[Artemis-users] changing nt scale in ACT

Hi is there a way to change the spacing/interval of the nt scale in ACT to some custom value? Thanks Alex ___ Artemis-users mailing list Artemis-users@sanger.ac.uk http://lists.sanger.ac.uk/mailman/listinfo/artemis-users

Re: [Artemis-users] Customizing crunch file in ACT...

Alternatively (as we do it) we generate an EMBL FT track containing the layout of contigs (incl any rev complementing and/or linkers). Works quite well for us and keeps comparison files clean/original. ALex -Oorspronkelijk bericht- Van: artemis-users-boun...@sanger.ac.uk

[Artemis-users] Artemis and multiple (interactive) annotation tracks

Hi I am playing around again with multiple annotation tracks in Artemis latest version locally... I managed to get BLAST results in the annotation as well as other EMBL FT. I wondered is it possible to get for let's say a limited BLAST to 4 matches each entry, to display all those 4 as

Re: [Artemis-users] Artemis and multiple (interactive) annotation tracks

To: Bossers, Alex; artemis-users@sanger.ac.uk Onderwerp: Re: Artemis and multiple (interactive) annotation tracks Hi Alex I am not sure of the best way to limit the number of hits to an ORF but you may be interested in a new view which is in development at the moment in Artemis. It displays overlapped

Re: [Artemis-users] Artemis and multiple (interactive) annotation tracks

Tim, which FeaTure key would be best to use when wanting hyperlinked db refs? Is there some convention? /db_xref=GI:somenumber? Alex Van: Bossers, Alex Verzonden: woensdag 11 april 2012 22:31 To: Tim Carver; artemis-users@sanger.ac.uk Onderwerp: RE

Re: [Artemis-users] Best way to produce the ACT crunch file?

Abhinay We use MUMmer to generate those comparison files. Scripts available at our free public galaxy instance (http://galaxy.wur.nl) can convert those for you to readable files for ACT. Like WebACT does... Look in the tool section WUR-tools::MUMmer/Artemis. You may find some more handy things