Re: [Ganglia-general] gmetad segmentation fault

2015-12-11 Thread Cristovao Cordeiro
Hi guys,

just to update on this:
 - I've removed my ganglia-gmetad/gmond and libganglia from everywhere and 
installed the most recent versions from the epel repository. The error is still 
there.

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro


From: Cristovao Cordeiro
Sent: 08 December 2015 11:49
To: Marcello Morgotti
Cc: ganglia-general@lists.sourceforge.net
Subject: Re: [Ganglia-general] gmetad segmentation fault

Hi everyone,

sorry for the late reply.
@Devon
thanks for looking into it.
i do have .so.0 and .so.0.0.0 in my system and I am not using any custom 
modules. The Ganglia deployment is however a bit different from the standard:
  - in one single VM, gmetad is running (always) and several gmond daemons are 
running in the background (daemon gmond -c /etc/ganglia/gmond_N.conf), all 
receiving metric through unicast.
The Ganglia package is built by me as well, from the source code. I am 
currently building and using Ganglia 3.7.1 (taken from 
http://sourceforge.net/projects/ganglia/files/ganglia%20monitoring%20core/3.7.1/).
 I build the Ganglia RPM myself for 2 reasons:
1 - have Ganglia available in YUM
2 - minor changes to ganglia-web's apache.conf

I have other monitors running 3.6.0 and no errors there. But on those I have 
installed Ganglia manually and directly without building a RPM.

I also see 3.7.2 already available in the epel repository so I’ll might try 
this.

Regarding the compilation with debug symbols…

@Marcello
did you get a chance to do it?


Best regards,
Cristóvão José Domingues Cordeiro




On 24 Nov 2015, at 18:51, Marcello Morgotti 
<m.morgo...@cineca.it<mailto:m.morgo...@cineca.it>> wrote:

Hello,

I'd like to join the discussion because this problem is affecting us as
well. We have the problem on two different installations:

2 server in active-active HA configuration, each with CentOS 7.1 +
ganglia 3.7.2 + rrdcached monitoring systems A,B,C,D
2 server in active-active HA configuration, each with RedHat 6.5 +
ganglia 3.7.2 + rrdcached  monitoring systems E,F,G,H

In both cases the ganglia rpm packages are taken from EPEL repository.
The curios thing is that every time that the segfault happens it happens
almost at the same time.
I.e. for Centos7 systems:

Nov 15 12:27:35 rp02 kernel: traps: gmetad[2620] general protection
ip:7fd70d62f82c sp:7fd6fdcb3af0 error:0 in
libganglia.so.0.0.0[7fd70d624000+14000]
Nov 15 12:27:35 rp02 systemd: gmetad.service: main process exited,
code=killed, status=11/SEGV
Nov 15 12:27:35 rp02 systemd: Unit gmetad.service entered failed state.
Nov 15 12:27:41 rp01 kernel: traps: gmetad[6977] general protection
ip:7fc1bdde582c sp:7fc1ae469af0 error:0 in
libganglia.so.0.0.0[7fc1bddda000+14000]
Nov 15 12:27:41 rp01 systemd: gmetad.service: main process exited,
code=killed, status=11/SEGV
Nov 15 12:27:41 rp01 systemd: Unit gmetad.service entered failed state.


Hope this helps and adds infomations, I will try to build a debug
version of gmetad to see if it's possible to generate a core dump.

Best Regards,
Marcello

On 23/11/2015 17:30, Devon H. O'Dell wrote:
It's just a system versioning thing for shared libraries. Usually .so
is a soft link to .so.0 which is a soft link to .so.0.0.0. This is
intended to be an ABI versioning interface, but it's not super
frequently used. Are these legitimately different files on your
system?

