Re: [R] R GUI plot by color
Ok, I will take it into account in the future. Thanks!! -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297p4710382.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI plot by color
On 7/24/2015 6:23 AM, Jim Lemon wrote: Hi jpara3, Your example, when I got it to go: one-c(3,2,2) two-c(a,b,b) data-dataframe(one,two) plot(data$one,col=data$two) Wow Jim. Psychic indeed! Not only did you answer with NO reproducible example, but on round 2 you fixed a non-working example and explained why it was an accident that it works. What is the stock market about to do? :) jpara3 - Those of us without Jim's talent can be more helpful if you read and follow the guide at the bottom of each email.: PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. does indeed work, and I'll explain how. You are plotting the values of data$one against the _values_ of data$two (see point 3 of my response). In this case, the values of data$two are of class factor, which means that they have numeric values attached to the levels (a, b) of the factor. When you pass these values as the col argument, they are silently converted to their numeric values (1,2,2). In the default palette, these numbers represent the colors - black, red, red. Those are the colors in which the points are plotted. So far, so good. Let's look at the other two points that I guessed. 1) The column names of data2 are not numbers colnames(data) [1] one two As you can see, the column names are character variables, and they don't translate to numbers: as.numeric(colnames(data)) [1] NA NA 2) The number of columns in data2 is not equal to the number of values in data1 that you are plotting It's pretty obvious that there are two values in the column names and three in the vector of values that you are plotting in your example.So, I think I got three out of three without knowing what the data were. Jim On Fri, Jul 24, 2015 at 7:53 PM, jpara3 j.para.fernan...@hotmail.com wrote: I have done a trial with a dataframe like this: one-c(3,2,2) two-c(a,b,b) data-dataframe(uno,dos) plot(data$one,col=data$two) and it plots perfect. If you paste the code above in R, it has errors and does NOT plot perfectly. I still did not understand what you were trying to do. You owe Jim big time. If I try it with the code that i have post in the first message, selecting data1 and data2 as i nthis example, the plot is plotted, but all dots with the same color. Thanks for the answer but noone of the 3 topics is the root problem. -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297p4710300.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI plot by color
Hi, I want to do a plot from a variable (which i select from a listbox) with the color factor of the variable that i have selected from another listbox. To be not very heavy pasting all the code, i will only paste real important parts: data1 and data2 are the extacted parts of the dataframes data from a tcltk listbox: data1- dataframe[as.numeric(tkcurselection(tl))+1] data2- dataframe[as.numeric(tkcurselection(tl))+1] As i want to plot the data1 with the color of data2, i use this code: plot(data1,col=colnames(data2)) This works perfect for plotting the data1 variable, but it do not change the col of the dots by data2. I also have probed with plot(data1,col=factor(colnames(data2))) But nothing happens with the color. Thanks!! -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI plot by color
Hi jpara3, Hmmm. It's becoming clearer, yes I think the answer is emerging from the swirling clouds of uncertainty. 1) The column names of data2 are not numbers 2) The number of columns in data2 is not equal to the number of values in data1 that you are plotting 3) You probably want to plot colors determined by the values in data2, not the names of its columns Please send payment for this psychic reading to Jim On Fri, Jul 24, 2015 at 6:43 PM, jpara3 j.para.fernan...@hotmail.com wrote: Hi, I want to do a plot from a variable (which i select from a listbox) with the color factor of the variable that i have selected from another listbox. To be not very heavy pasting all the code, i will only paste real important parts: data1 and data2 are the extacted parts of the dataframes data from a tcltk listbox: data1- dataframe[as.numeric(tkcurselection(tl))+1] data2- dataframe[as.numeric(tkcurselection(tl))+1] As i want to plot the data1 with the color of data2, i use this code: plot(data1,col=colnames(data2)) This works perfect for plotting the data1 variable, but it do not change the col of the dots by data2. I also have probed with plot(data1,col=factor(colnames(data2))) But nothing happens with the color. Thanks!! -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI plot by color
I have done a trial with a dataframe like this: one-c(3,2,2) two-c(a,b,b) data-dataframe(uno,dos) plot(data$one,col=data$two) and it plots perfect. If I try it with the code that i have post in the first message, selecting data1 and data2 as i nthis example, the plot is plotted, but all dots with the same color. Thanks for the answer but noone of the 3 topics is the root problem. -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297p4710300.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI plot by color
Hi jpara3, Your example, when I got it to go: one-c(3,2,2) two-c(a,b,b) data-dataframe(one,two) plot(data$one,col=data$two) does indeed work, and I'll explain how. You are plotting the values of data$one against the _values_ of data$two (see point 3 of my response). In this case, the values of data$two are of class factor, which means that they have numeric values attached to the levels (a, b) of the factor. When you pass these values as the col argument, they are silently converted to their numeric values (1,2,2). In the default palette, these numbers represent the colors - black, red, red. Those are the colors in which the points are plotted. So far, so good. Let's look at the other two points that I guessed. 1) The column names of data2 are not numbers colnames(data) [1] one two As you can see, the column names are character variables, and they don't translate to numbers: as.numeric(colnames(data)) [1] NA NA 2) The number of columns in data2 is not equal to the number of values in data1 that you are plotting It's pretty obvious that there are two values in the column names and three in the vector of values that you are plotting in your example.So, I think I got three out of three without knowing what the data were. Jim On Fri, Jul 24, 2015 at 7:53 PM, jpara3 j.para.fernan...@hotmail.com wrote: I have done a trial with a dataframe like this: one-c(3,2,2) two-c(a,b,b) data-dataframe(uno,dos) plot(data$one,col=data$two) and it plots perfect. If I try it with the code that i have post in the first message, selecting data1 and data2 as i nthis example, the plot is plotted, but all dots with the same color. Thanks for the answer but noone of the 3 topics is the root problem. -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297p4710300.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI plot by color
Yes, you were right!! Thanks. -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-plot-by-color-tp4710297p4710320.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI tklistbox get value
Thanks mr FOX, now it works perfect!!! -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-tklistbox-get-value-tp4710064p4710123.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI tklistbox get value
Hi, i have a dataframe, dat, with 2 variables, one and two.
I want to print in R the mean of the selected variable of the dataframe. You
can select it with a tklistbox, but when you click OK button, the mean is
not displayed, just NA
one-c(5,5,6,9,5,8)
two-c(12,13,14,12,14,12)
dat-data.frame(uno,dos)
require(tcltk)
tt-tktoplevel()
tl-tklistbox(tt,height=4,selectmode=single)
tkgrid(tklabel(tt,text=Selecciona la variable para calcular media))
tkgrid(tl)
for (i in (1:4))
{
tkinsert(tl,end,colnames(dat[i]))
}
OnOK - function()
{
selecvar - dat[as.numeric(tkcurselection(tl))+1]
print(mean(selecvar))
}
OK.but -tkbutton(tt,text= OK ,command=OnOK)
tkgrid(OK.but)
tkfocus(tt)
#
Can someone please help me?? Thanks!!!
--
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http://r.789695.n4.nabble.com/R-GUI-tklistbox-get-value-tp4710064.html
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Re: [R] R GUI tklistbox get value
Dear j.para.fernandez,
Try
selecvar - dat[, as.numeric(tkcurselection(tl))+1]
Omitting the comma returns a one-column data frame, not a numeric vector.
I hope this helps,
John
John Fox, Professor
McMaster University
Hamilton, Ontario, Canada
http://socserv.mcmaster.ca/jfox/
On Mon, 20 Jul 2015 03:29:07 -0700 (PDT)
jpara3 j.para.fernan...@hotmail.com wrote:
Hi, i have a dataframe, dat, with 2 variables, one and two.
I want to print in R the mean of the selected variable of the dataframe. You
can select it with a tklistbox, but when you click OK button, the mean is
not displayed, just NA
one-c(5,5,6,9,5,8)
two-c(12,13,14,12,14,12)
dat-data.frame(uno,dos)
require(tcltk)
tt-tktoplevel()
tl-tklistbox(tt,height=4,selectmode=single)
tkgrid(tklabel(tt,text=Selecciona la variable para calcular media))
tkgrid(tl)
for (i in (1:4))
{
tkinsert(tl,end,colnames(dat[i]))
}
OnOK - function()
{
selecvar - dat[as.numeric(tkcurselection(tl))+1]
print(mean(selecvar))
}
OK.but -tkbutton(tt,text= OK ,command=OnOK)
tkgrid(OK.but)
tkfocus(tt)
#
Can someone please help me?? Thanks!!!
