Re: [FRIAM] FRIAM and CAUSALITY (was NOT complexity and emergence)

2007-12-14 Thread Nicholas Thompson
9:20:06 PM Subject: Re: [FRIAM] FRIAM and CAUSALITY (was NOT complexity and emergence) Hi Nick, Given the energy (and time!) apparently available to this thread, it is with some trepidation that I poke my head out of the weeds. (On the other hand, congratulations, Steve). I like your last

Re: [FRIAM] FRIAM and CAUSALITY (was NOT complexity and emergence)

2007-12-12 Thread Robert Holmes
Correct me if I'm wrong Nick, but isn't this all simply a case of hard scientists (physicists, chemists etc.) understanding causality and attributing it appropriately and soft scientists (biologists, ethologists etc.) not? Robert

[FRIAM] FRIAM and CAUSALITY (was NOT complexity and emergence)

2007-12-11 Thread Nicholas Thompson
. complexity and emergence (was: FRIAM and causality) (Glen E. P. Ropella) 2. JungleDisk - Reliable online storage powered by Amazon S3 ? - Jungle Disk (Owen Densmore) 3. Re: JungleDisk - Reliable online storage powered by Amazon S3 (Marcus G. Daniels

Re: [FRIAM] FRIAM and CAUSALITY (was NOT complexity and emergence)

2007-12-11 Thread PPARYSKI
Having, alas, been one of the catalysts for this thread by asking who believes in causality at a FRIAM meeting, I do occasionally agree with Nick and think the thread has wandered, perhaps not emerged. As St. Nick so aptly expressed: it is about repeating patterns. Ultimately deep

Re: [FRIAM] FRIAM and causality

2007-12-09 Thread Phil Henshaw
Glen Marcus, Well, hopefully returning to the main thread. The question seems to concern an observation that information can be 'misused', letting people capitalize on the interesting ways in which 'bad models' don't fit, to display a 'reality' beyond the information which is both verifiably

Re: [FRIAM] FRIAM and causality

2007-12-08 Thread Marcus G. Daniels
Glen wrote: No. Adjusting a rule is entirely different from adjusting a number. The adjustment of a number merely explores a space. A number spectrum does specify/describe a metric. So, for example, adjusting an integer with particular boundaries for the model, say [-10, 100] provides a

Re: [FRIAM] FRIAM and causality

2007-12-08 Thread Phil Henshaw
] explorations: www.synapse9.com -Original Message- From: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Marcus G. Daniels Sent: Saturday, December 08, 2007 12:24 PM To: The Friday Morning Applied Complexity Coffee Group Subject: Re: [FRIAM] FRIAM and causality

Re: [FRIAM] FRIAM and causality

2007-12-07 Thread Phil Henshaw
Glen, Phil Henshaw on 12/06/2007 10:53 AM: The hard part seems to be to take the first dark step to accepting there might be a shape of another form that the measures are missing (like the whole tree or person). It means looking for how to best extend and complete your image based

Re: [FRIAM] FRIAM and causality

2007-12-07 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Phil Henshaw on 12/07/2007 01:42 PM: PH: I was impressed with the clarity of the abstract and their not confusing biology, lab chemistry and computer model references. Figure 1 puzzles me though. I get your suggestion that this shows a way

Re: [FRIAM] FRIAM and causality

2007-12-06 Thread Phil Henshaw
Glen, Excellent! If they're honestly derived from physical things, like network maps, say, every model is going to be both a 'bad' model and a helpful one. The principle comes to this complex statement, yes, but I think also to a simple one that to understand anything you need multiple measures.

Re: [FRIAM] FRIAM and causality

2007-12-06 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Russell Standish on 12/05/2007 04:14 PM: It blocks learning about what we can't write formulas for, though, so I think it should be among the first things to go. What we cannot write formulas for (by which I mean find compressible descriptions

Re: [FRIAM] FRIAM and causality

2007-12-06 Thread Marcus G. Daniels
And in that sense, even if I can't write a formula for tying one's shoes, I can still _learn_ how to tie shoes. Further, I can use the inaccurate (bad) formulas for how to tie one's shoes as a way to actually learn how to tie shoes. Even further, I can _teach_ others how to tie their

Re: [FRIAM] FRIAM and causality

2007-12-06 Thread Russell Standish
On Thu, Dec 06, 2007 at 01:23:00PM -0700, Marcus G. Daniels wrote: And in that sense, even if I can't write a formula for tying one's shoes, I can still _learn_ how to tie shoes. Further, I can use the inaccurate (bad) formulas for how to tie one's shoes as a way to actually learn how

Re: [FRIAM] FRIAM and causality

2007-12-05 Thread Douglas Roberts
Biting my lip over here. [Don't respond...DON'T RESPOND!] -- Doug Roberts, RTI International [EMAIL PROTECTED] [EMAIL PROTECTED] 505-455-7333 - Office 505-670-8195 - Cell On Dec 5, 2007 5:14 PM, Russell Standish [EMAIL PROTECTED] wrote: This is a very Phil Henshaw response - its a bit hard to

