can list the
 different ways how you can get bitstreams to DSpace (but all of them will
 require some customization of your DSpace).
 
 As a sidenote, here's a different solution actively being worked on:
 http://blogs.exeter.ac.uk/openexeterrdm/blog/2012/10/19/big-data-
 submission-tool-at-the-idcc/
 This should be covered by the OR13 presentation Moving BIG DATA into
 DSpace by Lee Taylor from University of Exeter.
 
 
 Regards,
 ~~helix84
 
 Compulsory reading: DSpace Mailing List Etiquette
 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
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[Dspace-tech] Using ftp to upload files into DSpace

2013-04-29 Thread Becker, Pascal-Nicolas
Hi,

I'm looking for a possibility to  load a lot of (50) small files or just some 
big (1 GB) files into an Item of DSpace. Loading them using a HTML form is not 
a good solution for both cases. Does one had the same problem already? Does 
anyone knows a solution for this?

The best idea I had yet is to setup an ftp server on the same* server DSpace is 
running. When a user wants to publish data into DSpace he/she can either upload 
files using the web interface or may choose files out of his/her user folder on 
the ftp server. DSpace then uses these files as if they had been uploaded by 
the web interface. Before I start to write code I would like to know if anyone 
else has done something similarly or has a better idea for the problem 
mentioned above?

Of course I won't use unencrypted ftp, but for the DSpace part it is not 
important if the files where uploaded using sftp or ftp-ssl. We are still 
setting up our DSpace repository, currently we are running tests using DSpace 
3.1 and XMLUI.

Regards,
  Pascal Becker


*Either the ftp server and DSpace runs on the same machine or both uses the 
same network storage so that DSpace can read the files uploaded using the ftp 
server.
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Re: [Dspace-tech] XSLT 2.0 crosswalk

2013-02-06 Thread Becker, Pascal-Nicolas
Hello Joseph,

you probably read the article in the wiki about crosswalks and how to test XSLT 
dissemination crosswalk 
(https://wiki.duraspace.org/display/DSPACE/XsltCrosswalk#XsltCrosswalk-TestingDisseminationCrosswalks).
 Currently it is not possible to test them neither with DSpace 3.0 nor with 
DSpace 3.1, but it is easy to backport the solution coming with DSpace 4.0. 
It's just one file to change, you can find the changes in this pull request: 
https://wiki.duraspace.org/display/DSPACE/XsltCrosswalk#XsltCrosswalk-TestingDisseminationCrosswalks.

Regards,
  Pascal

 -Original Message-
 From: Joseph Greene [mailto:joseph.gre...@ucd.ie]
 Sent: Tuesday, February 05, 2013 3:36 PM
 To: heli...@centrum.sk
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] XSLT 2.0 crosswalk
 
 Many thanks Helix84
 
 Sounds time consuming... I may consider raising this with our contractor, who
 are always keen to donate code back to the community.
 
 Best regards,
 Joseph
 
 -Original Message-
 From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
 helix84
 Sent: 05 February 2013 14:27
 To: Joseph Greene
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] XSLT 2.0 crosswalk
 
 On Tue, Feb 5, 2013 at 1:19 PM, Joseph Greene joseph.gre...@ucd.ie
 wrote:
  Does anyone know if it is possible to use xslt 2.0 in the xslt
  crosswalk plugin? Documentation only seems to point to xslt 1.0.
 
 Unfortunately not, this is a TODO task: [1]
 
 There is info there in the last comment about how to modify Cocoon to
 support XSLT 2.0. This will require you to rebuild DSpace's Cocoon
 dependency from our repository (this one: [2]) and then rebuild DSpace
 using your locally modified Cocoon artifact (from your local Maven repo). If
 you attempt to do that, please report back with your results. Thanks.
 
 
 [1] https://jira.duraspace.org/browse/DS-995
 [2] https://github.com/DSpace/dspace-cocoon-servlet-service-impl
 
 
 Regards,
 ~~helix84
 
 Compulsory reading: DSpace Mailing List Etiquette
 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
 
 
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Re: [Dspace-tech] running dspace 3.x xmlui in Eclipse

2013-01-22 Thread Becker, Pascal-Nicolas
What exactly is your problem? Does the deploy works or does it fail? If it 
fails what is the error message and what’s in the log files?