--
View this message in context:
http://r.789695.n4.nabble.com/R-GUI-tklistbox-get-value-tp4710064.html
Sent from the R help mailing list archive at Nabble.com.
__
R-help@r-project.org mailing list -- To UNSUBSCRIBE and more, see
https://stat.ethz.ch/mailman/listinfo/r-help
PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
__
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
[R] R] R GUI for undergraduate lab class?
Hi Louise:
Pasted below is a section from a syllabus where I list a set of Tegrity-based
URLs that demonstrate the R Commander Graphical User Interface, for R-based
analyses and graphics.
The videos are all about 1 hour in length but there is a slider at the bottom
so it is fairly easy to move past course specific sections or other portions
that you may not need to review.
Comment: Students in this class have no prior experience with R and minimal,
if any, experience with syntax. I try to start them out with R Commander since
it is a fairly easy to use R GUI. In time I move them over to R Studio and
near the end of the term they use an ASCII editor to construct their own
syntax, bypassing R Commander and R Studio. Some students take to this easily
and others prefer the GUI approach.
Comment: The Tegrity videos then to show best using IE and Chrome.
Best wishes.
Tom MacFarland
\begin{longtable}{ l || p{0.10in} p{4.75in} }
\multicolumn{3}{ c }{
\textbf{Weekly Instruction}} \\
\\
\hline
\\
{\bf Week 00} Module 00 -- Video Overview of Biostatistics (DEP 5001),
\url{https://tegr.it/y/1bv3i} 1:14:26 Hrs\\
\\[-0.10in]
{\bf Week 01} Module 01 -- Overview of Biostatistics (DEP 5001),
\url{https://tegr.it/y/1bv3z} 1:26:50 Hrs\\
\\[-0.10in]
Review the syllabus \\
\\[-0.10in]
Use of the Blackboard Course Management System (CMS) \\
\\[-0.10in]
Alternates for communication and instruction (e.g., online
equivalent of a fire drill) \\
\\[-0.10in]
{\bf Week 02} Module 02 -- Introduction: Biostatistics and R,
\url{https://tegr.it/y/1bvmt} 0:57:37 Hrs\\
\\[-0.10in]
{\bf Week 03} Module 03 -- Data in the Large, \url{https://tegr.it/y/1bvmq}
0:47:31 Hrs\\
\\[-0.10in]
{\bf Week 04} Module 04 -- Population, Normal Distribution, and Sampling,
\url{https://tegr.it/y/1bvmn} 0:52:14 Hrs and \url{https://tegr.it/y/1c1tj}
1:02:24 Hrs \\
\\[-0.10in]
{\bf Week 05} Module 05 -- R Graphical User Interface (R Commander, R-GUI)
and R Command Line Interface (R Syntax, R-CLI), \url{https://tegr.it/y/1bvmk}
0:46:54 Hrs\\
\\[-0.10in]
{\bf Week 06} Module 06 -- Data Exploration, Descriptive Statistics, and
Measures of Central Tendency, \url{https://tegr.it/y/1bvmh} 0:55:37 Hrs\\
\\[-0.10in]
{\bf Week 07} Module 07 -- Student's t-Test for Independent Samples,
\url{https://tegr.it/y/1bvme} 1:09:43 Hrs\\
\\[-0.10in]
{\bf Week 08} Module 08 -- Student's t-Test for Matched Pairs,
\url{https://tegr.it/y/1bvmb} 0:36:05 Hrs\\
\\[-0.10in]
{\bf Week 09} Module 09 -- Analyses and Graphics for a Large Dataset With
No Missing Data, \url{https://tegr.it/y/1bvm8} 0:19:36 Hrs\\
\\[-0.10in]
{\bf Week 10} Module 10 -- Analyses and Graphics for a Large Dataset With
Missing Data, \url{https://tegr.it/y/1bvm5} 0:45:51 Hrs\\
\\[-0.10in]
{\bf Week 11} Module 11 -- Oneway Analysis of Variance (ANOVA),
\url{https://tegr.it/y/1bvm2} 1:00:34 Hrs\\
\\[-0.10in]
{\bf Week 12} Module 12 -- Twoway Analysis of Variance (ANOVA),
\url{https://tegr.it/y/1btlg} 1:05:55 Hrs\\
\\[-0.10in]
{\bf Week 13} Module 13 -- Correlation and Linear Regression,
\url{https://tegr.it/y/1bvly} 0:56:30 Hrs\\
\\[-0.10in]
{\bf Week 14} Module 14 -- Future Actions and Next Steps,
\url{https://tegr.it/y/1bvlv} 0:33:38 Hrs\\
\\[-0.10in]
{\bf Week 15} Review and Completion of All Assignments \\
\\[-0.10in]
{\bf Week 16} Review and Completion of All Assignments \\
\\[-0.10in]
Conclusions \\
\\[-0.10in]
\hline
\\[-0.10in]
\end{longtable}
Date: Sat, 12 Jul 2014 13:47:08 -0700
From: Louise Stevenson louise.steven...@lifesci.ucsb.edu
To: r-help@r-project.org
Subject: [R] R GUI for undergraduate lab class?
Message-ID: 41a24965-d53d-4bef-916b-431e18086...@lifesci.ucsb.edu
Content-Type: text/plain; CHARSET=US-ASCII
Hi,
I'm working on a new set of simple, ecological modeling exercises for our
campus' undergraduate Introductory Biology lab series. The students work
with simple population models by looking at graphs and seeing how changing
parameter values and initial population sizes changes how the populations
Re: [R] R GUI for undergraduate lab class?
Ranjan Maitra maitra.mbox.ignored at inbox.com writes: Hi Louise, The INZight GUI might give students something to work with. https://www.stat.auckland.ac.nz/~wild/iNZight/ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI for undergraduate lab class?
The best GUI I know for such purposes is John Fox 's Rcmdr package. It was built for undergraduate courses. Cheers, Christoph Von Samsung Mobile gesendet Ursprüngliche Nachricht Von: Louise Stevenson louise.steven...@lifesci.ucsb.edu Datum: 12.07.2014 22:47 (GMT+01:00) An: r-help@r-project.org Betreff: [R] R GUI for undergraduate lab class? Hi, I'm working on a new set of simple, ecological modeling exercises for our campus' undergraduate Introductory Biology lab series. The students work with simple population models by looking at graphs and seeing how changing parameter values and initial population sizes changes how the populations fluctuate through time. Does anyone know of an existing R GUI or any other interface that would be good for an undergraduate setting? Basically I want something that shows the students the model's output as graphs and lets them change parameter values but the equations/coding itself is hidden such that they can't change any of that. I want what Populus can do (a fantastic program written for this exact purpose, info here: http://www.cbs.umn.edu/research/resources/populus) but I want to be able to upload data so the students can compare model outputs to real data and I can't figure out how to get Populus to plot data. Any help would be very much appreciated! Thank you! Sincerely, Louise Stevenson Graduate Student, University of California, Santa Barbara Department of Ecology, Evolution and Marine Biology __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI for undergraduate lab class?
Hi, I'm working on a new set of simple, ecological modeling exercises for our campus' undergraduate Introductory Biology lab series. The students work with simple population models by looking at graphs and seeing how changing parameter values and initial population sizes changes how the populations fluctuate through time. Does anyone know of an existing R GUI or any other interface that would be good for an undergraduate setting? Basically I want something that shows the students the model's output as graphs and lets them change parameter values but the equations/coding itself is hidden such that they can't change any of that. I want what Populus can do (a fantastic program written for this exact purpose, info here: http://www.cbs.umn.edu/research/resources/populus) but I want to be able to upload data so the students can compare model outputs to real data and I can't figure out how to get Populus to plot data. Any help would be very much appreciated! Thank you! Sincerely, Louise Stevenson Graduate Student, University of California, Santa Barbara Department of Ecology, Evolution and Marine Biology __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI for undergraduate lab class?
