Your message dated Tue, 13 Mar 2007 02:17:02 +0000
with message-id <[EMAIL PROTECTED]>
and subject line Bug#401670: fixed in rpy 1.0~rc1-5
has caused the attached Bug report to be marked as done.
This means that you claim that the problem has been dealt with.
If this is not the case it is now your responsibility to reopen the
Bug report if necessary, and/or fix the problem forthwith.
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(administrator, Debian Bugs database)
--- Begin Message ---
Package: python-rpy
Version: 1.0~rc1-2
Severity: normal
Hi,
when I use rpy to plot data with R I get a segfault when the plot output
window is moved slighly outside the visible screen or is hidden by other
windows. Here is an example session that I could use to reproduce the error:
[EMAIL PROTECTED]:~$ python
Python 2.4.4c0 (#2, Jul 30 2006, 15:43:58)
[GCC 4.1.2 20060715 (prerelease) (Debian 4.1.1-9)] on linux2
Type "help", "copyright", "credits" or "license" for more information.
>>> from rpy import *
RHOME= /usr/lib/R
RVERSION= 2.4.0
RVER= 2040
RUSER= /home/hanke
Loading Rpy version 2040 .. Done.
Creating the R object 'r' .. Done
>>> x = range(0, 10)
>>> y = [ 2*i for i in x ]
>>> r.plot_default(x, y)
As long as the output window is in the foreground and not outside the
visible screen everything is ok. But as soon as the window is (partly)
covered by other windows and any action is done to it (move the window,
put in foreground, ...) I get this:
>>> Error during wrapup: C stack usage is too close to the limit
*** caught segfault ***
address (nil), cause 'memory not mapped'
Possible actions:
1: abort (with core dump)
2: normal R exit
3: exit R without saving workspace
4: exit R saving workspace
Selection:
And python dies :(
Best,
Michael
-- System Information:
Debian Release: 4.0
APT prefers testing
APT policy: (600, 'testing'), (200, 'unstable')
Architecture: i386 (i686)
Shell: /bin/sh linked to /bin/bash
Kernel: Linux 2.6.18-1-k7
Locale: LANG=de_DE.UTF-8, LC_CTYPE=de_DE.UTF-8 (charmap=UTF-8)
Versions of packages python-rpy depends on:
ii libc6 2.3.6.ds1-7 GNU C Library: Shared libraries
ii python 2.4.3-11 An interactive high-level object-o
ii python-central 0.5.10 register and build utility for Pyt
ii python-numeric 24.2-7 Numerical (matrix-oriented) Mathem
ii r-base-core 2.4.0.20061103-1 GNU R core of statistical computin
python-rpy recommends no packages.
-- no debconf information
--
GPG key: 1024D/3144BE0F Michael Hanke
http://apsy.gse.uni-magdeburg.de/hanke
ICQ: 48230050
--- End Message ---
--- Begin Message ---
Source: rpy
Source-Version: 1.0~rc1-5
We believe that the bug you reported is fixed in the latest version of
rpy, which is due to be installed in the Debian FTP archive:
python-rpy-doc_1.0~rc1-5_all.deb
to pool/main/r/rpy/python-rpy-doc_1.0~rc1-5_all.deb
python-rpy_1.0~rc1-5_i386.deb
to pool/main/r/rpy/python-rpy_1.0~rc1-5_i386.deb
rpy_1.0~rc1-5.diff.gz
to pool/main/r/rpy/rpy_1.0~rc1-5.diff.gz
rpy_1.0~rc1-5.dsc
to pool/main/r/rpy/rpy_1.0~rc1-5.dsc
A summary of the changes between this version and the previous one is
attached.
Thank you for reporting the bug, which will now be closed. If you
have further comments please address them to [EMAIL PROTECTED],
and the maintainer will reopen the bug report if appropriate.
Debian distribution maintenance software
pp.
Dirk Eddelbuettel <[EMAIL PROTECTED]> (supplier of updated rpy package)
(This message was generated automatically at their request; if you
believe that there is a problem with it please contact the archive
administrators by mailing [EMAIL PROTECTED])
-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Format: 1.7
Date: Mon, 12 Mar 2007 21:06:40 -0500
Source: rpy
Binary: python-rpy python-rpy-doc
Architecture: source i386 all
Version: 1.0~rc1-5
Distribution: unstable
Urgency: low
Maintainer: Dirk Eddelbuettel <[EMAIL PROTECTED]>
Changed-By: Dirk Eddelbuettel <[EMAIL PROTECTED]>
Description:
python-rpy - Python interface to the GNU R language and environment
python-rpy-doc - Python interface to the GNU R language (documentation package)
Closes: 401670
Changes:
rpy (1.0~rc1-5) unstable; urgency=low
.
* src/rpymodule.c: Applied patch (from rpy-list) created by Andrew
McNamara that resolves the C stack limit error produced by R in some
contexts, such as resizing the x11() window. (Closes: #401670)
Files:
765671749eb75900c91405aa46cf5215 725 python optional rpy_1.0~rc1-5.dsc
04bd637fef7fc05cd6c4f6868d253a9e 41586 python optional rpy_1.0~rc1-5.diff.gz
f90bf0b9d5d01a5ef5babd5b4b8796ee 192866 doc optional
python-rpy-doc_1.0~rc1-5_all.deb
a46a7c73b2a05817d78035ff5454aa08 28610 python optional
python-rpy_1.0~rc1-5_i386.deb
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--- End Message ---