The problem I had with Netbeans was that the deployment failed because DSpace 
was unable to find its configuration. Without configuration DSpace did not have 
the credentials to connect to the database... In Netbeans it is possible to set 
properties, so that XMLUI will find the dspace installation directory and the 
configuration in it.

Regards,
  Pascal

From: Sara Amato [mailto:sam...@willamette.edu]
Sent: Tuesday, January 22, 2013 5:56 PM
To: dspace-tech
Subject: Re: [Dspace-tech] running dspace 3.x xmlui in Eclipse

The Netbeans thread prompts me to ask how to do this in Eclipse.  I can do the 
Maven and ANT builds and get all the correct files, but am having trouble with 
the tomcat run configuration (at least I think that is where my problem is, I'm 
rather new at this…but can run other servlets)   Any advice on how to run the 
xmlui in Eclipse would be greatly appreciated.

The directions I've found on the web for Eclipse and DSpace are rather sparse, 
though if I get this working I'd be willing to update them, given the caveat 
that they might be from a naive perspective.


On Jan 18, 2013, at 10:50 PM, Benjamin Ryan wrote:


Coelho,
   Change the line in startup.bat (around line 57) to call 
%EXECUTABLE% jpda start %CMD_LINE_ARGS% this will start Tomcat in debug mode.
   Then when Tomcat is running from the Debug menu “Attach 
Debugger...” and fill in the values.
   Use Java Debugger (JPDA), transport dt_socket and port 8000.
   You should then be able to set breakpoints and step through the 
code.

Regards,
   Ben

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From: Coelho Eliana [mailto:eliana.coe...@umontreal.ca]
Sent: 18 January 2013 17:11
To: heli...@centrum.skmailto:heli...@centrum.sk
Cc: dspace-tech@lists.sourceforge.netmailto:dspace-tech@lists.sourceforge.net
Subject: Re: [Dspace-tech] running dspace xmlui in netbeans

Hello,

No, after building the application there is nothing inside the 
[dspace]/webapps/xmlui/WEB-INF/classes/ as you can see in the below screen 
capture:

image001.png


Attached  the xmlui.xconf file.

What is surpring is the fact that when I run the application  NOT in netbeans, 
everything works, as you can see in the following image:

image002.jpg


However, when I  run the application inside netbeans (I would like to see the 
code and follow the execution with the debugger),  there is the problem of 
discovery aspect “not found”. I follow this instructions in order to run the 
xmlui web application in netbeans:

•Select the project for the Web Application you wish to run through 
Tomcat (e.g. DSpace XML-UI (Manakin) :: Web Application Resources for the 
XMLUI). This project must be a war based project, as Tomcat only runs WAR 
files.
•Right click on your selected project and click Properties
•From the Properties window, select the Run category.
•From these Run settings, you'll want to specify the Server which this 
application should run on. Select your newly configured Tomcat server.
•Also, specify a Context Path. This should be the ending path on the 
URL. For example, specifying /xmlui will mean your web application will be 
available from http://localhost:8080/xmlui;
•Now, click over to the Actions category on the left.
•You'll see a list of Actions on the right. Click on the Run Project 
action (as this is the one used to run your web application).

•In that Action's Set Properties section, add a property to point it 
to your DSpace installation. The following is an example on Windows, assuming 
that you've installed DSpace to C:/dspace/:
•For DSpace 1.8.x or lower, set the property: 
dspace.config=C:/dspace/config/dspace.cfg (make sure to include this entire 
line – also, do NOT include quotes around the file path)
•Finally, click OK at the bottom to save all your new project 
settings.


I understand that when netbeans runs this application it generates a war file 
in the xmlui application webapps directory. This war is executed by tomcat 
inside netbeans and it is the application that produces the error:


image003.png


Thank you for trying to help me !

Eliana



-Message d'origine-
De : ivan.ma...@gmail.commailto:ivan.ma...@gmail.com 
[mailto:ivan.ma...@gmail.com] De la part de helix84
Envoyé : 18 janvier 2013 10:50
À : Coelho Eliana
Cc : 

[Dspace-tech] DSpace and other databases

2013-01-15 Thread Becker, Pascal-Nicolas
Hello Everyone.

Is anyone using DSpace with a database other than the official supported ones? 
So does anyone use DSpace with another Database then Postgresql or Oracle?