There are probably several solutions to what you want to do, but you might look at Shiny as one possibility: http://shiny.rstudio.com -Roy M. On Jul 12, 2014, at 1:47 PM, Louise Stevenson louise.steven...@lifesci.ucsb.edu wrote: Hi, I'm working on a new set of simple, ecological modeling exercises for our campus' undergraduate Introductory Biology lab series. The students work with simple population models by looking at graphs and seeing how changing parameter values and initial population sizes changes how the populations fluctuate through time. Does anyone know of an existing R GUI or any other interface that would be good for an undergraduate setting? Basically I want something that shows the students the model's output as graphs and lets them change parameter values but the equations/coding itself is hidden such that they can't change any of that. I want what Populus can do (a fantastic program written for this exact purpose, info here: http://www.cbs.umn.edu/research/resources/populus) but I want to be able to upload data so the students can compare model outputs to real data and I can't figure out how to get Populus to plot data. Any help would be very much appreciated! Thank you! Sincerely, Louise Stevenson Graduate Student, University of California, Santa Barbara Department of Ecology, Evolution and Marine Biology __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. ** The contents of this message do not reflect any position of the U.S. Government or NOAA. ** Roy Mendelssohn Supervisory Operations Research Analyst NOAA/NMFS Environmental Research Division Southwest Fisheries Science Center 1352 Lighthouse Avenue Pacific Grove, CA 93950-2097 e-mail: roy.mendelss...@noaa.gov (Note new e-mail address) voice: (831)-648-9029 fax: (831)-648-8440 www: http://www.pfeg.noaa.gov/ Old age and treachery will overcome youth and skill. From those who have been given much, much will be expected the arc of the moral universe is long, but it bends toward justice -MLK Jr. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI for undergraduate lab class?
I recommend RExcel. RExcel is an add-in for Windows Excel that gives complete access to the entirety of R from Windows Excel. It is free for educational use. The program by Erich Neuwirth is at http://rcom.univie.ac.at Our book, designed as a supplement to any text, is at http://www.springer.com/978-1-4419-0051-7 Rich On Sat, Jul 12, 2014 at 4:47 PM, Louise Stevenson louise.steven...@lifesci.ucsb.edu wrote: Hi, I'm working on a new set of simple, ecological modeling exercises for our campus' undergraduate Introductory Biology lab series. The students work with simple population models by looking at graphs and seeing how changing parameter values and initial population sizes changes how the populations fluctuate through time. Does anyone know of an existing R GUI or any other interface that would be good for an undergraduate setting? Basically I want something that shows the students the model's output as graphs and lets them change parameter values but the equations/coding itself is hidden such that they can't change any of that. I want what Populus can do (a fantastic program written for this exact purpose, info here: http://www.cbs.umn.edu/research/resources/populus) but I want to be able to upload data so the students can compare model outputs to real data and I can't figure out how to get Populus to plot data. Any help would be very much appreciated! Thank you! Sincerely, Louise Stevenson Graduate Student, University of California, Santa Barbara Department of Ecology, Evolution and Marine Biology __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI for undergraduate lab class?
Hi Louise, I tried using Deducer (graphical frontend to R) in my introductory class (Stat 105 at Iowa State University) for civil and construction engineers and this was a roaring success this year. The class itself has a wee bit of software experience, which has previously been done using JMP. Most instructors (graduate TAs, typically) haven't particularly been enamoured of using JMP, so I decided to explore the possibility of using a GUI version of R. I am not in general a great fan of any kind of GUI for my own work: however, it makes sense for this kind of class and I wanted a one-click solution for the Windoze user which would make it possible for them to use R with minimal typing. (Windoze users are primarily what made up the students in this this class.) I looked at a few R packages: pmg (or Poor Man's GUI, which appeared to not have been updated since 2009, so I am not sure how active this project currently is) and Rcmdr (R commander). Both these packages served my purpose for a limited amount, but were not able to do all the aspects of regression needed in the class (in pmg's case, could not calculate the residuals, but in the case of RCmdr's case, could not provide a residuals plot without the entire plethora of diagnostics also showing up) so I decided to look at other alternatives. Also, installing Rcmdr (with its dependencies) was not particularly easy from the student's perspective (in my view). I found my solution in Deducer which actually has its own website: www.deducer.org. For Windoze users, it is a one-click installation. The beauty of this software, in my mind, is that it can do a lot of things (including quite involved calculations) and has its entire suite of graphics built on the ggplot package. Being a GUI, one has to look around for how to do particular things (which may not always be in the place that I might thing is intuitive, but it is there). The manual is generally decent: however, the graphics part of the manual is perfunctory at best. And it uses Java, a resource hog I generally abhor. I sent the students the e-mail (below) on how to install (and come prepared for the class last week so that we could do a demo and examples). They did not have much issues. In fact, in class, I got exactly one complaint: Can't all this be done in excel? -- I completed this question for him: ... and also on pen and paper -- but other than that, most students have taken to it and turned in their homeworks without much fuss. In fact, some have liked it and explored with it. In our introductory classes, we have typically used JMP. But if some of us prefer using an open-source option that is not encumbered by patents and proprietary licenses but have been bothered by R's learning curve, using it through Deducer might be a possible option. Btw, here is the e-mail I sent my class on how to go about installing Deducer (note that the instructions are from late January): Dear students, For Stat 105, we will be demonstrating Deducer which is available at http://www.deducer.orgfor installation. Deducer is a graphical frontend to the statistical software R. If you are installing to Windows, please use: http://neolab.stat.ucla.edu/cranstats/Deducer-R-2.15.0-win.exe This will install all you need in a one-click operation.For other OS's, please use: http://www.deducer.org/pmwiki/index.php?n=Main.MacOSXInstallation for MacOSX while for Linux, please use: http://www.deducer.org/pmwiki/index.php?n=Main.LinuxInstallation For both Mac and Linux, you will need to install R prior to instaling Deducer and JGR. We will go through a demonstration of Chapter 4 using Deducer in class tomorrow. I hope that this helps! Many thanks and best wishes, Ranjan On Sat, 12 Jul 2014 13:47:08 -0700 Louise Stevenson louise.steven...@lifesci.ucsb.edu wrote: Hi, I'm working on a new set of simple, ecological modeling exercises for our campus' undergraduate Introductory Biology lab series. The students work with simple population models by looking at graphs and seeing how changing parameter values and initial population sizes changes how the populations fluctuate through time. Does anyone know of an existing R GUI or any other interface that would be good for an undergraduate setting? Basically I want something that shows the students the model's output as graphs and lets them change parameter values but the equations/coding itself is hidden such that they can't change any of that. I want what Populus can do (a fantastic program written for this exact purpose, info here: http://www.cbs.umn.edu/research/resources/populus) but I want to be able to upload data so the students can compare model outputs to real data and I can't figure out how to get Populus to plot data. Any help would be very much appreciated! Thank you! Sincerely, Louise Stevenson Graduate Student, University of California, Santa Barbara Department of Ecology, Evolution and Marine Biology
Re: [R] R GUI frond has stopped working
downloaded 435 Kb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/snow_0.3-10.zip' Content type 'application/zip' length 65961 bytes (64 Kb) opened URL downloaded 64 Kb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/RUnit_0.4.26.zip' Content type 'application/zip' length 195724 bytes (191 Kb) opened URL downloaded 191 Kb trying URL 'http://bioconductor.org/packages/2.11/bioc/bin/windows/contrib/2.15/xcms_1. 34.0.zip' Content type 'application/zip' length 1871439 bytes (1.8 Mb) opened URL downloaded 1.8 Mb package 'BiocGenerics' successfully unpacked and MD5 sums checked package 'Rcpp' successfully unpacked and MD5 sums checked package 'Biobase' successfully unpacked and MD5 sums checked package 'waveslim' successfully unpacked and MD5 sums checked package 'mzR' successfully unpacked and MD5 sums checked package 'faahKO' successfully unpacked and MD5 sums checked package 'msdata' successfully unpacked and MD5 sums checked package 'ncdf' successfully unpacked and MD5 sums checked package 'multtest' successfully unpacked and MD5 sums checked package 'rgl' successfully unpacked and MD5 sums checked package 'MassSpecWavelet' successfully unpacked and MD5 sums checked package 'RANN' successfully unpacked and MD5 sums checked package 'snow' successfully unpacked and MD5 sums checked package 'RUnit' successfully unpacked and MD5 sums checked package 'xcms' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\Philippos\AppData\Local\Temp\RtmpW2o83w\downloaded_packages Warning message: installed directory not writable, cannot update packages 'KernSmooth', 'survival' Apologies if I was doing any silly mistakes Filippos -Original Message- From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de] Sent: 09 March 2013 15:14 To: lefelit Cc: 'PIKAL Petr'; r-help@r-project.org Subject: Re: [R] R GUI frond has stopped working On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible
