Re: [galaxy-dev] Repeats shown upside down on galaxy-central

2014-11-12 Thread Peter Cock
Hi Sam,


On Thu, Nov 13, 2014 at 6:25 AM, Aysam Guerler aysam.guer...@gmail.com
wrote:

 Hey Peter,

 I have modified the data selectors appearance by adding a single select
 field as default option. It resembles the previous functionality now and I
 think its an improvement.


Great. I won't be able to try this until next week at the earliest though.

Regarding the length of the select box I think that the tool form overall
 looks more organized now since almost all the input elements have the same
 length. However I will discuss this with the others and see what the
 consensus is.


Perhaps a confounding variable is how wide your screen is? In my
screenshots the visual cue that this is a select box is on the extreme
right and thus separated from the text it is connected to.  I think that
makes it a bad GUI design choice (as well somehow not liking the visual
aesthetic, which is a more personal impression).

Thanks,

Peter
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Re: [galaxy-dev] Repeats shown upside down on galaxy-central

2014-11-12 Thread Aysam Guerler
I see your point maybe a maximum width will fix the issue for wide screens.
I look into it.

Thanks,
Sam

On Wed, Nov 12, 2014 at 7:42 PM, Peter Cock p.j.a.c...@googlemail.com
wrote:

 Hi Sam,


 On Thu, Nov 13, 2014 at 6:25 AM, Aysam Guerler aysam.guer...@gmail.com
 wrote:

 Hey Peter,

 I have modified the data selectors appearance by adding a single select
 field as default option. It resembles the previous functionality now and I
 think its an improvement.


 Great. I won't be able to try this until next week at the earliest though.

 Regarding the length of the select box I think that the tool form overall
 looks more organized now since almost all the input elements have the same
 length. However I will discuss this with the others and see what the
 consensus is.


 Perhaps a confounding variable is how wide your screen is? In my
 screenshots the visual cue that this is a select box is on the extreme
 right and thus separated from the text it is connected to.  I think that
 makes it a bad GUI design choice (as well somehow not liking the visual
 aesthetic, which is a more personal impression).

 Thanks,

 Peter


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Re: [galaxy-dev] Repeats shown upside down on galaxy-central

2014-11-06 Thread Aysam Guerler
Hi Peter,

Yes we changed this on purpose, however it is open to discussion. The
advantage is that the user does not have to scroll down after adding a new
repeat block. Additionally it enables users to easily add more than one
repeat block quickly, since the insert button does not relocate on the
screen after adding new repeat blocks.

Thanks,
Sam

On Mon, Nov 3, 2014 at 7:25 AM, Peter Cock p.j.a.c...@googlemail.com
wrote:

 Hi all,

 I'm running galaxy-central as my development server, and noticed what
 to me is a regression with repeat parameters,

 e.g.
 https://github.com/peterjc/pico_galaxy/blob/master/tools/clc_assembly_cell/clc_mapper.xml

 Read group:
 [+ insert read group]
 * 1: Read Group
 * 2: Read Group

 which on clicking becomes:

 Read group:
 [+ insert read group]
 * 2: Read Group
 * 1: Read Group

 This to me is upside down, the current behaviour on galaxy-dist is
 more natural (and also pluralises the group heading):

 Read Groups
 * Read Group 1
 [Add new Read Group]

 which on clicking becomes:

 Read Groups
 * Read Group 1
 * Read Group 2
 [Add new Read Group]

 Is this a deliberate change? If so, why?

 Peter
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Re: [galaxy-dev] Repeats shown upside down on galaxy-central

2014-11-06 Thread Peter Cock
Hi Sam,

I found the old approach (new repeat blocks at bottom) worked fine
when adding blocks one by one and completing them as I went
(which means once you have filled in the new block, you have
scrolled down to the button ready to add another block if needed).

If find the new approach (new blocks inserted at top) visually
confusing as I am used to filling in forms from top to bottom.

I do concede the approach makes it easy to add several repeats
with a few clicks, and then fill them in - but personally that isn't
a common thing for me to do, and I do not think this change is
worth the confusion.

There are a number of other visual changes on galaxy-central
compared to the current release, so of which seem harmless
like the boolean parameters becoming a yes/no toggle in place
of a tick box, others are more daunting/scary (e.g. collection
related changes to the file picker for automatic batch jobs).

Is there any draft documentation on these changes being prepared
to go into the next release notes? This is the sort of thing local
Galaxy Admins would appreciate to anticipate local user queries.

