Re: [base] update issue from 2.14.0 to 2.16.1
Oh, silly me. Thanks for pointing at the right direction. Obviously I forgot to set the right environment for the update procedure. For Solaris it's necessary to have this old java version for some os components, otherwise I would have updated the java completely. Thank you for BASE /philipp-- Increase Visibility of Your 3D Game App Earn a Chance To Win $500! Tap into the largest installed PC base get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to basedb-users-requ...@lists.sourceforge.net
Re: [base] update issue from 2.14.0 to 2.16.1
I guess we really should change the compilation to use '-target 1.6' Or simply omit it. In general I can think of few scenarios where you'd want to target an older VM than the one you are working with (one reason might be compiler fixes that were not back-ported): that invites the sort of errors the OP ran into, unless the developer is extremely careful not to use any of the newer functionality. -- O.L. -- Increase Visibility of Your 3D Game App Earn a Chance To Win $500! Tap into the largest installed PC base get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev ___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to basedb-users-requ...@lists.sourceforge.net
Re: [base] update issue from 2.14.0 to 2.16.1
On 2010-11-24 15:10, Olivier Lefevre wrote: I guess we really should change the compilation to use '-target 1.6' Or simply omit it. In general I can think of few scenarios where you'd want to target an older VM than the one you are working with (one reason might be compiler fixes that were not back-ported): that invites the sort of errors the OP ran into, unless the developer is extremely careful not to use any of the newer functionality. I investigated the history of this a bit further and the story is like this: BASE 2.5 only worked with java 1.5 but not with 1.6 due to some issues with webservices. We were developing with 1.5. We started to use java 1.6 for development during BASE 2.6 but still wanted to keep support for java 1.5 since no Mac version of 1.6 existed (we had two developers using Mac). This is when the target 1.5 was added to the build. BASE 2.7 dropped official support for java 1.5 but nobody though of changing the target attribute. I have done this today so it will be fixed in the next BASE release. /Nicklas -- Increase Visibility of Your 3D Game App Earn a Chance To Win $500! Tap into the largest installed PC base get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev ___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to basedb-users-requ...@lists.sourceforge.net
[base] Formula/plugins
Dear team, I used plugins and created Formulas for dataset analysis and its work only with each dataset (bioassay) separately; the result is column (Ch1). Is it possible to make analysis (for example quantile normalization of 3 bioassays, or formula to find mean between bioassay1 (Ch1))and bioassay2 (Ch1)). When i used 3 bioassays for normalization i have result again only one column Ch1 but 3 times longer and analysis was done for each bioassay separately. Did I missed something or I have to develop plugin to operate between bioassays? Regards, Irina -- Increase Visibility of Your 3D Game App Earn a Chance To Win $500! Tap into the largest installed PC base get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to basedb-users-requ...@lists.sourceforge.net
Re: [base] Formula/plugins
On 2010-11-25 04:39, Irina 264 wrote: Dear team, I used plugins and created Formulas for dataset analysis and its work only with each dataset (bioassay) separately; What do you mean with this? What plug-in did you use? What are the formulas? the result is column (Ch1). Is it possible to make analysis (for example quantile normalization of 3 bioassays, or formula to find mean between bioassay1 (Ch1))and bioassay2 (Ch1)). When i used 3 bioassays for normalization i have result again only one column Ch1 but 3 times longer and analysis was done for each bioassay separately. Did I missed something or I have to develop plugin to operate between bioassays? I am not sure I understand what you have done and what you want to do. Can you please explain in more detail? The Lowess and median-ratio normalization that is shipped with BASE only works with 2-channel data so I am not sure which plug-in you have used. /Nicklas -- Increase Visibility of Your 3D Game App Earn a Chance To Win $500! Tap into the largest installed PC base get more eyes on your game by optimizing for Intel(R) Graphics Technology. Get started today with the Intel(R) Software Partner Program. Five $500 cash prizes are up for grabs. http://p.sf.net/sfu/intelisp-dev2dev ___ The BASE general discussion mailing list basedb-users@lists.sourceforge.net unsubscribe: send a mail with subject unsubscribe to basedb-users-requ...@lists.sourceforge.net