Re: [R] R GUI frond has stopped working
bytes (15.8 Mb) opened URL downloaded 15.8 Mb trying URL 'http://bioconductor.org/packages/2.11/data/experiment/bin/windows/contrib/2 .15/msdata_0.1.12.zip' Content type 'application/zip' length 13742308 bytes (13.1 Mb) opened URL downloaded 13.1 Mb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/ncdf_1.6.6.zip' Content type 'application/zip' length 331657 bytes (323 Kb) opened URL downloaded 323 Kb trying URL 'http://bioconductor.org/packages/2.11/bioc/bin/windows/contrib/2.15/multtes t_2.14.0.zip' Content type 'application/zip' length 1512257 bytes (1.4 Mb) opened URL downloaded 1.4 Mb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/rgl_0.93.928.zip' Content type 'application/zip' length 1978923 bytes (1.9 Mb) opened URL downloaded 1.9 Mb trying URL 'http://bioconductor.org/packages/2.11/bioc/bin/windows/contrib/2.15/MassSpe cWavelet_1.24.0.zip' Content type 'application/zip' length 1190983 bytes (1.1 Mb) opened URL downloaded 1.1 Mb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/RANN_2.2.1.zip' Content type 'application/zip' length 445857 bytes (435 Kb) opened URL downloaded 435 Kb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/snow_0.3-10.zip' Content type 'application/zip' length 65961 bytes (64 Kb) opened URL downloaded 64 Kb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/RUnit_0.4.26.zip' Content type 'application/zip' length 195724 bytes (191 Kb) opened URL downloaded 191 Kb trying URL 'http://bioconductor.org/packages/2.11/bioc/bin/windows/contrib/2.15/xcms_1. 34.0.zip' Content type 'application/zip' length 1871439 bytes (1.8 Mb) opened URL downloaded 1.8 Mb package 'BiocGenerics' successfully unpacked and MD5 sums checked package 'Rcpp' successfully unpacked and MD5 sums checked package 'Biobase' successfully unpacked and MD5 sums checked package 'waveslim' successfully unpacked and MD5 sums checked package 'mzR' successfully unpacked and MD5 sums checked package 'faahKO' successfully unpacked and MD5 sums checked package 'msdata' successfully unpacked and MD5 sums checked package 'ncdf' successfully unpacked and MD5 sums checked package 'multtest' successfully unpacked and MD5 sums checked package 'rgl' successfully unpacked and MD5 sums checked package 'MassSpecWavelet' successfully unpacked and MD5 sums checked package 'RANN' successfully unpacked and MD5 sums checked package 'snow' successfully unpacked and MD5 sums checked package 'RUnit' successfully unpacked and MD5 sums checked package 'xcms' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\Philippos\AppData\Local\Temp\RtmpW2o83w\downloaded_packages Warning message: installed directory not writable, cannot update packages 'KernSmooth', 'survival' Apologies if I was doing any silly mistakes Filippos -Original Message- From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de] Sent: 09 March 2013 15:14 To: lefelit Cc: 'PIKAL Petr'; r-help@r-project.org Subject: Re: [R] R GUI frond has stopped working On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r
Re: [R] R GUI frond has stopped working
On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI frond has stopped working
' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\Philippos\AppData\Local\Temp\RtmpW2o83w\downloaded_packages Warning message: installed directory not writable, cannot update packages 'KernSmooth', 'survival' Apologies if I was doing any silly mistakes Filippos -Original Message- From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de] Sent: 09 March 2013 15:14 To: lefelit Cc: 'PIKAL Petr'; r-help@r-project.org Subject: Re: [R] R GUI frond has stopped working On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI frond has stopped working
update packages 'KernSmooth', 'survival' Apologies if I was doing any silly mistakes Filippos -Original Message- From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de] Sent: 09 March 2013 15:14 To: lefelit Cc: 'PIKAL Petr'; r-help@r-project.org Subject: Re: [R] R GUI frond has stopped working On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI frond has stopped working
) opened URL downloaded 64 Kb trying URL 'http://cran.fhcrc.org/bin/windows/contrib/2.15/RUnit_0.4.26.zip' Content type 'application/zip' length 195724 bytes (191 Kb) opened URL downloaded 191 Kb trying URL 'http://bioconductor.org/packages/2.11/bioc/bin/windows/contrib/2.15/xcms_1. 34.0.zip' Content type 'application/zip' length 1871439 bytes (1.8 Mb) opened URL downloaded 1.8 Mb package 'BiocGenerics' successfully unpacked and MD5 sums checked package 'Rcpp' successfully unpacked and MD5 sums checked package 'Biobase' successfully unpacked and MD5 sums checked package 'waveslim' successfully unpacked and MD5 sums checked package 'mzR' successfully unpacked and MD5 sums checked package 'faahKO' successfully unpacked and MD5 sums checked package 'msdata' successfully unpacked and MD5 sums checked package 'ncdf' successfully unpacked and MD5 sums checked package 'multtest' successfully unpacked and MD5 sums checked package 'rgl' successfully unpacked and MD5 sums checked package 'MassSpecWavelet' successfully unpacked and MD5 sums checked package 'RANN' successfully unpacked and MD5 sums checked package 'snow' successfully unpacked and MD5 sums checked package 'RUnit' successfully unpacked and MD5 sums checked package 'xcms' successfully unpacked and MD5 sums checked The downloaded binary packages are in C:\Users\Philippos\AppData\Local\Temp\RtmpW2o83w\downloaded_packages Warning message: installed directory not writable, cannot update packages 'KernSmooth', 'survival' Apologies if I was doing any silly mistakes Filippos -Original Message- From: Uwe Ligges [mailto:lig...@statistik.tu-dortmund.de] Sent: 09 March 2013 15:14 To: lefelit Cc: 'PIKAL Petr'; r-help@r-project.org Subject: Re: [R] R GUI frond has stopped working On 09.03.2013 00:53, lefelit wrote: Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Not let me update means either you have not had the required permissions for the file access or you had the packages already loaded, so R could not remove them. Uwe Ligges Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI frond has stopped working
Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI frond has stopped working
Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI frond has stopped working
Hi I found the source of the problem. The R would not let me update the survival and KernSmooth package at the R/library folder. I manually delete them and then download the latest version of them to proceed with the xcms installation. I work on a window 7 computer and R 2.15.3/2/1 (all version gave the same error). Hope this provides more information about the problem Regards Filippos -Original Message- From: PIKAL Petr [mailto:petr.pi...@precheza.cz] Sent: 08 March 2013 15:18 To: lefelit; r-help@r-project.org Subject: RE: [R] R GUI frond has stopped working Hi Some issues: 1 do not use HTML mail 2 what OS 3 which R version 4 when and how it stopped working - exact error message (if any) 5 did you ask xcms maintainer for help? (it is not in standard CRAN packages) 6 try to send reproducible example for others to enable them to test the problem Regards Petr -Original Message- From: r-help-boun...@r-project.org [mailto:r-help-bounces@r- project.org] On Behalf Of lefelit Sent: Friday, March 08, 2013 10:58 AM To: r-help@r-project.org Subject: [R] R GUI frond has stopped working Hi I have sent couple of days ago an email describing an issue in regards to R software when I use the xcms package. I haven't got any response whether my post has been made public to receive any help for other users. Is my email again treated as spam or considered as inappropriate to be published? Kind regards Filippos [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting- guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R Gui frond has stopped working
I use R (2.15.2) on a windows 7 (64) for data mining with xcms package. This is a routine process for me and didn't encount any problems until few weeks ago when I got an error message for R GUI frond end has stopped working. The following information was given by windows to describe the error. \AppData\Local\Temp\WER5936.tmp.WERInternalMetadata.xml \AppData\Local\Temp\WER7243.tmp.appcompat.txt \AppData\Local\Temp\WER7282.tmp.mdmp I have uninstall and re-install couple of time the R software but it did not help. Any ideas how to resolve this issue? I even tried to upgrade to 2.15.3 or to 2.15.1 but still get the same error message Thanks in advance for any help [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R-GUI shutdown
On 27.06.2011 23:54, xin123620 wrote: Dear R Users, I was using R to import several years traffic data, but every time after data successfully imported (no error or warning) when I tried to save this workplace or tackle these data, R GUI would automatically shut down. Would you have any ideas that how I should deal with this situation? Thank you very much. - If this is not R-patched with updated package, update - Try to make it reproducible and give us the relevant info so that we can reproduce. - Tell what sessionInfo() says directly before you manage to crash R. Uwe Ligges Best, Chengxin -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-shutdown-tp3628965p3628965.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R-GUI shutdown