Thanks in advanced!
  Pascal Becker
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[Dspace-tech] Deploying DSpace 3 rc4 XMLUI out of Netbeans into Tomcat

2012-11-14 Thread Becker, Pascal-Nicolas
Dear all,

I am installing a DSpace 3.0  XMLUI instance here in Berlin. I tried to add the 
XPDF media filters and got an error. To get a deeper look into the source code 
of DSpace I decided to install an IDE. I read 
https://wiki.duraspace.org/display/DSPACE/IDE+Integration+-+DSpace+and+NetBeans 
and installed NetBeans including tomcat. I forked DSpace on github, cloned it 
within Netbeans to my local PC, changed the path for dspace.dir in the 
build.properties and built the DSpace Parent Project with its dependencies. 
Everything went fine, I even got ant to run and to create the necessary 
database tables.

Then I wanted to run tomcat out of Netbeans as described on 
https://wiki.duraspace.org/display/DSPACE/IDE+Integration+-+DSpace+and+NetBeans#IDEIntegration-DSpaceandNetBeans-RunDSpacefromNetBeanswithTomcat
 I followed the instructions and set the Context Path and the Action 
Properties. But everytime I tried to deploy DSpace XMLUI (Manaking) project 
from Netbeans (right click on the project, then click on run) to Tomcat I get 
the following error:

...
BUILD SUCCESS

Total time: 23.579s
Finished at: Wed Nov 14 11:29:38 CET 2012
Final Memory: 11M/84M

NetBeans: Deploying on Apache Tomcat 7.0.27.0
profile mode: false
debug mode: false
force redeploy: true
Undeploying ...
undeploy?path=/xmlui
OK - Undeployed application at context path /xmlui
In-place deployment at 
/home/pbecker/NetBeansProjects/DSpace/dspace-xmlui/target/dspace-xmlui-3.0-rc4-SNAPSHOT
Deployment is in progress...
deploy?config=file%3A%2Ftmp%2Fcontext6224308816931180658.xmlpath=/xmlui
FAIL - Deployed application at context path /xmlui but context failed to start
The module has not been deployed.
See the server log for details.
at 
org.netbeans.modules.j2ee.deployment.devmodules.api.Deployment.deploy(Deployment.java:210)
at 
org.netbeans.modules.maven.j2ee.ExecutionChecker.performDeploy(ExecutionChecker.java:178)
at 
org.netbeans.modules.maven.j2ee.ExecutionChecker.executionResult(ExecutionChecker.java:130)
at 
org.netbeans.modules.maven.execute.MavenCommandLineExecutor.run(MavenCommandLineExecutor.java:212)
at 
org.netbeans.core.execution.RunClassThread.run(RunClassThread.java:153)

The Server logs are quite long, you'll find them below this mail. As I 
understand the problem seems to be that tomcat is unable to find the DSpace 
configuration (Cannot load configuration: 
file:/home/pbecker/usr/apache-tomcat-7.0.27/bin/$%7Bdspace.dir%7D/config/dspace.cfg).
 As far as I understood DSpace this path should be set in web.xml where it is 
filtered by ant (at least in my testinstallation it seems to work like this). I 
hoped by setting the Action Properties in Netbeans as described in the wiki it 
would overwrite the web.xml but obviously it does not.

So did someone got Netbeans to deploy XMLUI to Tomcat? Is it possible at all to 
get this working? Do I need ant to run before the deployment to substitute 
variables?

Any help is appreciated!
Kind regards,
  Pascal Becker

P.S. Please tell me if you think that this mail should be posted to 
dspace-devel instead of dspace-tech.

The Tomcat server logs:

Nov 14, 2012 11:43:06 AM org.apache.catalina.core.StandardContext listenerStart
SEVERE: Exception sending context initialized event to listener instance of 
class org.dspace.servicemanager.servlet.DSpaceKernelServletContextListener
java.lang.RuntimeException: Failure during filter init: Failed to startup the 
DSpace Service Manager: failure starting up spring service manager: Error 
creating bean with name 
'org.dspace.discovery.configuration.DiscoveryConfigurationService' defined in 
URL 
[jar:file:/home/pbecker/NetBeansProjects/DSpace/dspace-xmlui/target/dspace-xmlui-3.0-rc4-SNAPSHOT/WEB-INF/lib/dspace-api-3.0-rc4-SNAPSHOT.jar!/spring/spring-dspace-addon-discovery-configuration-services.xml]:
 Cannot resolve reference to bean 'defaultConfiguration' while setting bean 
property 'map' with key [TypedStringValue: value [default], target type 
[null]]; nested exception is 
org.springframework.beans.factory.BeanCreationException: Error creating bean 
with name 'defaultConfiguration' defined in URL 
[jar:file:/home/pbecker/NetBeansProjects/DSpace/dspace-xmlui/target/dspace-xmlui-3.0-rc4-SNAPSHOT/WEB-INF/lib/dspace-api-3.0-rc4-SNAPSHOT.jar!/spring/spring-dspace-addon-discovery-configuration-services.xml]:
 Initialization of bean failed; nested exception is 
org.springframework.beans.ConversionNotSupportedException: Failed to convert 
property value of type 'java.util.ArrayList' to required type 'java.util.List' 
for property 'sidebarFacets'; nested exception is 
java.lang.IllegalStateException: Cannot convert value of type 
[org.dspace.discovery.configuration.SidebarFacetConfiguration] to required type 

