Run recon-all on the MNI template, then view your ROI on the output volume,
including the surfaces to verify that the surfaces pass through your ROI. Map
the ROI to the surface using mri_vol2surf with the --regheader option, then map
the surface-ROI to each subject with mris_apply_reg (make
External Email - Use Caution
Dear Freesurfer community,
I have a volumetric roi.nii file created with spm, based on MNI
coordinates from the literature.
My goal is to do a roi analysis in Freesurfer, as I am interested
in correlating the thickness values of this roi with a