The crash is in hash_delete:

003b2c00b780 :
...
  3b2c00b797:   48 8b 07mov(%rdi),%rax
  3b2c00b79a:   48 8d 34 30 lea(%rax,%rsi,1),%rsi
  3b2c00b79e:   48 39 f0cmp%rsi,%rax
  3b2c00b7a1:   73 37   jae3b2c00b7da <hash_delete+0x5a>
  3b2c00b7a3:   48 bf b3 01 00 00 00movabs $0x10001b3,%rdi
  3b2c00b7aa:   01 00 00
  3b2c00b7ad:   0f 1f 00nopl   (%rax)
 3b2c00b7b0:   0f b6 08movzbl (%rax),%ecx
  3b2c00b7b3:   48 83 c0 01 add$0x1,%rax
  3b2c00b7b7:   48 31 caxor%rcx,%rdx
  3b2c00b7ba:   48 0f af d7 imul   %rdi,%rdx
  3b2c00b7be:   48 39 c6cmp%rax,%rsi
  3b2c00b7c1:   77 ed   ja 3b2c00b7b0 <hash_delete+0x30>
...

%rdi is the first argument to the function, so %rax is the datum_t
*key, and (%rax) is key->data. hash_key has been inlined here.
Unfortunately, what appears to be happening is that some key has
already been removed from the hash table and freed, and based on your
description of the problem, that was attempted concurrently. Your
kernel crash shows that we were trying to dereference a NULL pointer,
so it would appear that key->data is NULL.

Unfortunately, it is not clear without a backtrace what sort of key
specifically is in question here, but perhaps someone else might have
some context based on recent changes. (I don't think this is related
to my work on the hashes).

Are you running any custom modules (either in C or Python)? Would i

Re: [Ganglia-general] gmetad segmentation fault

2015-12-08 Thread Cristovao Cordeiro
Hi everyone,

sorry for the late reply.
@Devon
thanks for looking into it.
i do have .so.0 and .so.0.0.0 in my system and I am not using any custom 
modules. The Ganglia deployment is however a bit different from the standard:
  - in one single VM, gmetad is running (always) and several gmond daemons are 
running in the background (daemon gmond -c /etc/ganglia/gmond_N.conf), all 
receiving metric through unicast.
The Ganglia package is built by me as well, from the source code. I am 
currently building and using Ganglia 3.7.1 (taken from 
http://sourceforge.net/projects/ganglia/files/ganglia%20monitoring%20core/3.7.1/).
 I build the Ganglia RPM myself for 2 reasons:
1 - have Ganglia available in YUM
2 - minor changes to ganglia-web's apache.conf

I have other monitors running 3.6.0 and no errors there. But on those I have 
installed Ganglia manually and directly without building a RPM.

I also see 3.7.2 already available in the epel repository so I’ll might try 
this.

Regarding the compilation with debug symbols…

@Marcello
did you get a chance to do it?


Best regards,
Cristóvão José Domingues Cordeiro




On 24 Nov 2015, at 18:51, Marcello Morgotti 
<m.morgo...@cineca.it<mailto:m.morgo...@cineca.it>> wrote:

Hello,

I'd like to join the discussion because this problem is affecting us as
well. We have the problem on two different installations:

2 server in active-active HA configuration, each with CentOS 7.1 +
ganglia 3.7.2 + rrdcached monitoring systems A,B,C,D
2 server in active-active HA configuration, each with RedHat 6.5 +
ganglia 3.7.2 + rrdcached  monitoring systems E,F,G,H

In both cases the ganglia rpm packages are taken from EPEL repository.
The curios thing is that every time that the segfault happens it happens
almost at the same time.
I.e. for Centos7 systems:

Nov 15 12:27:35 rp02 kernel: traps: gmetad[2620] general protection
ip:7fd70d62f82c sp:7fd6fdcb3af0 error:0 in
libganglia.so.0.0.0[7fd70d624000+14000]
Nov 15 12:27:35 rp02 systemd: gmetad.service: main process exited,
code=killed, status=11/SEGV
Nov 15 12:27:35 rp02 systemd: Unit gmetad.service entered failed state.
Nov 15 12:27:41 rp01 kernel: traps: gmetad[6977] general protection
ip:7fc1bdde582c sp:7fc1ae469af0 error:0 in
libganglia.so.0.0.0[7fc1bddda000+14000]
Nov 15 12:27:41 rp01 systemd: gmetad.service: main process exited,
code=killed, status=11/SEGV
Nov 15 12:27:41 rp01 systemd: Unit gmetad.service entered failed state.