Re: [Dspace-tech] Deploying DSpace 3 rc4 XMLUI out of Netbeans into Tomcat

2012-11-14 Thread Becker, Pascal-Nicolas
Great, thanks for all the infomation!

 -Original Message-
 From: ivan.ma...@gmail.com [mailto:ivan.ma...@gmail.com] On Behalf Of
 helix84
 Sent: Wednesday, November 14, 2012 12:51 PM
 To: Becker, Pascal-Nicolas
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] Deploying DSpace 3 rc4 XMLUI out of Netbeans
 into Tomcat
 
 Also, there are some comments in Jira related to that pull request:
 
 https://jira.duraspace.org/browse/DS-1365
 
 
 Regards,
 ~~helix84
 
 Compulsory reading: DSpace Mailing List Etiquette
 https://wiki.duraspace.org/display/DSPACE/Mailing+List+Etiquette
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[Dspace-tech] Changing permissions for dspace.cfg

2012-11-07 Thread Becker, Pascal-Nicolas
Dear all,

the dspace.cfg contains the credentials for the database connection. At least 
the database password is an information that should be protected. As dspace.cfg 
belongs the user dspace I set the file permissions to 640 and everything works 
fine. But always when I rebuild dspace with the command 'mvn package' Maven 
creates a new file dspace.cfg in the target directory that is readable for 
everybody with an account on the server. Does anybody knows how I can configure 
Maven to set the permissions as mentioned above? Is there any other file except 
building.properties and dspace.cfg that contains the password for the database 
connection?

Thanks in advanced
  Pascal

P.S. I am testing DSpace 3.0 RC3 the UI does not affect the problem described. 
;)
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Re: [Dspace-tech] Changing permissions for dspace.cfg

2012-11-07 Thread Becker, Pascal-Nicolas
 -Original Message-
 From: helix84
 Sent: Wednesday, November 07, 2012 1:17 PM
 Subject: Re: [Dspace-tech] Changing permissions for dspace.cfg
 You could try setting the desired permissions on the [dspace-
 source]/dspace/config/dspace.cfg file. This file is filtered and deployed by
 ant in the last stage of the building process, so it might just keep the
 permissions. Or maybe not (due to filtering), but it's worth a try.

I already did this and it works fine. [dspace-source]/dspace/config/dspace.cfg 
and [dspace]/config/dspace.cfg keep the rights. But as Maven always creates 
[dspace-source]/dspace/target/dspace-version-build/config/dspace.cfg as a new 
file (instead of just making a copy) the permissions on this one will always be 
reseted when I call mvn package. So three of four files (including 
build.protperties) have the right permissions. ;)

  Is there any other file except building.properties and dspace.cfg that
 contains the password for the database connection?
 
 No, this is the only place.
Thank you!

Regards,
  Pascal
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Re: [Dspace-tech] Changing permissions for dspace.cfg

2012-11-07 Thread Becker, Pascal-Nicolas
 -Original Message-
 From: helix84
 Sent: Wednesday, November 07, 2012 1:49 PM
 Subject: Re: [Dspace-tech] Changing permissions for dspace.cfg
...
 Next thing you could try is adding a chmod line (change the octal permissions
 as you need) to the ant build recipe (add the second line after the first,
 existing one):
Ant copies the file from the target to the [dspace]/config directory and 
preserved the permission of the target file. Your solution could help for a 
fresh_install. I had a problem with Maven always reseting the permissions of  
[dspace-source]/dspace/target/dspace-version-build/config/dspace.cfg. It took 
me some time to get into the assembly process of maven, but I found a solution. 
Adding the following line to the maven assembly recipe helps:

https://github.com/DSpace/DSpace/blob/master/dspace/src/main/assembly/assembly.xml#L75
sourceconfig/dspace.cfg/source
 fileMode640/fileMode

Thanks helix for your help!