Re: [FRIAM] FRIAM and causality

2007-12-05 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 OK. I hope this is the last time I have to break the threading. My upgrade is stalled; so my exim4 should work fine for now. [grin] Phil on Thu Nov 29 at 11:46:09 EST 2007 wrote: Sure, while not discarding too much, and we should still keep the

Re: [FRIAM] FRIAM and causality

2007-12-05 Thread Russell Standish
This is a very Phil Henshaw response - its a bit hard to know how to respond to this. On Thu, Nov 29, 2007 at 10:14:41AM -0500, Phil Henshaw wrote: Russell, That's a sound way to choose the most valuable model of the moment, but it won't help you with what models can't show. You need to

Re: [FRIAM] FRIAM and causality

2007-11-29 Thread Phil Henshaw
: [EMAIL PROTECTED] [mailto:[EMAIL PROTECTED] On Behalf Of Russell Standish Sent: Wednesday, November 28, 2007 8:11 PM To: The Friday Morning Applied Complexity Coffee Group Subject: Re: [FRIAM] FRIAM and causality All scientific models/theories tend to lie on a plane with the axes

Re: [FRIAM] FRIAM and causality

2007-11-27 Thread sy
. Ropella [EMAIL PROTECTED] Date: Mon, 26 Nov 2007 03:51:12 To:The Friday Morning Applied Complexity Coffee Group friam@redfish.com Subject: Re: [FRIAM] FRIAM and causality -BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Günther Greindl on 11/21/2007 04:48 PM: So you probably won't even support sup

Re: [FRIAM] FRIAM and causality

2007-11-27 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 [EMAIL PROTECTED] on 11/27/2007 06:05 AM: Nearly all you say fits closely with my approach, except the word 'any' in the following quote. To the contrary, I assume every actual system has an inherent 'hierarchicability' (following the word

Re: [FRIAM] FRIAM and causality

2007-11-19 Thread Robert Holmes
On Nov 18, 2007 11:58 AM, Nicholas Thompson [EMAIL PROTECTED] wrote: Robert, Does a blank white wall have a pattern on it? Nick Nick - *YES *- Robert FRIAM Applied Complexity Group listserv Meets Fridays 9a-11:30 at cafe at St.

Re: [FRIAM] FRIAM and causality

2007-11-19 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Günther Greindl on 11/17/2007 01:12 PM: Ok - but the gooey glob is also only a description - we can extend the gooey glob to contain the whole universe (the Hubble volume). Would you say that at that level we have total ordering? I CANNOT extend

Re: [FRIAM] FRIAM and causality

2007-11-19 Thread Marcus G. Daniels
Nicholas Thompson wrote: Loosing one's temper is a wonderful example, because it contains all the paradoxes we are discussing and more. You point to loosing temper as if were something knowable in an instant. But the knowledge required to perceive a loosing of temper is smeared across

Re: [FRIAM] FRIAM and causality

2007-11-19 Thread Nicholas Thompson
Subject: Re: [FRIAM] FRIAM and causality On Nov 18, 2007 11:58 AM, Nicholas Thompson [EMAIL PROTECTED] wrote: Robert, Does a blank white wall have a pattern on it? Nick Nick - YES - Robert FRIAM Applied Complexity Group listserv

Re: [FRIAM] FRIAM and causality

2007-11-18 Thread Nicholas Thompson
: RE: [FRIAM] FRIAM and causality Nick, Well, ... You say causation is not the sort of thing one can point to. I can, however, point to my loosing my temper, be readily understood, and surmise accurately that if I had better sense I might say the same things more helpfully without

Re: [FRIAM] FRIAM and causality

2007-11-17 Thread Robert Holmes
On Nov 16, 2007 5:32 PM, Nicholas Thompson [EMAIL PROTECTED] wrote: snip So, in my idiotic postivisitic mode, I assert, that pattern IS what causality is. I mean why would one bother to attribute it anywhere else than where we know it. No it's not Nick, as witnessed by the following

Re: [FRIAM] FRIAM and causality

2007-11-17 Thread Nicholas Thompson
- Original Message - From: Robert Holmes To: The Friday Morning Applied Complexity Coffee Group;[EMAIL PROTECTED] Sent: 11/17/2007 8:47:43 AM Subject: Re: [FRIAM] FRIAM and causality On Nov 16, 2007 5:32 PM, Nicholas Thompson [EMAIL PROTECTED] wrote: snip So, in my idiotic

Re: [FRIAM] FRIAM and causality

2007-11-17 Thread phil henshaw
Applied Complexity Coffee Group Cc: [EMAIL PROTECTED]; [EMAIL PROTECTED]; caleb.thompson mailto:[EMAIL PROTECTED] Sent: 11/16/2007 4:41:46 PM Subject: Re: [FRIAM] FRIAM and causality NIck, Didn't you place the only things that physcally cause anything, the individual hammers and the individual

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Günther Greindl
Hi, That is cause-effect are not chains. They're not total orders. They're not linear or sequential. Every effect has multiple (usually a dense infinity) causes. And every cause has multiple (usually a dense infinity) of effects. And the causes and effects are inextricably intertwined.

