Re: [gentoo-cluster] sci-biology ebuilds [WAS] RSH/SSH? (Solution)

2005-11-16 Thread Donnie Berkholz
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Brady Catherman wrote: | BTW, are you guys looking for other commonly (or in some cases.. ultra | rarely) used science/biology ebuilds? I have built something like a | dozen for the utilities that we use in house here. That might find more talk on

Re: [gentoo-cluster] Gentoo clustering à l a www.clustermatic.org (PXE booted nodes )

2005-11-17 Thread Donnie Berkholz
Eric Thibodeau wrote: The way I see it, multiple Gentoo roots would be available (different machine profiles/optimisation) and they would be specified in the DHCP server's config file as simply as any PXE entry So I am not too sure I understand your couple of ROOT=/foo _and_ the busybox

Re: [gentoo-cluster] Gentoo clustering à la www. clustermatic.org (PXE booted nodes)

2005-11-19 Thread Donnie Berkholz
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Mathias Weigt wrote: | Donnie Berkholz wrote: | What exactly do you want more detail about? | | | They boot to an initrd containing busybox, then proceed to mount | necessary bits from a read-only NFS export and other bits via tmpfs | where they need

Re: [gentoo-cluster] Gentoo clustering à l a www.clustermatic.org (PXE booted nodes )

2005-11-21 Thread Donnie Berkholz
-BEGIN PGP SIGNED MESSAGE- Hash: SHA1 Stéphane Lacasse wrote: | Like you said, it's beside the point, but I think you could take a look | at their design and draw some inpirations from it. An easy install like | Rock Cluster but instead of using Kickstart(tm) files, would use the |

Re: [gentoo-cluster] Install on a headless XServe?

2006-01-20 Thread Donnie Berkholz
Brady Catherman wrote: My next step was to take the live CD and try to modify it. The live CD needs two things enabled in order to consider it ready for use on a headless XServe G5. It needs to enable the serial console by default, and it needs fusion MPT support. Might be nice to search

Re: [gentoo-cluster] Switchable MPI

2006-02-12 Thread Donnie Berkholz
Andrew D. Fant wrote: I'll dig around and forward the ebuild to the list later tonight or tomorrow. At the risk of going off on a rant, I think that the /etc/env.d model is a core part of the problem. If two users want to use two different mpi implementations, will eselect allow them to both

Re: [gentoo-cluster] High-Availability Howto for Gentoo

2006-04-11 Thread Donnie Berkholz
Ramon van Alteren wrote: Suggest we pick one of the usual free licenses (maybe the same as the gentoo documentation project uses ?) Please! Otherwise we can never incorporate the material into any official documentation. Thanks, Donnie signature.asc Description: OpenPGP digital signature

Re: [gentoo-cluster] High-Availability Howto for Gentoo

2006-04-11 Thread Donnie Berkholz
Brady Catherman wrote: One last question for you all.. Why is distcc so popular? We used it on our 134 node cluster and it actually made compiling much slower than just running it on one of the nodes. The network overhead killed the performance gain. The only way we found that it helped was

Re: [gentoo-cluster] Gentoo vs RedHat cluster

2006-04-11 Thread Donnie Berkholz
Brady Catherman wrote: So the short of it is that higher is always better, and this is only a 'best as I personally' could do comparison. OK, thanks for the clarification. Have you also run lmbench? After our conversion things went together much smoother and now maintenance is fairly

Re: [gentoo-cluster] Docs

2006-06-16 Thread Donnie Berkholz
Donnie Berkholz wrote: We used to have some documentation floating around, but it never got put on the Gentoo site and converted to GuideXML. I think there was a filesystem selection guide and a Heartbeat/DRBD howto, maybe something else. I'm poking the author to see whether he can dig them up

[gentoo-cluster] Adapting java-config for mpi-config

2006-06-18 Thread Donnie Berkholz
This message about java-config just passed across gentoo-dev. Apparently it can switch both on a system and a user level, so it may be worth looking into for adapting to mpi-config. Thanks, Donnie Original Message Subject: [gentoo-dev] Changes to the way Java packages are built

Re: [gentoo-cluster] openib

2006-09-09 Thread Donnie Berkholz
Hanni Ali wrote: I feel it would be sensible to have a gentoo cluster overlay for all clustering and grid related software, would be useful for testing and collaboration. http://overlays.gentoo.org/ http://overlays.gentoo.org/ There's already some stuff in the gentoo science overlay [1].