Hope this helps and adds infomations, I will try to build a debug
version of gmetad to see if it's possible to generate a core dump.

Best Regards,
Marcello

On 23/11/2015 17:30, Devon H. O'Dell wrote:
It's just a system versioning thing for shared libraries. Usually .so
is a soft link to .so.0 which is a soft link to .so.0.0.0. This is
intended to be an ABI versioning interface, but it's not super
frequently used. Are these legitimately different files on your
system?

The crash is in hash_delete:

003b2c00b780 :
...
  3b2c00b797:   48 8b 07mov(%rdi),%rax
  3b2c00b79a:   48 8d 34 30 lea(%rax,%rsi,1),%rsi
  3b2c00b79e:   48 39 f0cmp%rsi,%rax
  3b2c00b7a1:   73 37   jae3b2c00b7da <hash_delete+0x5a>
  3b2c00b7a3:   48 bf b3 01 00 00 00movabs $0x10001b3,%rdi
  3b2c00b7aa:   01 00 00
  3b2c00b7ad:   0f 1f 00nopl   (%rax)
 3b2c00b7b0:   0f b6 08movzbl (%rax),%ecx
  3b2c00b7b3:   48 83 c0 01 add$0x1,%rax
  3b2c00b7b7:   48 31 caxor%rcx,%rdx
  3b2c00b7ba:   48 0f af d7 imul   %rdi,%rdx
  3b2c00b7be:   48 39 c6cmp%rax,%rsi
  3b2c00b7c1:   77 ed   ja 3b2c00b7b0 <hash_delete+0x30>
...

%rdi is the first argument to the function, so %rax is the datum_t
*key, and (%rax) is key->data. hash_key has been inlined here.
Unfortunately, what appears to be happening is that some key has
already been removed from the hash table and freed, and based on your
description of the problem, that was attempted concurrently. Your
kernel crash shows that we were trying to dereference a NULL pointer,
so it would appear that key->data is NULL.

Unfortunately, it is not clear without a backtrace what sort of key
specifically is in question here, but perhaps someone else might have
some context based on recent changes. (I don't think this is related
to my work on the hashes).

Are you running any custom modules (either in C or Python)? Would it
be possible for you to build gmond and libganglia with debugging
symbols and generate a core dump?

--dho


2015-11-23 1:29 GMT-08:00 Cristovao Cordeiro 
<cristovao.corde...@cern.ch<mailto:cristovao.corde...@cern.ch>>:
Hi Devon,

thanks for the help.
Attached follows the binary file.

btw, what is the difference between so.0 and so.0.0.0?

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro


On 17 Nov 2015, at 19:16, Devon H. O'Dell 
<devon

[Ganglia-general] negative spikes on the aggregated summary plot

2015-11-23 Thread Cristovao Cordeiro
Hi all,

I am seeing a strange behaviour on the aggregated summary plots whereby I see 
negative spikes that do not appear on any of the underlying clusters. These 
spikes can be quite frequent (every other pull...)
Has anyone seen this before?
Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro




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Re: [Ganglia-general] gmetad segmentation fault

2015-11-17 Thread Cristovao Cordeiro
Hi everyone,

any news on this?
Another symptom is that this happens quite as often as the cluster changes, 
meaning that the more activity there is in the cluster (delete machines, 
create...) the more this issue happens. Could it be related with the deletion 
of old hosts by gmond causing gmetad to try to access files that are already 
gone?

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro



From: Cristovao Cordeiro [cristovao.corde...@cern.ch]
Sent: 09 November 2015 13:40
To: Devon H. O'Dell
Cc: Ganglia-general@lists.sourceforge.net
Subject: Re: [Ganglia-general] gmetad segmentation fault

Hi Devon,

thanks!