Dear R Users, I was using R to import several years traffic data, but every time after data successfully imported (no error or warning) when I tried to save this workplace or tackle these data, R GUI would automatically shut down. Would you have any ideas that how I should deal with this situation? Thank you very much. Best, Chengxin -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-shutdown-tp3628965p3628965.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui on windows how to force to always show the last line of output
thank you, David, for your answer, which has a therapeutic effect. Otherwise i was launching my prod code from Emacs ESS jas as Janice suggested. On Sat, Apr 2, 2011 at 2:27 PM, David Winsemius dwinsem...@comcast.net wrote: On Apr 2, 2011, at 4:21 AM, stan zimine wrote: Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. You may want to add flush.console() to the code. -- David Winsemius, MD West Hartford, CT __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui on windows how to force to always show the last line of output
CTRL+L helps. 2011/4/2 stan zimine szim...@gmail.com Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. SZ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui on windows how to force to always show the last line of output
i wonder why you want to change R but not your program itself, you just print the last sentence is ok? wuleiwong statistic@CSU On 03-Apr-2011 9:06 PM, lcn lcn...@gmail.com wrote: CTRL+L helps. 2011/4/2 stan zimine szim...@gmail.com Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. SZ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R gui on windows how to force to always show the last line of output
Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. SZ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui on windows how to force to always show the last line of output
If I were you, I would use another GUI. The standart GUI (to mee) seems to be very basic and lacks many handy features (e.g. autosave etc). I am not sure which GUI does what you want, but just try a few (list is sorted from intuitive to more complicated): -RStudio (still in Beta but very nive) -TinnR -Rkward -Emacs -ESS (I am quite sure that this one does what you want) -Eclipse - StatET Just try a few Jannis On 04/02/2011 10:21 AM, stan zimine wrote: Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. SZ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui on windows how to force to always show the last line of output
On Apr 2, 2011, at 4:21 AM, stan zimine wrote: Hi. Googled but did not found the answer for the following little issue. how to force R gui on windows (maybe a specific setting) to always show the last line of output in the window console. My program in R makes measurements every 5 mins in indefinite loop and prints results in the console. The problem: last messages are not visible, The scrolling bar of the gui console gets shorter. I.e. you have to scroll for the last messages. Thanks if anybody knows the sol to this prob. You may want to add flush.console() to the code. -- David Winsemius, MD West Hartford, CT __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R gui problem for windows
Dear R, I rare use the standard R-gui on Windows. Yesterday I tried the latest stable release on Windows 7 and XP and found one thing interesting. Assume currently I am running R code, say example(plot) Then I click the close window button on the R main window. R asks me to save workspace image or not. Then I click cancel. I suspect that my program example(plot) should continue but it is interrupted eventually. I would like to know the mechanism behind this and wonder whether this can be improved or not. It is a minor problem but I believe it can be very convenient for the window users especially when they are running time consuming simulations. What do you think? Best, Feng -- Feng Li Department of Statistics Stockholm University 106 91 Stockholm, Sweden http://feng.li/ [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui problem for windows
On Wed, 23 Mar 2011, Feng Li wrote: Dear R, I rare use the standard R-gui on Windows. Yesterday I tried the latest stable release on Windows 7 and XP and found one thing interesting. Assume You were asked in the posting guide (which clearly you have ignored as you sent HTML) to be accurate about your version information. We don't describe any version as 'latest stable'. currently I am running R code, say example(plot) Then I click the close window button on the R main window. R asks me to save workspace image or not. Then I click cancel. I suspect that my program example(plot) should continue but it is interrupted eventually. I would like to know the mechanism behind this and wonder whether this can be improved or not. It is a minor problem but I believe it can be very convenient for the window users especially when they are running time consuming simulations. What do you think? How to run batch jobs on Windows is documented in the rw-FAQ (which the posting guide pointed you to). Rgui (sic) is not intended for batch jobs, and like all other Windows GUIs I have ever seen, closing the main windows terminates the process. Best, Feng -- Feng Li Department of Statistics Stockholm University 106 91 Stockholm, Sweden http://feng.li/ [[alternative HTML version deleted]] PLEASE do read the posting guide http://www.R-project.org/posting-guide.html That does mean you -- Brian D. Ripley, rip...@stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UKFax: +44 1865 272595 __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R gui problem for windows
Thank you for spending time to point me to the posting guide. I apology for the unclear statement for the R version. It is 32bit 2.12.2. I love computer programs because I can always undo what I did before. For example I did not intend to close the program but I hit the mouse by mistake. Then I thought the cancel command can help me. And a lot programs have this option, so does R gui for windows. What I found in R gui is that the click even terminates the running task first and then asks for saving image. But if the user regrets what he did, it it too late to go back to the running task. I though maybe it is possible to put a top layer to check if the user clicked cancel, then do nothing, otherwise, do as usual did. I know how to run R in a batched mode and all I said is based on user experience point of view. A good user experience will let more people love R. That is all my concern. Have a good day! Feng On Wed, Mar 23, 2011 at 11:30 AM, Prof Brian Ripley rip...@stats.ox.ac.uk wrote: On Wed, 23 Mar 2011, Feng Li wrote: Dear R, I rare use the standard R-gui on Windows. Yesterday I tried the latest stable release on Windows 7 and XP and found one thing interesting. Assume You were asked in the posting guide (which clearly you have ignored as you sent HTML) to be accurate about your version information. We don't describe any version as 'latest stable'. currently I am running R code, say example(plot) Then I click the close window button on the R main window. R asks me to save workspace image or not. Then I click cancel. I suspect that my program example(plot) should continue but it is interrupted eventually. I would like to know the mechanism behind this and wonder whether this can be improved or not. It is a minor problem but I believe it can be very convenient for the window users especially when they are running time consuming simulations. What do you think? How to run batch jobs on Windows is documented in the rw-FAQ (which the posting guide pointed you to). Rgui (sic) is not intended for batch jobs, and like all other Windows GUIs I have ever seen, closing the main windows terminates the process. Best, Feng -- Feng Li Department of Statistics Stockholm University 106 91 Stockholm, Sweden http://feng.li/ [[alternative HTML version deleted]] PLEASE do read the posting guide http://www.R-project.org/posting-guide.html That does mean you -- Brian D. Ripley, rip...@stats.ox.ac.uk Professor of Applied Statistics, http://www.stats.ox.ac.uk/~ripley/ University of Oxford, Tel: +44 1865 272861 (self) 1 South Parks Road, +44 1865 272866 (PA) Oxford OX1 3TG, UK Fax: +44 1865 272595 -- Feng Li Department of Statistics Stockholm University 106 91 Stockholm, Sweden http://feng.li/ __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI using traitr to display multiple data
Hello to everyone. I am constructing a GUI table using traitr with multiple buttons that respond to different codes. Such as I am doing titration of a protein, and I want the script to run and then the end to be displayed in a window. The window will have a button for data and graphs, where when you click on the data button the data will be displayed and when you click on the graph button the graphs will be displayed. Do you know how to set up different buttons with functions using the traitr GUI for R? Thanks! -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-using-traitr-to-display-multiple-data-tp2225477p2225477.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI using traitr to display multiple data
Amitoj S. Chopra amitojc at gmail.com writes: Hello to everyone. I am constructing a GUI table using traitr with multiple buttons that respond to different codes. Such as I am doing titration of a protein, and I want the script to run and then the end to be displayed in a window. The window will have a button for data and graphs, where when you click on the data button the data will be displayed and when you click on the graph button the graphs will be displayed. Do you know how to set up different buttons with functions using the traitr GUI for R? Thanks! There are two ways. You can use a buttonItem or to add a button to a dialog, just use the buttons property and define a handler. Here are both in an example: dlg - aDialog(items=list(a = buttonItem(click me, show_label=FALSE, action=function(.,...) print(clicked)) ), buttons=c(OK,Cancel,Help,Some other), Someother_handler=function(.) print(some other button)) dlg$make_gui() __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI
