Re: [HCP-Users] HCP Pipelines BIDS App

Hi, I release a new version with a bugfix: v3.17.0-14. Please give it a try, Best, Chris On Thu, Jun 22, 2017 at 1:43 PM, Chris Gorgolewski < krzysztof.gorgolew...@gmail.com> wrote: > On Thu, Jun 22, 2017 at 4:04 PM, wrote: > >> Hi Chris, >> >> Thank you for your

Re: [HCP-Users] pipeline structural PostFreesurfer wmparc not found

thank you very much!I have the standard Freesurfer version! I m going to try to the HCP one now! Maria Luisa Mandelli, PhD Assistant Professional Researcher University of California, San Francisco 675 Nelson Rising Lane, Suite 190 | San Francisco, CA 94158 Language Neurobiology Lab

[HCP-Users] harmonizing data

I have a question/request that I know is unusual but that I'm hoping you'll consider. I help to lead a small group of researchers at the Minnesota Center for Twin and Family Research at the University of Minnesota interested in understanding effects of substance use and abuse on brain development

Re: [HCP-Users] pipeline structural PostFreesurfer wmparc not found

Many of the HCP experts are at OHBM, so replies might take longer. I know from my own experience with HCP output to look here for the Freesurfer subject directories: subject-id/T1w/subject-id/label/* subject-id/T1w/subject-id/mri/* subject-id/T1w/subject-id/surf/* … Also see page 21 here:

[HCP-Users] pipeline structural PostFreesurfer wmparc not found

Hi! I m running the structural HCP pipeline and I m using Freesurfer v5.3 It seems that the job finished without errors but I dont see the files in the T1w folder of the subject. For example the wmparc_1mm files I m not sure where is the problem! Thank you Maria Luisa Mandelli, PhD Assistant