Re: [gentoo-cluster] openib in science overlay

2006-11-02 Thread Donnie Berkholz
Bryan Green wrote: Thats great to hear. Consider them a work in progress. They work great for me, and I've only tested them on amd64. I'd be happy to get feedback, including fixes/additions. Bug me on IRC sometime and I'll look them over with you. I'm pretty busy today though. Thanks,

Re: [gentoo-cluster] examples of (large) Gentoo clusters

2006-12-02 Thread Donnie Berkholz
Bryan Green wrote: Yes, I actually used those ebuilds to test Lustre on our mini 3x3 hyperwall which runs Gentoo. I was able to get it working, but over here they want the supported, released version, whereas those ebuilds are for the beta. I tried to install the released version, but

Re: [gentoo-cluster] examples of (large) Gentoo clusters

2006-12-04 Thread Donnie Berkholz
Bryan Green wrote: Donnie Berkholz writes: I guess that means we should get in touch with them to get on the supported systems list. =) Sounds like a fine idea to me. :) I talked to someone there at SC06, but they did not sound terribly open to the idea of directing precious resources

Re: [gentoo-cluster] examples of (large) Gentoo clusters

2006-12-08 Thread Donnie Berkholz
John R. Dunning wrote: From: Bryan Green [EMAIL PROTECTED] A longer term solution is to do some combination of remodularizing vfs and recasting the lustre stuff so as to depend less on getting its fingers into the guts. I once spent some time looking into that, and I do believe it's

[gentoo-cluster] Herd split? hac-cluster and hpc-cluster

2006-12-10 Thread Donnie Berkholz
We might benefit from splitting the clustering packages into two separate groups for high-availability and high-performance computing. This will help to keep the bugs a bit cleaner so each group of folks will have a clearer idea of what they need to do. Does anyone else have thoughts on this?

Re: [gentoo-cluster] Herd split? hac-cluster and hpc-cluster

2006-12-11 Thread Donnie Berkholz
Andrew D. Fant wrote: Donnie Berkholz wrote: We might benefit from splitting the clustering packages into two separate groups for high-availability and high-performance computing. This will help to keep the bugs a bit cleaner so each group of folks will have a clearer idea of what they need

Re: [gentoo-cluster] Herd split? hac-cluster and hpc-cluster

2006-12-11 Thread Donnie Berkholz
Philipp Riegger wrote: On Dec 11, 2006, at 9:11 AM, Donnie Berkholz wrote: Does anyone else have thoughts on this? I think, hac-cluster and hpc-cluster sound strange, since c in hpc and hac already stands for cluster. or computing... -- gentoo-cluster@gentoo.org mailing list

Re: [gentoo-cluster] gentoo 2006.1 + openmosix-sources-2.6.12.r577 + openmosix-user?

2006-12-21 Thread Donnie Berkholz
Hanni Ali wrote: ok so follow the hpc how to: http://www.gentoo.org/doc/en/hpc-howto.xml but modify for diskless which you seem to have got the hang of. FWIW, I've got plans to put together a doc for a clean setup of a diskless cluster. I'm unhappy with our clustering documentation, although

Re: [gentoo-cluster] SCIRE Project

2007-02-13 Thread Donnie Berkholz
Daniel van Ham Colchete wrote: I would like the deployment and maintenance to be done as easily as possible because this project needs to be scalable to more than 100 servers. Although we are going to install only 10 servers in the beginning, my boss says that I should be prepared for this

Re: [gentoo-cluster] SCIRE Project

2007-02-14 Thread Donnie Berkholz
C. Bergström wrote: I've uploaded my rough outline of what I have so far to a google doc and started #gentoo-deploy on freenode for anyone interested in working together on this. I'd like if you guys could stick in #gentoo-cluster instead of a new IRC channel, it's relevant to everyone in

Re: [gentoo-cluster] SCIRE Project

2007-02-15 Thread Donnie Berkholz
C. Bergström wrote: Donnie Berkholz wrote: C. Bergström wrote: I've uploaded my rough outline of what I have so far to a google doc and started #gentoo-deploy on freenode for anyone interested in working together on this. I'd like if you guys could stick in #gentoo-cluster instead of a new

Re: [gentoo-cluster] Porting RH gfs-deploy-tool to Gentoo

2007-03-26 Thread Donnie Berkholz
C. Bergström wrote: I'm trying to really clean up my cluster deployment and while looking at GFS came across this. http://people.redhat.com/rkenna/gfs-deploy-tool/html.doc/ My first thoughts are of course switching out the dependency to pull rpms from the rh network to PORTAGE_BINHOST..

Re: [gentoo-cluster] Network Booting

2008-01-25 Thread Donnie Berkholz
On 09:31 Fri 25 Jan , Ramon van Alteren wrote: I remember seeing a demo from yamin at a gentoo UK conference demoing netbooting with a genkernel kernel That's the genkernel-4 code. I've used it for diskless setups and it works quite nicely. It's living on gentooexperimental.org at the

[gentoo-cluster] [EMAIL PROTECTED]: RE: Linux/Cluster/Grid Project Leader]

2008-06-13 Thread 'Donnie Berkholz'
: Darryl Coburn [EMAIL PROTECTED] To: 'Donnie Berkholz' [EMAIL PROTECTED] Subject: RE: Linux/Cluster/Grid Project Leader Date: Sun, 8 Jun 2008 22:51:15 -0600 Thanks Donnie, that would be great. Do you need anything from me? Darryl Coburn 630-573-5050 ext. 340 office 708-767-6367

[gentoo-cluster] Fwd: Gentoo cluster list

2009-01-31 Thread Donnie Berkholz
, Donnie Donnie Berkholz Developer, Gentoo Linux Blog: http://dberkholz.wordpress.com pgpu0LiFmDtFM.pgp Description: PGP signature