Hey do you know a good guide for traitr to learn from? Is this okay? Ive been trying it but it is difficult for me to learn. Thanks. Amitoj http://cran.r-project.org/web/packages/traitr/vignettes/traitr.pdf -- View this message in context: http://r.789695.n4.nabble.com/R-GUI-tp1837662p2068626.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI
I am really new with R Graphical user interfacefunctions. I am developing a software package to calculate pKa (biochemistry) but I want to make it look aesthetically pleasing and make it user friendly. I have heard that R has some GUI (Graphical user interface) and you can do some really cool stuff out there. What are the limitations and what are some resources for help. I have found a couple of sources but I was wondering someone with more experience in the subject can guide me. Thanks! -- View this message in context: http://n4.nabble.com/R-GUI-tp1837662p1837662.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI
I have toyed with 'traitr' recently... It is not fancy, but relatively easy to figure out. -k On Mon, Apr 12, 2010 at 4:00 PM, Amitoj S. Chopra amit...@gmail.com wrote: I am really new with R Graphical user interfacefunctions. I am developing a software package to calculate pKa (biochemistry) but I want to make it look aesthetically pleasing and make it user friendly. I have heard that R has some GUI (Graphical user interface) and you can do some really cool stuff out there. What are the limitations and what are some resources for help. I have found a couple of sources but I was wondering someone with more experience in the subject can guide me. Thanks! -- View this message in context: http://n4.nabble.com/R-GUI-tp1837662p1837662.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI
Dne Po 12. dubna 2010 22:00:21 Amitoj S. Chopra napsal(a): I am really new with R Graphical user interfacefunctions. I am developing a software package to calculate pKa (biochemistry) but I want to make it look aesthetically pleasing and make it user friendly. I have heard that R has some GUI (Graphical user interface) and you can do some really cool stuff out there. What are the limitations and what are some resources for help. I have found a couple of sources but I was wondering someone with more experience in the subject can guide me. Thanks! Hello, especially if You are Linux / Unix user, You can use Rkward GUI (http://rkward.sourceforge.net/). It is written using KDE libraries (http://www.kde.org/) using Nokia Qt (http://qt.nokia.com/) - it is powerful multiplatform developer tool. Tons of programs are written in it. Although I'm not developer, I'd recommend it. Another way is to write it in Java (I do not like the language), which is very popular and nice looking language :-) or in scripting languages lake Python (excellent tool) or Perl, which are usable on all platforms and have a lot of supporting libraries and functions. I hope it helps little bit. :-) Best regards, Vojtěch Zeisek -- Vojtěch Zeisek Komunita openSUSE GNU/Linuxu / Community of the openSUSE GNU/Linux http://www.opensuse.org/ http://web.natur.cuni.cz/~zeisek/ signature.asc Description: This is a digitally signed message part. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI
Hi I like gWidgets, you can choose different api, like rgtk2, tcltkeasy to use in R, looks pretty(at least for me), try the examples in the website first, the link below is the answers with tutorial links, you can also check gWidgets vignette. https://stat.ethz.ch/pipermail/r-sig-gui/2008-August/000831.html Regards Tengfei On Mon, Apr 12, 2010 at 3:00 PM, Amitoj S. Chopra amit...@gmail.com wrote: I am really new with R Graphical user interfacefunctions. I am developing a software package to calculate pKa (biochemistry) but I want to make it look aesthetically pleasing and make it user friendly. I have heard that R has some GUI (Graphical user interface) and you can do some really cool stuff out there. What are the limitations and what are some resources for help. I have found a couple of sources but I was wondering someone with more experience in the subject can guide me. Thanks! -- View this message in context: http://n4.nabble.com/R-GUI-tp1837662p1837662.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Tengfei Yin MCDB PhD student 1620 Howe Hall, 2274, Iowa State University Ames, IA,50011-2274 Homepage: www.tengfei.name English Blog: www.tengfei.name/en Chinese Blog: www.tengfei.name/ch [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI page on the wiki (was: Re: .... running JGR on a Linux/SuSE system)
Hi, I've started the process of moving the page R gui page [1] to the R wiki [2]. The idea is that instead of being Philippe Grosjean's burden to update the static page, it becomes a collaborative exercize. So that it can be more up to date and can also contain things as use case, feature comparison, Can I suggest that you create a page about rkward here: http://wiki.r-project.org/rwiki/doku.php?id=guis:guis:rkward and ess here: http://wiki.r-project.org/rwiki/doku.php?id=guis:guis:ess Romain [1] http://www.sciviews.org/_rgui/ [2] http://wiki.r-project.org/rwiki/doku.php?id=guis:guis On 08/03/2009 10:27 AM, Stefan Grosse wrote: Martin Maechler wrote: But there are quite a few others (I do not really know from personal experience), see, e.g., all the projects (listed on the left hand side) of http://www.r-project.org/GUI I personally can recommend rkward which is now available on many platforms and which is probably a little easier to use than the mighty emacs+ESS. rkward: http://sourceforge.net/apps/mediawiki/rkward/index.php?title=Main_Page Regards Stefan -- Romain Francois Independent R Consultant +33(0) 6 28 91 30 30 http://romainfrancois.blog.free.fr |- http://tr.im/tlNb : RGG#155, 156 and 157 |- http://tr.im/rw0p : useR! slides `- http://tr.im/rw0b : RGG#154: demo of atomic functions __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] [R-gui] Tinn-R/Latex output
Mike Prager wrote:
David Carslaw [EMAIL PROTECTED] wrote:
I find Tinn-R to be an excellent editor for R, but I have one question I
have not been able to answer.
I wish to include some R code in Latex. Using the Edit/Copy formatted
(to export)/TeX does provide Latex-type output. However, there are lots
of commands such as \RAIdentifier and \RAOperator etc. that would appear
to need either a Latex package to interpret or a list of new commands
that describe font attributes etc.
My question is whether such a package exists, or is the user expected to
define their own commands to interpret them?
David,
I also find Tinn-R an excellent editor for R.
When I include R code in Latex, I use the Latex listings
package. It has a wide variety of settings for pretty-printing R
code and can be customized by the user. I think that would be
more satisfactory in the long run than inserting Latex codes (or
having an editor insert Latex codes) to mark R language
elements.
HTH
Mike P.
The following is how I set up the listings package usage for R. If you
have improvements to this please pass them along. -Frank
\usepackage{listings,relsize}
%Setup for listings package
\lstloadlanguages{R}
\lstset{language=R,basicstyle=\smaller[2],commentstyle=\rmfamily\smaller,
showstringspaces=false,%
xleftmargin=4ex,literate={-}{{$\leftarrow$}}1 {~}{{$\sim$}}1}
\lstset{escapeinside={(*}{*)}} % for (*\ref{ }*) inside lstlistings (S
code)
--
Frank E Harrell Jr Professor and Chair School of Medicine
Department of Biostatistics Vanderbilt University
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Re: [R] [R-gui] Tinn-R/Latex output
On Fri, Sep 19, 2008 at 4:05 PM, Frank E Harrell Jr
[EMAIL PROTECTED] wrote:
Mike Prager wrote:
David Carslaw [EMAIL PROTECTED] wrote:
I find Tinn-R to be an excellent editor for R, but I have one question I
have not been able to answer.
I wish to include some R code in Latex. Using the Edit/Copy formatted
(to export)/TeX does provide Latex-type output. However, there are lots
of commands such as \RAIdentifier and \RAOperator etc. that would appear
to need either a Latex package to interpret or a list of new commands
that describe font attributes etc.
My question is whether such a package exists, or is the user expected to
define their own commands to interpret them?
David,
I also find Tinn-R an excellent editor for R.
When I include R code in Latex, I use the Latex listings
package. It has a wide variety of settings for pretty-printing R
code and can be customized by the user. I think that would be
more satisfactory in the long run than inserting Latex codes (or
having an editor insert Latex codes) to mark R language
elements.
HTH
Mike P.
The following is how I set up the listings package usage for R. If you have
improvements to this please pass them along. -Frank
\usepackage{listings,relsize}
%Setup for listings package
\lstloadlanguages{R}
\lstset{language=R,basicstyle=\smaller[2],commentstyle=\rmfamily\smaller,
showstringspaces=false,%
xleftmargin=4ex,literate={-}{{$\leftarrow$}}1 {~}{{$\sim$}}1}
\lstset{escapeinside={(*}{*)}} % for (*\ref{ }*) inside lstlistings (S
code)
I have played around with:
\definecolor{comment}{rgb}{0.60, 0.60, 0.53}
\definecolor{background}{rgb}{0.97, 0.97, 1.00}
\definecolor{string}{rgb}{0.863, 0.066, 0.266}
\definecolor{number}{rgb}{0.0, 0.6, 0.6}
\definecolor{variable}{rgb}{0.00, 0.52, 0.70}
\lstset{
basicstyle=\ttfamily,
keywordstyle=\bfseries,
identifierstyle=,
commentstyle=\color{comment} \itshape,
stringstyle=, %\color{string}
showstringspaces=false,
columns = fullflexible,
backgroundcolor=\color{background},
mathescape = true,
escapeinside=,
fancyvrb
}
Hadley
--
http://had.co.nz/
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PLEASE do read the posting guide http://www.R-project.org/posting-guide.html
and provide commented, minimal, self-contained, reproducible code.
Re: [R] [R-gui] Tinn-R/Latex output
hadley wickham wrote:
On Fri, Sep 19, 2008 at 4:05 PM, Frank E Harrell Jr
[EMAIL PROTECTED] wrote:
Mike Prager wrote:
David Carslaw [EMAIL PROTECTED] wrote:
I find Tinn-R to be an excellent editor for R, but I have one question I
have not been able to answer.
