[ccp4bb] ALS Colloquium Seminar Tomorrow - Jennifer Doudna Lecture

2021-10-26 Thread James Holton
Greetings all, This year I have the honor of co-organizing the ALS Colloquium Seminar series. This is normally a local but broad-audience forum for users of the Advanced Light Source to learn more about what other users are doing. But, now that its gone virtual you can all join in and listen

Re: [ccp4bb] Postdoctoral position in structural Biology at the ISMB, London

2021-10-26 Thread jerome.gouge ccp4bb
Dear all, There are only a couple of days left to apply for a 3-year fully funded postdoc position in my lab! You'll be looking at protein and protein/DNA complexes intimately linked to the oxidative stress response. See below for more details. Best wishes, Jerome Le dim. 10 oct. 2021 à 19:00,

[ccp4bb] Postdoctoral Position in Protein Biophysics at UC Davis

2021-10-26 Thread Dylan Murray
Hello Friends: The Murray Laboratory is seeking a postdoctoral associate. Please see the announcement below. Thanks -- Dylan The Murray Laboratory University of California, Davis Department of Chemistry Postdoctoral Opportunity Position Title: Postdoctoral Researcher Location: UC Davis,

[ccp4bb] Molprobity local install issue

2021-10-26 Thread Freddie Martin
Hi All, I hope this is the right place to ask about this. I have tried to use a local installation of molprobity to run batches of files and I get these errors: clashscore test.pdb Warning: ini_set(): Headers already sent. You cannot change the session module's ini settings at this time

Re: [ccp4bb] am I doing this right?

2021-10-26 Thread Marin van Heel
Dear All, In the context of this discussion, I suggest the readers / discussion participants to have a look at new ideas on: Information Content of images, SNR, DQEs, A priori Probabilities, Shannon's Channel Information capacity,etc., expressed in: Van Heel & Schatz, arXiv 2020. (There is also

[ccp4bb] CryoEM Current Practices Webinar - Oct 28, 2021 - Helen Donelic

2021-10-26 Thread Christina Zimanyi
Dear all, Join us this Thursday for the monthly CryoEM Current Practices webinar, hosted by the NIH Transformative High Resolution CryoEM Program Centers. We have another exciting talk this month that dives into the details of cryoEM methods. Time: Thursday, October 28, 2021 at 9 AM pacific /

[ccp4bb] 4-year PhD position in Exeter, UK, in partnership with Syngenta

2021-10-26 Thread Harmer, Nicholas
Dear all, We have a fully funded 4-year PhD position available in my group in Exeter, UK. The position will be using structural and enzymology techniques to study thiamine diphosphate-dependent enzymes. The project is a collaborative project with Syngenta in the UK. The position is open to

[ccp4bb] Post doc position, AstraZeneca Gothenburg

2021-10-26 Thread Sandmark, Jenny
Dear all, We are looking for a Post doc to work on structure-based generation of stabilised peptides mimicking proteins involved in cell signalling. The Post doc will be based at AstraZeneca Gothenburg, Sweden, working with myself and Dr. Anais Noisier and in collaboration with Prof. David

[ccp4bb] Computational modeling job opportunities in the Kosinski lab at EMBL Hamburg

2021-10-26 Thread Jan Kosinski
Dear all, At EMBL Hamburg, we have two job and fellowship opportunities in the area of structural modeling of large protein complexes based on cryo-EM and other data. 1) Scientific Technical Officer to develop and apply computational methods for modeling based on electron microscopy and other

[ccp4bb] Coot Crashing on MacOS 10.10

2021-10-26 Thread Abhishek A. Jalan
Dear all, I installed the ccp4-7.1 and it loads fine but coot crashes with the following error message. I would really appreciate any help. [1m(filter-fileselection-filenames-state) [0m [1m(get-active-map-drag-flag) [0m

Re: [ccp4bb] am I doing this right?

2021-10-26 Thread Jacob Keller
Hi All, haven't been following CCP4BB for a while, then I come back to this juicy Holtonian thread! Sorry for being more practical, but could you use a windowed approach: integrate values of the same pixel/relp combo (roxel?) over time (however that works with frame slicing) to estimate the