 * I don't think there was a core dump. At least that is not stated in 
/var/log/messages and I don't find anything relevant in /var/spool/abrt/
 * I am running 3.7.1
 * The addr2line returns ??:0. Also with gdb:
   > gdb /usr/lib64/libganglia.so.0.0.0
   ...
   Reading symbols from /usr/lib64/libganglia.so.0.0.0...(no debugging symbols 
found)...done.

Some more information about my setup:
 - I am running several gmonds in the same machine, so all my data_sources are 
to localhost.

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro



From: Devon H. O'Dell [devon.od...@gmail.com]
Sent: 09 November 2015 13:12
To: Cristovao Cordeiro
Cc: Ganglia-general@lists.sourceforge.net
Subject: Re: [Ganglia-general] gmetad segmentation fault

Hi!

I have a couple of initial questions that might help figure out the problem:

 * Did you get a core dump?
 * What version of ganglia are you running?
 * This crash happened within libganglia.so at offset 0xb7b0. Can you run:

$ addr2line -e /path/to/libganglia.so.0.0.0 0xb7b0

and paste the output? If that does not work, there are a couple other
things we can try to get information about the fault, but hopefully we
can just work from there.

Kind regards,

Devon H. O'Dell

2015-11-09 0:13 GMT-08:00 Cristovao Cordeiro <cristovao.corde...@cern.ch>:
> Dear all,
>
> I have several Ganglia monitors running with similar configurations in
> different machines (VMs) and for a long time now I have been experiencing
> segmentation faults at random times. It seems to happen more on gmetads that
> are monitoring larger number of nodes.
>
> In /var/log/messages I see:
>
> kernel: gmetad[3948]: segfault at 0 ip 003630c0b7b0 sp 7f0ecbffebc0
> error 4 in libganglia.so.0.0.0[3630c0+15000]
>
>
> and in the console output there's only this:
>
> /bin/bash: line 1: 30375 Terminated  /usr/sbin/gmetad
>
>[FAILED]
>
>
> gmetad does not have any special configuration besides the RRD location
> which in on a 4Gb ramdisk.
>
>
> Cumprimentos / Best regards,
> Cristóvão José Domingues Cordeiro
>
>
> --
> Presto, an open source distributed SQL query engine for big data, initially
> developed by Facebook, enables you to easily query your data on Hadoop in a
> more interactive manner. Teradata is also now providing full enterprise
> support for Presto. Download a free open source copy now.
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Re: [Ganglia-general] gmetad segmentation fault

2015-11-09 Thread Cristovao Cordeiro
Hi Devon,

thanks!

 * I don't think there was a core dump. At least that is not stated in 
/var/log/messages and I don't find anything relevant in /var/spool/abrt/
 * I am running 3.7.1
 * The addr2line returns ??:0. Also with gdb:
   > gdb /usr/lib64/libganglia.so.0.0.0
   ...
   Reading symbols from /usr/lib64/libganglia.so.0.0.0...(no debugging symbols 
found)...done.

Some more information about my setup:
 - I am running several gmonds in the same machine, so all my data_sources are 
to localhost.

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro



From: Devon H. O'Dell [devon.od...@gmail.com]
Sent: 09 November 2015 13:12
To: Cristovao Cordeiro
Cc: Ganglia-general@lists.sourceforge.net
Subject: Re: [Ganglia-general] gmetad segmentation fault

Hi!

I have a couple of initial questions that might help figure out the problem:

 * Did you get a core dump?
 * What version of ganglia are you running?
 * This crash happened within libganglia.so at offset 0xb7b0. Can you run:

$ addr2line -e /path/to/libganglia.so.0.0.0 0xb7b0

and paste the output? If that does not work, there are a couple other
things we can try to get information about the fault, but hopefully we
can just work from there.