Regards,
  Pascal
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Re: [Dspace-tech] [KE1019161] URN in DSpace

2012-10-30 Thread Becker, Pascal-Nicolas
Hi,

please let me introduce myself first. My name is Pascal Becker, I'm working for 
Technische Universität Berlin. We do not use DSpace yet but we want to develop 
an institutional repository for research data an publications based on DSpace.

URNs are quite often used by German institutions. As library in Germany you 
have to submit some of the digital objects in your repository to the German 
National Library (DNB) for archiving. Every item archived by DNB gets a URN. If 
the delivering institution has a URN namespace they have to generate a URN 
before delivering the item to the DNB. If the institution does not have a URN 
namespace the DNB generates a URN.

To migrate existing repositories in Germany to DSpace it would be very useful 
if DSpace could import existing URNs for old items as well generate new URNs 
for new items.

I hope that answers some of your questions about the situation in Germany.

If you want to know more about URNs in details there are some RFCs: RFC 1737 
(Functional Requirements for Uniform Resource Names), RFC 2141 (URN Syntax), 
RFC 3044 (Using The ISSN as URN within an ISSN-URN Namespace), RFC 3187 (Using 
International Standard Book Numbers as Uniform Resource Names), RFC 3188 (Using 
National Bibliography Numbers as Uniform Resource Names).

Kind regards
   Pascal Becker

 -Original Message-
 From: helix84 [mailto:heli...@centrum.sk]
 Sent: Tuesday, October 30, 2012 10:04 AM
 To: marco.we...@kesslernetworks.de
 Cc: dspace-tech@lists.sourceforge.net
 Subject: Re: [Dspace-tech] [KE1019161] URN in DSpace
 
 Are you using JSPUI or XMLUI?
 
 Are you submitting new items using the submission process, using some
 batch import or both?
 
 DSpace can't do it without some new code, but either we can add this or it
 can be pre-generated outside of DSpace, depending on how you're
 submitting new items to DSpace.
 
 Do you think this would be generally useful for more institutions, even if 
 only
 within Germany?
 
 Thanks for the explanation, I actually can read German, though, so the link
 would have been enough :)
 
 Regards,
 ~~helix84
 
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Re: [Dspace-tech] [KE1019161] URN in DSpace

2012-10-30 Thread Becker, Pascal-Nicolas
  To migrate existing repositories in Germany to DSpace it would be very
 useful if DSpace could import existing URNs for old items as well generate
 new URNs for new items.
 
 I think my last comment might be misunderstood to mean that URNs couldn't
 be put into item's metadata outside of the submission or import process.
 That is not true. It's perfectly possible to fill in the metadata of existing 
 items
 at any time. What I meant was automated _generation_ of URN from other
 metadata (like institution namespace, ISBN etc.) would work only during
 submission in my proposal (and it was only a proposal, so it's not set in
 stone).

If you want to implement URNs in DSpace you can just imagine you are 
implementing Handles, persistent URLs, DOIs or any other kind of persistent 
identifier. At which point do you want to register a Handle: on submission of 
single items only or during import of many items as well? I would appreciate if 
DSpace could generate URNs during import as well as after submission of a 
single item. But in both cases it would be great if it is possible to manually 
overwrite the generate URN by existing ones.

To implement URNs one thing is to be able to generate new URNs. The other task 
is to register generated URNs. The URN-namespace urn:nbn:de is handled by 
German National Library (DNB). An institution that gets a namespace under 
urn:nbn:de has to register new URNs at DNB. This can be done manually or 
automatically. For automatically registrations of URNs the DNB is Harvesting 
your OAI-Interface regularly. Your OAI-Interface has to support epicure as 
metadataformat. Information about that can be found at 
http://persistent-identifier.de/?link=210lang=en. A schema for epicure as part 
of an OAI can be found here: 
http://www.persistent-identifier.de/xepicur/version1.0/xepicur.xsd

As I mentioned before, I'm new to DSpace so I think I'm yet the wrong person to 
develop URN support for it. But if some developer wants to do it, I would be 
glad to help out with all necessary information and/or testing.

Kind regards
  Pascal Becker
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