Dear HCPs,
Hi,
I want to use the grayordinate timeseries in tfMRI which are preprocessed
with level 1, (which includes smoothing and temporal filtering). So, is
tfMRI_WM_RL_Atlas.dtseries.nii in
SubjectsID/MNINonLinear/Results/tfMRI_WM_RL/ both minimally preprocessed
and level 1 preprocessed? If
Hi Mahshid,
We are not releasing the run-level (Level1) task processed data -- only the Level2 data, which effectively averages the two runs for each task and subject. To use the level1.fsf to generate the Level1 results on the grayordinate/CIFTI data involves
transforming the CIFTI into
Is there a reason you need the level1 results or can you just use the level2 results? If the problem is the smoothing that was already applied, the new release will not have that.
Peace,
Matt.
From: Harms, Michael mha...@wustl.edu
Date: Friday, May 2, 2014 at 3:00 PM
To: Mahshid Najafi
Hi! I had a question about -cifti-roi-average. I can only make it work with a
metric ROI file, like this:
-cifti-roi-average ${subj}.MyelinMap_BC.native.dscalar.nii ROI_mm_avg.txt
-left-roi ROI_23.L.native.func.gii
but not a cifti ROI file, regardless if it is a 1 ROI file or has multiple
This feature has already been requested for this command.
Peace,
Matt.
On 5/2/14, 3:21 PM, Gaurav Patel gauravpa...@gmail.com wrote:
Hi! I had a question about -cifti-roi-average. I can only make it work
with a metric ROI file, like this:
-cifti-roi-average
I want to use the time series, not the contrasts for now. So I am not sure
if the timeseries are provided in level 2? Because I could only find
SubjID_tfMRI_WM_level2_hp200_s4.dscalar.nii which seems to be the contrasts
between the conditions. and also would you please let me know which
Hi Ikko,
The Freesurfer-derived volumes and average thickness of the Desikan ROI parcels
(e.g. right cuneus) for the individual subjects are also included in the
behavioral data that you downloaded as a CSV (from Quick Downloads).
You can also browse these measures by subject in the
If you want the tfMRI .dtseries.nii you need to download the appropriate fMRI minimally preprocessed packages (not the tfMRI analysis packages).
Peace,
Matt.
From: Mahshid mhs...@gmail.com
Date: Friday, May 2, 2014 at 3:36 PM
To: Matt Glasser glass...@wusm.wustl.edu
Cc: Harms, Michael
Ok thanks!
_
gaurav patel
gauravpa...@gmail.com
www.neurofreak.com
On May 2, 2014, at 4:24 PM, Glasser, Matthew glass...@wusm.wustl.edu
wrote:
This feature has already been requested for this command.
Peace,
Matt.
On 5/2/14, 3:21 PM, Gaurav Patel