Kind regards,

Devon H. O'Dell

2015-11-09 0:13 GMT-08:00 Cristovao Cordeiro <cristovao.corde...@cern.ch>:
> Dear all,
>
> I have several Ganglia monitors running with similar configurations in
> different machines (VMs) and for a long time now I have been experiencing
> segmentation faults at random times. It seems to happen more on gmetads that
> are monitoring larger number of nodes.
>
> In /var/log/messages I see:
>
> kernel: gmetad[3948]: segfault at 0 ip 003630c0b7b0 sp 7f0ecbffebc0
> error 4 in libganglia.so.0.0.0[3630c0+15000]
>
>
> and in the console output there's only this:
>
> /bin/bash: line 1: 30375 Terminated  /usr/sbin/gmetad
>
>[FAILED]
>
>
> gmetad does not have any special configuration besides the RRD location
> which in on a 4Gb ramdisk.
>
>
> Cumprimentos / Best regards,
> Cristóvão José Domingues Cordeiro
>
>
> --
> Presto, an open source distributed SQL query engine for big data, initially
> developed by Facebook, enables you to easily query your data on Hadoop in a
> more interactive manner. Teradata is also now providing full enterprise
> support for Presto. Download a free open source copy now.
> http://pubads.g.doubleclick.net/gampad/clk?id=250295911=/4140
> ___
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> Ganglia-general@lists.sourceforge.net
> https://lists.sourceforge.net/lists/listinfo/ganglia-general
>

--
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more interactive manner. Teradata is also now providing full enterprise
support for Presto. Download a free open source copy now.
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[Ganglia-general] gmetad segmentation fault

2015-11-09 Thread Cristovao Cordeiro
Dear all,

I have several Ganglia monitors running with similar configurations in 
different machines (VMs) and for a long time now I have been experiencing 
segmentation faults at random times. It seems to happen more on gmetads that 
are monitoring larger number of nodes.

In /var/log/messages I see:

kernel: gmetad[3948]: segfault at 0 ip 003630c0b7b0 sp 7f0ecbffebc0 
error 4 in libganglia.so.0.0.0[3630c0+15000]


and in the console output there's only this:

/bin/bash: line 1: 30375 Terminated  /usr/sbin/gmetad

   [FAILED]


gmetad does not have any special configuration besides the RRD location which 
in on a 4Gb ramdisk.

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro

--
Presto, an open source distributed SQL query engine for big data, initially
developed by Facebook, enables you to easily query your data on Hadoop in a 
more interactive manner. Teradata is also now providing full enterprise
support for Presto. Download a free open source copy now.
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[Ganglia-general] dynamic gmond parameters

2015-10-02 Thread Cristovao Cordeiro
Hi,

is it possible to have gmond parameters that can get environment variables or 
simply return the value of a bash expression? Something like:
 ...
 override_hostname = "%{HOSTNAME}_myname"
 ...
(just an example)

Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro

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[Ganglia-general] gmetad stopping constantly

2015-06-23 Thread Cristovao Cordeiro
Hello everyone,

I've been experiencing some issues with gmetad as it is breaking up very often, 
with not apparent reason. With debug_level set to 10 in gmetad I see the 
following when it stops:

Cleanup thread running...
Cleanup deleting host 70202811-5430-47f5-a880-502a70f020d7
Cleanup deleting host 70202811-5430-47f5-a880-502a70f020d7
/bin/bash: line 1: 10165 Segmentation fault  /usr/sbin/gmetad
I Ganglia setup is the following:
One VM with gmetad, gweb and several (about 10, one per cluster) gmonds running 
in background and collecting all metrics from each cluster respectively, 
through unicast.

My RRD in running in tmpfs and the Ganglia version is the last one.

Thanks.

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro

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Re: [Ganglia-general] Ganglia-Web 3.7.0 released - includes security fixes

2015-05-29 Thread Cristovao Cordeiro
Hi,

I think I've sent an email about this many months ago.
Now after the update, this is the output from skipfish:
Summary:
The application is missing the 'httpOnly' cookie attribute

Vulnerability Detection Result:
The cookies
...
are missing the httpOnly attribute.

Impact:
Application

Solution:
Set the 'httpOnly' attribute for any session cookies.

Affected Software/OS:
Application with session handling in cookies.