I wish to include some R code in Latex. Using the Edit/Copy formatted
(to export)/TeX does provide Latex-type output. However, there are lots
of commands such as \RAIdentifier and \RAOperator etc. that would appear
to need either a Latex package to interpret or a list of new commands
that describe font attributes etc.
My question is whether such a package exists, or is the user expected to
define their own commands to interpret them?
David,
I also find Tinn-R an excellent editor for R.
When I include R code in Latex, I use the Latex listings
package. It has a wide variety of settings for pretty-printing R
code and can be customized by the user. I think that would be
more satisfactory in the long run than inserting Latex codes (or
having an editor insert Latex codes) to mark R language
elements.
HTH
Mike P.
The following is how I set up the listings package usage for R. If you have
improvements to this please pass them along. -Frank
\usepackage{listings,relsize}
%Setup for listings package
\lstloadlanguages{R}
\lstset{language=R,basicstyle=\smaller[2],commentstyle=\rmfamily\smaller,
showstringspaces=false,%
xleftmargin=4ex,literate={-}{{$\leftarrow$}}1 {~}{{$\sim$}}1}
\lstset{escapeinside={(*}{*)}} % for (*\ref{ }*) inside lstlistings (S
code)
I have played around with:
\definecolor{comment}{rgb}{0.60, 0.60, 0.53}
\definecolor{background}{rgb}{0.97, 0.97, 1.00}
\definecolor{string}{rgb}{0.863, 0.066, 0.266}
\definecolor{number}{rgb}{0.0, 0.6, 0.6}
\definecolor{variable}{rgb}{0.00, 0.52, 0.70}
\lstset{
basicstyle=\ttfamily,
keywordstyle=\bfseries,
identifierstyle=,
commentstyle=\color{comment} \itshape,
stringstyle=, %\color{string}
showstringspaces=false,
columns = fullflexible,
backgroundcolor=\color{background},
mathescape = true,
escapeinside=,
fancyvrb
}
Hadley
Thanks Hadley. Your specificatins generated a couple of syntax errors
for me and typeset the code too large but I'd like to play with it and
I'm glad to have it.
Frank
--
Frank E Harrell Jr Professor and Chair School of Medicine
Department of Biostatistics Vanderbilt University
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[R] R GUI help
Hi R gurus Im currently doing some GUI coding with the rpanel package. I have come across a very interesting problem, how do I close a panel that I have created. This sounds silly for I can always click the X up in the right corner but how do I do it by code? for example; when I create a control I know the objects name. test = rp.control() and test will have this format '.rpanel', but can I call the control ID and close the object? Regards Tom -- View this message in context: http://www.nabble.com/R-GUI-help-tp18729462p18729462.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI question
Thanks so much for all the input; I appreciate it. I think I'll stick with Tcl/Tk for now primarily on the basis of installation issues. I'm not sure that many of these users would have Java, so the other alternatives all seemed to add another level of complexity on to the installation task (again, this is aimed at a very non-computer savvy audience). Thanks again for the advice! Jeff -- View this message in context: http://www.nabble.com/R-GUI-question-tp16149624p16262820.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI question
Hi. I'm looking to create a user-friendly program built around some R methods I've written. The program should be as easy to install and use as possible and will be built around a GUI. This program will be cross-platform; that's crucial. I'm familiar with Java and its GUI packages, I've been looking at the JRI package (interfaces R with Java) but I'm a little uneasy about asking my users to go through its installation (necessitates mingw, among other things, in Windows). Though, once installed, it could work very well. I have a little exposure to Tcl/TK. Though I'm not as big of a fan of this as I am of Java, I could suck it up and use it, but I'm not sure that its installation is a whole lot simpler? What, in your experience, is the easiest way to accomplish something like this? To recapitulate, my criteria are: 1.) Easy installation 2.) Ease of use (GUI) 3.) Interface with functions written in R 4.) Cross-platform I'm willing to learn a new language (scripting or otherwise) if necessary. Thanks so much. -- View this message in context: http://www.nabble.com/R-GUI-question-tp16149624p16149624.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI question
On Wed, Mar 19, 2008 at 12:56:13PM -0700, jeffreya wrote: Hi. I'm looking to create a user-friendly program built around some R methods I've written. The program should be as easy to install and use as possible and will be built around a GUI. This program will be cross-platform; that's crucial. I'm familiar with Java and its GUI packages, I've been looking at the JRI package (interfaces R with Java) but I'm a little uneasy about asking my users to go through its installation (necessitates mingw, among other things, in Windows). Though, once installed, it could work very well. I have a little exposure to Tcl/TK. Though I'm not as big of a fan of this as I am of Java, I could suck it up and use it, but I'm not sure that its installation is a whole lot simpler? Should be. It comes with R. I believe that it is still the only cross-platform solution that requires nothing, but the base R installation. What, in your experience, is the easiest way to accomplish something like this? To recapitulate, my criteria are: 1.) Easy installation Tcl/Tk wins here, IMHO. 2.) Ease of use (GUI) Tcl/Tk is not the most modern GUI, so it might be a little clumsy. 3.) Interface with functions written in R That's no problem for any of the R GUI options, i believe. 4.) Cross-platform Tcl/Tk is. Furthermore, Tcl/Tk is quite poorly documented, even if you can usually use its normal (not R) documentation. Sometimes it is hard to find the right way of doing things. Gabor I'm willing to learn a new language (scripting or otherwise) if necessary. Thanks so much. -- View this message in context: http://www.nabble.com/R-GUI-question-tp16149624p16149624.html Sent from the R help mailing list archive at Nabble.com. __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. -- Csardi Gabor [EMAIL PROTECTED]UNIL DGM __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI question
Look at Rcmdr as the base for your additional menu functions. I am using it for my introductory courses and have added my own menu items. From CRAN, download and install Rcmdr and read it's documentation. Also from CRAN you can download and install my addin library RcmdrPlugin.HH The latter will show how easy it is to add additional functions to the Rcmdr menu. Rich __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
[R] R GUI installation on Linux/SuSE 10.3
After a long sufferance I had succeeded in installing R GUI on my Linux/SuSE system. It worked fine. Unluckily a system upgrade patch messed up my monitor so I had to reinstall SuSE 10.3 and every other application on top of it. I have R running back with text interface. I tried to get the nice R GUI up running again. I followed all the steps to reinstall the R GUI but this time I get a list of errors that I cannot remember seeing on my previous installation. In the following I have pasted the main steps and messages. Any suggestion how to solve this installation problem is welcome. Thank you in advance, Maura [EMAIL PROTECTED]:~ su Password: linux-Ciccia:/home/mauede # R CMD javareconf Updating Java configuration in /usr/local/lib64/R Done. linux-Ciccia:/home/mauede # export LIBXCB_ALLOW_SLOPPY_LOCK=true linux-Ciccia:/home/mauede # R R version 2.6.1 (2007-11-26) install.packages(JGR,dep=TRUE) --- Please select a CRAN mirror for use in this session --- CRAN mirror/usr/local/lib64/R/library * Installing *source* package 'JGR' ... ** R ** inst ** help Building/Updating help pages for package 'JGR' Formats: text html latex example jgr.addMenu texthtmllatex example jgr.addMenuItem texthtmllatex example jgr.addMenuSeperator texthtmllatex example supplements texthtmllatex ** building package indices ... * DONE (JGR) The downloaded packages are in /tmp/RtmpjUwDCp/downloaded_packages Updating HTML index of packages in '.Library' library(JGR) Loading required package: rJava Loading required package: JavaGD Loading required package: iplots libxcb: WARNING! Program tries to unlock a connection without having acquired a lock first, which indicates a programming error. There will be no further warnings about this