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Günther Greindl
Hi Glen, I suspect the orderability only requires partial orders rather than total orders. yes, but relativity implies locality - that means all causes for A and all effects of A would have to be in the past/future light cone. So for the causality at point A you would have total ordering.

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Günther Greindl on 11/16/2007 12:30 PM: I suspect the orderability only requires partial orders rather than total orders. yes, but relativity implies locality - that means all causes for A and all effects of A would have to be in the

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Marcus G. Daniels
Glen E. P. Ropella wrote: Granted, one can hyper-focus some observation so as to artificially label some slice of the situation and call that slice the unit A. But, that's an act of either description or prescription and is merely a _model_ of the situation (often an impoverished one at that).

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Nicholas Thompson
and this nail in this instance. All the best, Nick - Original Message - From: Phil Henshaw To: [EMAIL PROTECTED];The Friday Morning Applied Complexity Coffee Group Cc: [EMAIL PROTECTED]; [EMAIL PROTECTED]; caleb.thompson Sent: 11/16/2007 4:41:46 PM Subject: Re: [FRIAM] FRIAM

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Marcus G. Daniels
Glen E. P. Ropella wrote: I don't imply that approximations cannot be obtained by taking various slices of X {x1, ..., xn} and Y {y1, ..., ym} and examining the sub-inference from xi - yj. But, there will always be room for skepticism that your particular slices adequately capture the cause

Re: [FRIAM] FRIAM and causality

2007-11-16 Thread Glen E. P. Ropella
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Marcus G. Daniels on 11/16/2007 04:35 PM: A model either gives an edge on prediction or it doesn't. It is quantifiable provided there is consensus on the available variety of available input and output measurements and many such measurements.

Re: [FRIAM] FRIAM and causality

2007-11-13 Thread Eric Smith
PROTECTED] To: [EMAIL PROTECTED]; The Friday Morning Applied Complexity Coffee Group friam@redfish.com Date: 11/12/2007 1:29:08 PM Subject: Re: [FRIAM] FRIAM and causality Hi Nick, I assume you already know about the work Judea Pearl did to define a notion of causality in the context

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Phil Henshaw
]; caleb.thompson Subject: [FRIAM] FRIAM and causality “The truth arises from arguments amongst friends” -- David Hume One of my goals at Friam, believe it or not, is actually to get some fundamental issues settled amongst us. We had, last week, a brisk discussion about causality. I don’t

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Carl Tollander
At that same session, I was going on about the Kochen-Specker theorem, asking for references, on the basis of Baez's comment about it in This Week's Finds at http://www.math.ucr.edu/home/baez/week257.html. He was discussion some ideas around the concept of a topos: It basically means this:

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread PPARYSKI
I prefer Baez's Diamonds and Rust - great causality. Paul ** See what's new at http://www.aol.com FRIAM Applied Complexity Group listserv Meets Fridays 9a-11:30 at cafe at St. John's College

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Eric Smith
Hi Nick, I assume you already know about the work Judea Pearl did to define a notion of causality in the context of inference on Boolean networks? I don't have citations on this, because I only learned about it recently in someone's talk, but I gather it is fairly widely known. Happily it doesn't

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Carl Tollander
So she seems to be saying that developing systems, at our scale, as they acquire experience/structure, regularly encounter coupled pairs of observables that cannot be simultaneously measured to 'high' precision? Pioneering work, indeed, but challenging for the modeler! Certainly messes with

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Nicholas Thompson
Sent: 11/12/2007 5:53:01 AM Subject: RE: [FRIAM] FRIAM and causality But the question you posed wasn't whether you could make a subject trivial, which anyone can do with any subject I think, but whether you can make it meaningful.Can causality be meaningful is a much more open question

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Nicholas Thompson
PROTECTED]; The Friday Morning Applied Complexity Coffee Group friam@redfish.com Date: 11/12/2007 1:29:08 PM Subject: Re: [FRIAM] FRIAM and causality Hi Nick, I assume you already know about the work Judea Pearl did to define a notion of causality in the context of inference on Boolean networks? I

Re: [FRIAM] FRIAM and causality

2007-11-12 Thread Marcus G. Daniels
Nicholas Thompson wrote: Let's try this: To say that a probability attaches to an event at an instant is to commit this fallacy. What we know is a past relative frequency of relevant conditions and relevant consequences. Instantaneous probability is a fiction. Cause is just another