Vulnerability Insight:
The flaw is due to a cookie is not using the 'httpOnly' attribute. This
allows a cookie to be accessed by JavaScript which could lead to session hijac!
king attacks.

Vulnerability Detection Method:
Check all cookies sent by the application for a missing 'httpOnly' attribute
Details:
Missing httpOnly Cookie Attribute


Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro


From: Vladimir Vuksan [vli...@veus.hr]
Sent: 28 May 2015 22:57
To: Cristovao Cordeiro; ganglia-develop...@lists.sourceforge.net; Ganglia
Subject: Re: [Ganglia-general] Ganglia-Web 3.7.0 released - includes security 
fixes

Is there an issue open for this and what are the details ?

Vladimir

On 05/28/2015 04:40 AM, Cristovao Cordeiro wrote:
Hi all,

was this issue addressed:
NVT: Missing httpOnly Cookie Attribute
OID: 1.3.6.1.4.1.25623.1.0.105925
Threat: Medium (CVSS: 5.0)
Port: 80/tcp

Because after updating I still have it. Any idea on how to solve it?
Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro
IT Department - 28/R-018
CERN

From: Vladimir Vuksan [vli...@veus.hrmailto:vli...@veus.hr]
Sent: 21 May 2015 20:22
To: 
ganglia-develop...@lists.sourceforge.netmailto:ganglia-develop...@lists.sourceforge.net;
 Ganglia
Subject: [Ganglia-general] Ganglia-Web 3.7.0 released - includes security fixes

Hi all,

Ganglia Web 3.7.0 has been released. Major highlights are

  *   Cubism integration 
https://github.com/ganglia/ganglia-web/wiki/Cubism-integration
  *   Ganglia Reporting 
https://github.com/ganglia/ganglia-web/wiki/Ganglia-Reports
  *   Couple reported XSS issues have been corrected

If you are running Ganglia Web on a publicly accessible server you are strongly 
advised to upgrade ASAP.

You can download latest release from here

https://sourceforge.net/projects/ganglia/files/ganglia-web/

Installation instructions can be found here

https://github.com/ganglia/ganglia-web/wiki#Installation

Vladimir

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Re: [Ganglia-general] Ganglia-Web 3.7.0 released - includes security fixes

2015-05-28 Thread Cristovao Cordeiro
Hi all,

was this issue addressed:
NVT: Missing httpOnly Cookie Attribute
OID: 1.3.6.1.4.1.25623.1.0.105925
Threat: Medium (CVSS: 5.0)
Port: 80/tcp

Because after updating I still have it. Any idea on how to solve it?
Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro
IT Department - 28/R-018
CERN

From: Vladimir Vuksan [vli...@veus.hr]
Sent: 21 May 2015 20:22
To: ganglia-develop...@lists.sourceforge.net; Ganglia
Subject: [Ganglia-general] Ganglia-Web 3.7.0 released - includes security fixes

Hi all,

Ganglia Web 3.7.0 has been released. Major highlights are

  *   Cubism integration 
https://github.com/ganglia/ganglia-web/wiki/Cubism-integration
  *   Ganglia Reporting 
https://github.com/ganglia/ganglia-web/wiki/Ganglia-Reports
  *   Couple reported XSS issues have been corrected

If you are running Ganglia Web on a publicly accessible server you are strongly 
advised to upgrade ASAP.

You can download latest release from here

https://sourceforge.net/projects/ganglia/files/ganglia-web/

Installation instructions can be found here

https://github.com/ganglia/ganglia-web/wiki#Installation

Vladimir
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[Ganglia-general] GANGLIA_XML - host's REPORTED value period?

2015-04-21 Thread Cristovao Cordeiro
Hi,

just one quick question:
what's the periodicity for each gmond host to report to the Collector Gmond? 
Because on the REPORTED value of Ganglia's XML, I find random timestamps.

If there is any periodicity, is it any how related with gmetad's default 15 
seconds polling?
Thanks

Cumprimentos / Best regards,
Cristóvão José Domingues Cordeiro

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