issue. libxcb: WARNING! Program tries to lock an already locked connection, which indicates a programming error. There will be no further warnings about this issue. Please use the corresponding JGR launcher to start JGR. Run JGR() for details. You can also use JGR(update=TRUE) to update JGR. JGR() Starting JGR run script. This can be done from the shell as well, just run /usr/local/lib64/R/library/JGR/scripts/run Exception in thread main java.lang.NoClassDefFoundError: org/rosuda/JRI/RMainLoopCallbacks at java.lang.ClassLoader.defineClass1(Native Method) at java.lang.ClassLoader.defineClass(ClassLoader.java:620) at java.security.SecureClassLoader.defineClass( SecureClassLoader.java:124) at java.net.URLClassLoader.defineClass(URLClassLoader.java:260) at java.net.URLClassLoader.access$000(URLClassLoader.java:56) at java.net.URLClassLoader$1.run(URLClassLoader.java:195) at java.security.AccessController.doPrivileged(Native Method) at java.net.URLClassLoader.findClass(URLClassLoader.java:188) at RJavaClassLoader.findClass(RJavaClassLoader.java:137) at java.lang.ClassLoader.loadClass(ClassLoader.java:306) at java.lang.ClassLoader.loadClass(ClassLoader.java:251) at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319) at java.lang.Class.getDeclaredMethods0(Native Method) at java.lang.Class.privateGetDeclaredMethods(Class.java:2427) at java.lang.Class.getMethod0(Class.java:2670) at java.lang.Class.getMethod(Class.java:1603) at RJavaClassLoader.bootClass(RJavaClassLoader.java:289) at RJavaClassLoader.main(RJavaClassLoader.java:326) Caused by: java.lang.ClassNotFoundException at RJavaClassLoader.findClass(RJavaClassLoader.java:195) at java.lang.ClassLoader.loadClass(ClassLoader.java:306) at java.lang.ClassLoader.loadClass(ClassLoader.java:251) at java.lang.ClassLoader.loadClassInternal(ClassLoader.java:319) ... 18 more [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
Re: [R] R GUI for Linux
Maura, The workaround from https://bugzilla.novell.com/show_bug.cgi?id=330991 seems to fix this for most people (but not me): just add export LIBXCB_ALLOW_SLOPPY_LOCK=1 to your ~/.profile file (or to /etc/profile to make it available for all users). Ted. Maura E Monville wrote on 11/03/2007 04:35 AM: Thank you . I followed all the path on my installation. I got the following: [EMAIL PROTECTED]:/usr/lib/jvm/java-1.6.0.u3-sun-1.6.0.u3/jre/lib/i386 ll total 636 -rwxr-xr-x 1 root root 80594 2007-09-25 01:10 libjavaplugin_jni.so -rwxr-xr-x 1 root root 297535 2007-09-25 01:10 libjavaplugin_nscp_gcc29.so -rwxr-xr-x 1 root root 257071 2007-09-25 01:10 libjavaplugin_nscp.so I do not have xawt/libmawt.so as you can see from the above. I do not know what that is. I run Linux/SuSE 10.3 On 10/31/07, ecatchpole [EMAIL PROTECTED] wrote: This is a known problem with Suse10.3 --- lots of things that use Java (e.g., Matlab) produce the same error message. I'm currently trying to fix this upon my machine, but haven't succeeded yet. Josh Triplett (http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=6532373) suggested the following: ---begin--- I worked with jcristau and christoph4 via IRC on #debian-x, and we managed to track down the problem with broken locking in Sun Java 1.5 and 1.6. It only occurs if Java finds the Xinerama extension, at which point it does something broken with locking and triggers the assertion. If Java never finds the Xinerama extension, it doesn't trigger the assertion for broken locking. The following workarounds address this problem: For sun-java5-bin: sed -i 's/XINERAMA/FAKEEXTN/g' /usr/lib/jvm/java-1.5.0-sun-1.5.0.11/jre/lib/i386/xawt/libmawt.so ---end--- You need to modify the path for your jre. This seems to have helped several people. But it didn't work for me. A sure fix is going back to Suse10.2! :( Ted. -- Dr E.A. Catchpole Visiting Fellow Univ of New South Wales at ADFA, Canberra, Australia _ and University of Kent, Canterbury, England 'v'- www.pems.adfa.edu.au/~ecatchpolehttp://www.pems.adfa.edu.au/%7Eecatchpole / \ - fax: +61 2 6268 8786 m m- ph: +61 2 6268 8895 Maura E Monville wrote on 11/01/2007 09:43 AM: I have downloaded and tried to install JGR - Java GUI for R - Version 1.5. I followed all the instructions (at least in my best resolution) and installed Java latest version. R installation complete fine. Has anyone succeded in installing JGR on SuSE 10.3 ? In the following I hade detailed the failed installation, As root /i did the following: linux-Mimin:/usr/local/bin # ./R R version 2.6.0 (2007-10-03) Copyright (C) 2007 The R Foundation for Statistical Computing ISBN 3-900051-07-0 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. Natural language support but running in an English locale R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. install.packages (JGR,dep=TRUE) --- Please select a CRAN mirror for use in this session --- CRAN mirror 1: Argentina 2: Australia (QLD) 3: Australia (VIC) 4: Austria 5: Belgium 6: Brazil (PR) 7: Brazil (MG) 8: Brazil (RJ) 9: Brazil (SP 1) 10: Brazil (SP 2) 11: Canada (BC)12: Canada (ON) 13: Chile (Santiago) 14: Croatia 15: Czech Republic 16: Denmark 17: France (Toulouse) 18: France (Lyon) 19: France (Paris) 20: Germany (Bamberg) 21: Germany (Mainz)22: Germany (Muenchen) 23: India (Kolkata)24: India 25: Ireland26: Italy (Ferrara) 27: Italy (Milano) 28: Italy (Padua) 29: Italy (Palermo)30: Japan (Aizu) 31: Japan (Tokyo) 32: Japan (Tsukuba) 33: Korea 34: Netherlands (Amsterdam 2) 35: Netherlands (Amsterdam)36: Netherlands (Utrecht) 37: Norway 38: Poland (Lublin) 39: Poland (Wroclaw) 40: Portugal 41: Slovenia (Ljubljana) 42: South Africa 43: Spain (Madrid) 44: Sweden 45: Switzerland (Zuerich) 46: Switzerland (Bern) 47: Taiwan (Taichung) 48: Taiwan (Taipeh) 49: UK (Bristol) 50: UK (London) 51: USA (CA 1) 52: USA (CA 3) 53: USA (CA 2) 54: USA (IA) 55: USA (IL) 56: USA (MI) 57: USA (MO) 58: USA (NC) 59: USA (PA 2) 60: USA (PA) 61: USA (TX) 62: USA (WA)
Re: [R] R GUI for Linux
This is a reported bug in Suse10.3. It is described in https://bugzilla.novell.com/show_bug.cgi?id=330991, where it is listed as a major, but unresolved, bug. It has been like that for at least a week . . . :( Ted. Dr EA Catchpole Visiting Fellow [EMAIL PROTECTED] and Univ of Kent -Original Message- From: [EMAIL PROTECTED] on behalf of ecatchpole Sent: Thu 2007-11-01 14:48 To: Maura E Monville Cc: [EMAIL PROTECTED] Subject: Re: [R] R GUI for Linux This is a known problem with Suse10.3 --- lots of things that use Java (e.g., Matlab) produce the same error message. I'm currently trying to fix this upon my machine, but haven't succeeded yet. Josh Triplett (http://bugs.sun.com/bugdatabase/view_bug.do?bug_id=6532373) suggested the following: ---begin--- I worked with jcristau and christoph4 via IRC on #debian-x, and we managed to track down the problem with broken locking in Sun Java 1.5 and 1.6. It only occurs if Java finds the Xinerama extension, at which point it does something broken with locking and triggers the assertion. If Java never finds the Xinerama extension, it doesn't trigger the assertion for broken locking. The following workarounds address this problem: For sun-java5-bin: sed -i 's/XINERAMA/FAKEEXTN/g' /usr/lib/jvm/java-1.5.0-sun-1.5.0.11/jre/lib/i386/xawt/libmawt.so ---end--- You need to modify the path for your jre. This seems to have helped several people. But it didn't work for me. A sure fix is going back to Suse10.2! :( Ted. -- Dr E.A. Catchpole Visiting Fellow Univ of New South Wales at ADFA, Canberra, Australia _ and University of Kent, Canterbury, England 'v'- www.pems.adfa.edu.au/~ecatchpole / \ - fax: +61 2 6268 8786 m m- ph: +61 2 6268 8895 Maura E Monville wrote on 11/01/2007 09:43 AM: I have downloaded and tried to install JGR - Java GUI for R - Version 1.5. I followed all the instructions (at least in my best resolution) and installed Java latest version. R installation complete fine. Has anyone succeded in installing JGR on SuSE 10.3 ? In the following I hade detailed the failed installation, snip library(JGR) Loading required package: rJava Loading required package: JavaGD Loading required package: iplots R: xcb_xlib.c:52: xcb_xlib_unlock: Assertion `c-xlib.lock' failed. Aborted Thank you in advance __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code. [[alternative HTML version deleted]] __ R-help@r-project.org mailing list https://stat.ethz.ch/mailman/listinfo/r-help PLEASE do read the posting guide http://www.R-project.org/posting-guide.html and provide commented, minimal, self-contained, reproducible code.