Thanks,

Peter

On Thu, Nov 6, 2014 at 12:45 PM, Aysam Guerler aysam.guer...@gmail.com wrote:
 Hi Peter,

 Yes we changed this on purpose, however it is open to discussion. The
 advantage is that the user does not have to scroll down after adding a new
 repeat block. Additionally it enables users to easily add more than one
 repeat block quickly, since the insert button does not relocate on the
 screen after adding new repeat blocks.

 Thanks,
 Sam

 On Mon, Nov 3, 2014 at 7:25 AM, Peter Cock p.j.a.c...@googlemail.com
 wrote:

 Hi all,

 I'm running galaxy-central as my development server, and noticed what
 to me is a regression with repeat parameters,

 e.g.
 https://github.com/peterjc/pico_galaxy/blob/master/tools/clc_assembly_cell/clc_mapper.xml

 Read group:
 [+ insert read group]
 * 1: Read Group
 * 2: Read Group

 which on clicking becomes:

 Read group:
 [+ insert read group]
 * 2: Read Group
 * 1: Read Group

 This to me is upside down, the current behaviour on galaxy-dist is
 more natural (and also pluralises the group heading):

 Read Groups
 * Read Group 1
 [Add new Read Group]

 which on clicking becomes:

 Read Groups
 * Read Group 1
 * Read Group 2
 [Add new Read Group]

 Is this a deliberate change? If so, why?

 Peter
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Re: [galaxy-dev] Repeats shown upside down on galaxy-central

2014-11-06 Thread Aysam Guerler
Alright, I think you are right. The possible confusion is not worth the
benefits. I have switched the ordering back to the classic sorting. I will
now look into the dataset selector and see how to revise it. Thanks for
pointing these things out.

Thanks,
Sam

On Thu, Nov 6, 2014 at 8:18 AM, Peter Cock p.j.a.c...@googlemail.com
wrote:

 Hi Sam,

 I found the old approach (new repeat blocks at bottom) worked fine
 when adding blocks one by one and completing them as I went
 (which means once you have filled in the new block, you have
 scrolled down to the button ready to add another block if needed).

 If find the new approach (new blocks inserted at top) visually
 confusing as I am used to filling in forms from top to bottom.

 I do concede the approach makes it easy to add several repeats
 with a few clicks, and then fill them in - but personally that isn't
 a common thing for me to do, and I do not think this change is
 worth the confusion.

 There are a number of other visual changes on galaxy-central
 compared to the current release, so of which seem harmless
 like the boolean parameters becoming a yes/no toggle in place
 of a tick box, others are more daunting/scary (e.g. collection
 related changes to the file picker for automatic batch jobs).

 Is there any draft documentation on these changes being prepared
 to go into the next release notes? This is the sort of thing local
 Galaxy Admins would appreciate to anticipate local user queries.

 Thanks,

 Peter

 On Thu, Nov 6, 2014 at 12:45 PM, Aysam Guerler aysam.guer...@gmail.com
 wrote:
  Hi Peter,
 
  Yes we changed this on purpose, however it is open to discussion. The
  advantage is that the user does not have to scroll down after adding a
 new
  repeat block. Additionally it enables users to easily add more than one
  repeat block quickly, since the insert button does not relocate on the
  screen after adding new repeat blocks.
 
  Thanks,
  Sam
 
  On Mon, Nov 3, 2014 at 7:25 AM, Peter Cock p.j.a.c...@googlemail.com
  wrote:
 
  Hi all,
 
  I'm running galaxy-central as my development server, and noticed what
  to me is a regression with repeat parameters,
 
  e.g.
 
 https://github.com/peterjc/pico_galaxy/blob/master/tools/clc_assembly_cell/clc_mapper.xml
 
  Read group:
  [+ insert read group]
  * 1: Read Group
  * 2: Read Group
 
  which on clicking becomes:
 
  Read group:
  [+ insert read group]
  * 2: Read Group
  * 1: Read Group
 
  This to me is upside down, the current behaviour on galaxy-dist is
  more natural (and also pluralises the group heading):
 
  Read Groups
  * Read Group 1
  [Add new Read Group]
 
  which on clicking becomes:
 
  Read Groups
  * Read Group 1
  * Read Group 2
  [Add new Read Group]
 
  Is this a deliberate change? If so, why?
 
  Peter

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